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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

(last updated: Oct 12, 2019)

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41 Results - per page

Resource NameResource TypeDescriptionKeywordsResource IDProper CitationParent OrganizationRelated ConditionFunding AgencyRelationReferenceWebsite StatusAlternate IDsAlternate URLsOld URLs
University of Colorado Boulder; Colorado; USAOrganization, degree granting program, training resourcePublic university that offers degrees in the sciences, humanities, and social sciences.university, research university, public university, colorado, degreeSCR_003114(University of Colorado Boulder; Colorado; USA, RRID:SCR_003114)University of Colorado; Colorado; USA related to: Beta Cell Biology ConsortiumLast checked upnlx_10266
Massachusetts Institute of Technology; Massachusetts; USAOrganization, degree granting program, training resourceIndependent, coeducational, privately endowed university, organized into five schools: architecture and planning; engineering; humanities, arts, and social sciences; management; and science.university, architecture, planning, engineering, humanities, arts, social sciences, management, science school, massachusetts institute, coeducation, independentSCR_000977(Massachusetts Institute of Technology; Massachusetts; USA, RRID:SCR_000977)related to: Charles Stark Draper Laboratory, Beta Cell Biology Consortium , ShareLaTeX, uses: ShareLaTeX, Overleaf, ReadCube, Scizzle, Paperpile, GenomeCompiler, affiliated with: Broad InstituteLast checked upnlx_32884
Howard Hughes Medical InstituteOrganization, organization portal, portal, institution, data or information resourceNonprofit medical research organization that ranks as one of the nation's largest philanthropies for advancing biomedical research and science education in the United States. Known for its scientific research and modern architecture.institution, medical, research, nonprofit, biomedical, USASCR_011281(Howard Hughes Medical Institute, RRID:SCR_011281)United States Department of Health and Human Services granting agency related to: Beta Cell Biology Consortium , FalconLast checked upnlx_98347
Stanford University; Stanford; CaliforniaOrganization, undergraduate program resource, graduate program resource, degree granting program, training resourcePrivate, non profit university in Stanford, California, USA for research and undergraduate and graduate studies. Known for its academic strength, wealth, proximity to Silicon Valley, and ranking as one of the world's top universities. Particularly noted for its entrepreneurship and is one of the most successful universities in attracting funding for start-ups.private, university, institution, undergraduate, program, resource, graduateSCR_011538(Stanford University; Stanford; California, RRID:SCR_011538)related to: Stanford Research Institute International, Alzheimers Disease Genetics Consortium, Beta Cell Biology Consortium , Clinical and Translational Science Awards Consortium, ShareLaTeX, LabArchives, uses: ShareLaTeX, ReadCube, Scizzle, Sparrho, GenomeCompiler, LabArchives, affiliated with: Integrative Human Microbiome Project, Diabetes Epigenome AtlasLast checked upnlx_44253
University of California at San Francisco; California; USAOrganization, university, institutionPublic research university in San Francisco, California. Part of University of California system. Dedicated entirely to health sciences. Major center of medical and biological research and teaching. Ranked as one of top universities in biomedical field in USA and around world.institution, university, health science, medical, biological, teaching, center, biomedicalSCR_010605(University of California at San Francisco; California; USA, RRID:SCR_010605)University of California; California; USA related to: NCIRE, ONE Study, Alzheimers Disease Genetics Consortium, Beta Cell Biology Consortium , Clinical and Translational Science Awards Consortium, affiliated with: Diabetes Research CentersLast checked upnlx_57854
