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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

(last updated: Oct 12, 2019)

Physical Resource or Software Tool Software

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Resource NameResource TypeDescriptionKeywordsResource IDProper CitationParent OrganizationRelated ConditionFunding AgencyRelationReferenceWebsite StatusAlternate IDsAlternate URLsOld URLs
Research Collaboratory for Structural Bioinformatics Protein Data BankResource, service resource, data or information resource, databaseCollection of structural data of biological macromolecules. Database of information about 3D structures of large biological molecules, including proteins and nucleic acids. Users can perform queries on data and analyze and visualize results.3-dimensional, annotation, molecule, nucleic acid, protein, visualization, sequence, function, macromolecule, ligand, model, dna, x-ray crystallography, ribosome, structure, oncogene, nucleic acids, molecular structure, cryomicroscopy, gold standardSCR_012820(Research Collaboratory for Structural Bioinformatics Protein Data Bank, RRID:SCR_012820) Rutgers University; New Jersey; USA , University of California at San Diego; California; USA DOE, NIH, NSFrelated to: pdb-data, PDB2MultiGif, GlyProt, pdb-care, pdb2linucs, GlyVicinity, GlyTorsion, GlySeq, AffinDB, StatAlign, Community Structure-Activity Resource, Binding MOAD, ConSurf Database, glycosciences.de, DOMINE: Database of Protein Interactions, Jenalib: Jena Library of Biological Macromolecules, SynSysNet, EMDataBank.org: Unified Data Resource for Cryo Electron Microscopy, PDBe - Protein Data Bank in Europe, TFinDIT, HOLLOW, ccPDB - Compilation and Creation of datasets from PDB, DOMMINO - Database Of MacroMolecular INteractiOns, InterEvol database, Polbase, PoSSuM, ProtChemSI, RNA CoSSMos, PDBsum, Worldwide Protein Data Bank , canSAR, CAPS Database, Dockground: Benchmarks, Docoys, Templates, and other knowledge resources for DOCKING, Combinatorial Extension (CE), Metalloprotein Site Database, PDBj - Protein Data Bank Japan, Statistical Torsional Angles Potentials of NMR Refinement Database, Metalloprotein Ligand Interaction Database, CARP, PDBTM, RNA FRABASE - RNA FRAgments search engine and dataBASE, AmiGO, ConsensusPathDB, Biological Magnetic Resonance Data Bank, DDBJ - DNA Data Bank of Japan, FlyMine, NCBI Protein, NCBI Nucleotide, FunTree, IndelFR - Indel Flanking Region Database, NMR Restraints Grid, Enzyme Structures Database, Electron Microscopy Data Bank at PDBe, Worldwide Protein Data Bank , DDBJ - DNA Data Bank of Japan, PDBe - Protein Data Bank in Europe, MINAS - Metal Ions in Nucleic AcidS, RCSB PDB, PDBj - Protein Data Bank Japan, used by: SGC, Ligand Expo , DARC - Database for Aligned Ribosomal Complexes, FireDB, Protein Data Bank Bind Database, Protein Data Bank Site, NIF Data Federation, ChannelPedia, MobiDB, Protein Database, listed by: re3data.org, affiliated with: EMDataBank.org: Unified Data Resource for Cryo Electron Microscopy, ConSurf-DB, works_with: CellPhoneDBPMID:12037327Last checked upnif-0000-00135, SCR_017379http://www.rcsb.org, http://www.pdb.org
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