Harvard University; Cambridge; United StatesOrganization, university, institutionInstitution of higher education in the United States. Private Ivy League research university in Cambridge, Massachusetts.research, private, undergraduate, graduate, master's, doctoral, phD, institution, universitySCR_011273(Harvard University; Cambridge; United States, RRID:SCR_011273)related to: Beta Cell Biology Consortium , ShareLaTeX, CalR, dcmqi, uses: ShareLaTeX, Overleaf, ReadCube, DIRECT2experts, Benchling, Writefull, Paperpile, GenomeCompiler, affiliated with: Broad InstituteLast checked upnlx_90063, SCR_016676
Indiana University; Indiana; USAOrganization, university, institutionPublic research university in Indiana. Has 8 statewide campuses known for innovation, creativity, and academic freedom.SCR_011294(Indiana University; Indiana; USA, RRID:SCR_011294)related to: Alzheimers Disease Genetics Consortium, Beta Cell Biology Consortium, affiliated with: Big Ten Cancer Research Consortium, Diabetes Research CentersLast checked upnlx_87622
University of California at San Diego; California; USAOrganization, university, institutionThe University of California, San Diego, also known as UC San Diego, is public research university located in the La Jolla neighborhood of San Diego, California, in the United States. Established in 1960, UCSD has 6 different campuses.undergraduate, graduate, master's, doctoral, phD, institution, universitySCR_011625(University of California at San Diego; California; USA, RRID:SCR_011625)University of California; California; USA related to: Alzheimers Disease Genetics Consortium, International AMD Genetics Consortium, Beta Cell Biology Consortium , Clinical and Translational Science Awards Consortium, Collaboratory of AIDS Researchers for Eradciation (CARE), redcap-to-nda, auto-scoring, FIONASITE, Minimally-Processed-Image-Sharing, timeline-followback, little-man-task, redcap-completion, eprime-data-clean, Fast-Track-Image-Sharing, simple-t1-motion-detection, tick-tock, FIONA-QC-PHANTOM, numerical-fitting, aux-file-upload, FIONA-protocol-compliance, redcap-hook-framework, nih-ipad-app-end-point, ABCDreport, delay-discounting, redcap-importer, pearson-central-end-point, abcd-dev, LungMap, affiliated with: Diabetes Research CentersLast checked upnlx_71933
University of Copenhagen; Copenhagen; DenmarkOrganization, university, institutionUniversity and research institution in Denmark founded in 1479. Member of the International Alliance of Research Universities, along with University of Cambridge, Yale University, The Australian National University, and UC Berkeley.SCR_011627(University of Copenhagen; Copenhagen; Denmark, RRID:SCR_011627)related to: European Gram Negative AntiBacterial Engine, ORBITO, Beta Cell Biology Consortium , EMIFLast checked upnlx_26520
Icahn School of Medicine at Mount Sinai; New York; USAOrganization, university, training resource, institution, medical school program resource, degree granting programIcahn School of Medicine at Mount Sinai, formerly Mount Sinai School of Medicine, is graduate medical school in Manhattan, New York City. Leader in medical and scientific training and education, biomedical research and patient care.medicine, medical, school, university, doctorate, phdSCR_005793(Icahn School of Medicine at Mount Sinai; New York; USA, RRID:SCR_005793)related to: Alzheimers Disease Genetics Consortium, Beta Cell Biology Consortium , Clinical and Translational Science Awards Consortium, Drug Gene Budger, proMODMatcher, uses: Scizzle, affiliated with: BioJupiesLast checked upnlx_55912
Karolinska Institutet; Stockholm; SwedenResource, continuing medical education, degree granting program, training resourceMedical university in Stockholm, Sweden that offers more than fifty disciplines of medicine for study.medicine, medical, sweden, professional school, degree, education, instituteSCR_001548(Karolinska Institutet; Stockholm; Sweden, RRID:SCR_001548)related to: Beta Cell Biology Consortium , EARIP, EU-AIMS, Kidney Health Initiative, MIP-DILI, NEWMEDS, PRECISESADS, EMIF, LifeGene, Linnarsson lab Mouse Brain Atlas, uses: ReadCube, ScizzleLast checked upnlx_41870
dkCOIN Resource, data or information resource, resource, databaseTHIS RESOURCE IS NO LONGER IN SERVICE, documented October 13, 2014. The resource has moved to the NIDDKInformation Network (dkNET) project. Contact them at info_at_dknet.org with any questions. Database of large pools of data relevant to the mission of NIDDKwith the goal of developing a community-based network for integration across disciplines to include the larger DKuniverse of diseases, investigators, and potential users. The focus is on greater use of this data with the objective of adding value by breaking down barriers between sites to facilitate linking of different datasets. To date (2013/06/10), a total of 1,195 resources have been associated with one or more genes. Of 11,580 total genes associated with resources, the ten most represented are associated with 359 distinct resources. The main method by which they currently interconnect resources between the providers is via EntrezGene identifiers. A total of 780 unique genes provide the connectivity between 3,159 resource pairs across consortia. To further increase interconnectivity, the groups have been further annotating their data with additional gene identifiers, publications, and ontology terms from selected Open Biological and Biomedical Ontologies (OBO).gene, adenovirus construct, antibody, co-immunoprecipitation, embryonic stem cell line, functional genomics, histology, mouse strain, pcr primer, protocol, real time pcr, metadata, diabetes, stem cell, metabolism, tissue development, web service, cloud, embryonic stem cellSCR_004438( dkCOIN , RRID:SCR_004438)NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases NIDDKrelated to: Beta Cell Biology Consortium , NIDDK Information Network, National Mouse Metabolic Phenotyping Centers , Nuclear Receptor Signaling Atlas , Diabetic Complications Consortium , T1DBase , OBO, used by: NIF Data Federation, submitted by: NIDDK Information NetworkLast checked downnlx_44256
Integrated Manually Extracted AnnotationResource, data set, data or information resourceA virtual database of annotations made by 50 database providers (April 2014) - and growing (see below), that map data to publication information. All NIF Data Federation sources can be part of this virtual database as long as they indicate the publications that correspond to data records. The format that NIF accepts is the PubMed Identifier, category or type of data that is being linked to, and a data record identifier. A subset of this data is passed to NCBI, as LinkOuts (links at the bottom of PubMed abstracts), however due to NCBI policies the full data records are not currently associated with PubMed records. Database providers can use this mechanism to link to other NCBI databases including gene and protein, however these are not included in the current data set at this time. (To view databases available for linking see, http://www.ncbi.nlm.nih.gov/books/NBK3807/#files.Databases_Available_for_Linking ) The categories that NIF uses have been standardized to the following types: * Resource: Registry * Resource: Software * Reagent: Plasmid * Reagent: Antibodies * Data: Clinical Trials * Data: Gene Expression * Data: Drugs * Data: Taxonomy * Data: Images * Data: Animal Model * Data: Microarray * Data: Brain connectivity * Data: Volumetric observation * Data: Value observation * Data: Activation Foci * Data: Neuronal properties * Data: Neuronal reconstruction * Data: Chemosensory receptor * Data: Electrophysiology * Data: Computational model * Data: Brain anatomy * Data: Gene annotation * Data: Disease annotation * Data: Cell Model * Data: Chemical * Data: Pathways For more information refer to Create a LinkOut file, http://neuinfo.org/nif_components/disco/interoperation.shtm Participating resources ( http://disco.neuinfo.org/webportal/discoLinkoutServiceSummary.do?id=4 ): * Addgene http://www.addgene.org/pgvec1 * Animal Imaging Database http://aidb.crbs.ucsd.edu * Antibody Registry http://www.neuinfo.org/products/antibodyregistry/ * Avian Brain Circuitry Database http://www.behav.org/abcd/abcd.php * BAMS Connectivity http://brancusi.usc.edu/ * Beta Cell Biology Consortium http://www.betacell.org/ * bioDBcore http://biodbcore.org/ * BioGRID http://thebiogrid.org/ * BioNumbers http://bionumbers.hms.harvard.edu/ * Brain Architecture Management System http://brancusi.usc.edu/bkms/ * Brede Database http://hendrix.imm.dtu.dk/services/jerne/brede/ * Cell Centered Database http://ccdb.ucsd.edu * CellML Model Repository http://www.cellml.org/models * CHEBI http://www.ebi.ac.uk/chebi/ * Clinical Trials Network (CTN) Data Share http://www.ctndatashare.org/ * Comparative Toxicogenomics Database http://ctdbase.org/ * Coriell Cell Repositories http://ccr.coriell.org/ * CRCNS - Collaborative Research in Computational Neuroscience - Data sharing http://crcns.org * Drug Related Gene Database https://confluence.crbs.ucsd.edu/display/NIF/DRG * DrugBank http://www.drugbank.ca/ * FLYBASE http://flybase.org/ * Gene Expression Omnibus http://www.ncbi.nlm.nih.gov/geo/ * Gene Ontology Tools http://www.geneontology.org/GO.tools.shtml * Gene Weaver http://www.GeneWeaver.org * GeneDB http://www.genedb.org/Homepage * Glomerular Activity Response Archive http://gara.bio.uci.edu * GO http://www.geneontology.org/ * Internet Brain Volume Database http://www.cma.mgh.harvard.edu/ibvd/ * ModelDB http://senselab.med.yale.edu/modeldb/ * Mouse Genome Informatics Transgenes ftp://ftp.informatics.jax.org/pub/reports/MGI_PhenotypicAllele.rpt * NCBI Taxonomy Browser http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html * NeuroMorpho.Org http://neuromorpho.org/neuroMorpho * NeuronDB http://senselab.med.yale.edu/neurondb * SciCrunch Registry http://neuinfo.org/nif/nifgwt.html?tab=registry * NIF Registry Automated Crawl Data http://lucene1.neuinfo.org/nif_resource/current/ * NITRC http://www.nitrc.org/ * Nuclear Receptor Signaling Atlas http://www.nursa.org * Olfactory Receptor DataBase http://senselab.med.yale.edu/ordb/ * OMIM http://omim.org * OpenfMRI http://openfmri.org * PeptideAtlas http://www.peptideatlas.org * RGD http://rgd.mcw.edu * SFARI Gene: AutDB https://gene.sfari.org/autdb/Welcome.do * SumsDB http://sumsdb.wustl.edu/sums/ * Temporal-Lobe: Hippocampal - Parahippocampal Neuroanatomy of the Rat http://www.temporal-lobe.com/ * The Cell: An Image Library http://www.cellimagelibrary.org/ * Visiome Platform http://platform.visiome.neuroinf.jp/ * WormBase http://www.wormbase.org * YPED http://medicine.yale.edu/keck/nida/yped.aspx * ZFIN http://zfin.orgbiomedical, bibliographic, linkout, literatureSCR_008876(Integrated Manually Extracted Annotation, RRID:SCR_008876)Integrated related to: BAMS Connectivity, BioGRID, BioNumbers, PubMed, Brain Architecture Management System, CellML Model Repository, CHEBI, Comparative Toxicogenomics Database, Coriell Cell Repositories, Drug Related Gene Database, DrugBank, Gene Weaver, Internet Brain Volume Database, Cell Centered Database, Brede Database, ModelDB, NeuronDB, NeuroMorpho.Org, Nuclear Receptor Signaling Atlas , Cell Image Library (CIL), Animal Imaging Database, Olfactory Receptor DataBase, Glomerular Activity Response Archive, CRCNS, OMIM, Rat Genome Database (RGD), Visiome Platform, NIDA Data Share, bioDBcore, Addgene, Antibody Registry, Beta Cell Biology Consortium , FlyBase, SumsDB, SciCrunch Registry, Mouse Genome Informatics Transgenes, NCBI Taxonomy, OpenNeuro, PeptideAtlas, Temporal-Lobe: Hippocampal - Parahippocampal Neuroanatomy of the Rat, NIF Registry Automated Crawl Data, AutDB, Gene Expression Omnibus, Gene Ontology, Avian Brain Circuitry Database, Zebrafish Information Network, GeneDB, WormBase, YPED, used by: NIF Data Federation, listed by: NeuroImaging Tools and Resources Collaboratory (NITRC), Gene Ontology ToolsReferences (2)Last checked downnlx_149407http://neuinfo.org/nif/nifgwt.html?query=nlx_149407, https://neuinfo.org/mynif/search.php?q=*&t=indexable&list=cover&nif=nlx_149407-1
University of Chicago; Illinois; USAResource, degree granting program, training resourcePrivate research university in Chicago, Illinois.private university, chicago, degree programSCR_002832(University of Chicago; Illinois; USA, RRID:SCR_002832)related to: Alzheimers Disease Genetics Consortium, Beta Cell Biology Consortium , Clinical and Translational Science Awards Consortium, uses: Research Accelerator, affiliated with: Marine Biological LaboratoryLast checked upnlx_50001
Hadassah Medical Center; Jerusalem; IsraelResource, hospitalSCR_011261(Hadassah Medical Center; Jerusalem; Israel, RRID:SCR_011261)Hebrew University of Jerusalem; Jerusalem; Israel related to: Beta Cell Biology ConsortiumLast checked upnlx_158442
French National Center for Scientific ResearchResource, institutionA government-funded research organization with the following missions: * To evaluate and carry out all research capable of advancing knowledge and bringing social, cultural, and economic benefits for society. * To contribute to the application and promotion of research results. * To develop scientific information. * To support research training. * To participate in the analysis of the national and international scientific climate and its potential for evolution in order to develop a national policy. As the largest fundamental research organization in Europe, CNRS carried out research in all fields of knowledge, through its seven institutes: * Institute of Biological Sciences (INSB) * Institute of Chemistry (INC) * Institute of Ecology and Environment (INEE) * Institute for Humanities and Social Sciences (INSHS) * Institute for Computer Sciences (INS2I) * Institute for Engineering and Systems Sciences (INSIS) * Institute of Physics (INP) and three national institutes: * National Institute for Mathematical Sciences (INSMI) * National Institute of Nuclear and Particle Physics (IN2P3) * National Institute for Earth Sciences and Astronomy (INSU) CNRS''s annual budget represents a quarter of French public spending on civilian research. This funding comes from various sources: * Government and public funding; * CNRS funds, primarily from industrial and EU research contracts and royalties on patents, licenses, and services provided.SCR_011247(French National Center for Scientific Research, RRID:SCR_011247)French Ministry of Higher Education and Research related to: Genolevures, eTRIKS, IMIDIA, PharmaCog, Beta Cell Biology Consortium, uses: DataCiteLast checked upnlx_98477
Hagedorn Research Institute; Gentofte; DenmarkResource, institutionA diabetes research facility that focuses its research efforts on early applied research. This approach will be based on translational biology-based innovations in five main specialty areas: * Insulin & Incretins * Beta-cell Reconstitution * Stem-cell Therapy * Diabetes Inflammation * diabetes genetics The expanded research focus will aim to identify new biology-based targets for potential drugs to supply Novo Nordisk''s pipeline within the key areas of diabetes pathogenesis, treatment and cure. The discovery primarily takes place through in vitro assays with proteins and peptides. They serve as an early applied research center for Novo Nordisk''s Diabetes Research Unit (DRU) and as a strategic hub for DRU''s early discovery research.SCR_011262(Hagedorn Research Institute; Gentofte; Denmark, RRID:SCR_011262)related to: Beta Cell Biology ConsortiumLast checked downnlx_158447
Max Planck Institute for Heart and Lung Research; Bad Nauheim; GermanyResource, institutionSCR_011374(Max Planck Institute for Heart and Lung Research; Bad Nauheim; Germany, RRID:SCR_011374)Max-Planck-Gesellschaft related to: Beta Cell Biology ConsortiumLast checked upnlx_151480
Seattle Childrens Research Institute; Washington; USAResource, institutionA top five pediatric research center in the nation that brings together the best minds in pediatric research to set new standards of pediatric care and find new cures for childhood diseases. Their goal is that every patient at Seattle Children''s has the opportunity to participate in, or benefit from, their groundbreaking research. The research institute is organized into nine centers, each one specializing in areas like cancer immunotherapy, neuroscience and child health and behavior. The centers are supported by faculty from the Treuman Katz Center for Pediatric Bioethics , the nation''s first pediatric bioethics center.SCR_011520(Seattle Childrens Research Institute; Washington; USA, RRID:SCR_011520)related to: Beta Cell Biology ConsortiumLast checked upnlx_158444
Childrens Hospital of Philadelphia - Research Institute; Pennsylvania; USAResource, institutionSCR_003416(Childrens Hospital of Philadelphia - Research Institute; Pennsylvania; USA, RRID:SCR_003416)related to: Alzheimers Disease Genetics Consortium, Beta Cell Biology ConsortiumLast checked upnlx_151872
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