Searching across hundreds of databases

Our searching services are busy right now. Your search will reload in five seconds.

  • Register
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.


Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

Preparing word cloud



Type in a keyword to search

Filter by last modified time
See new records

Current Facets and Filters

  • Organism:mammal (facet)
  • Keywords : Ascending


Sort alphabetically | Sort by count

Recent searches

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

(last updated: Oct 5, 2019)

Physical Resource or Software Tool Software

53 Results - per page

Resource NameResource TypeDescriptionKeywordsResource IDProper CitationParent OrganizationRelated ConditionFunding AgencyRelationReferenceWebsite StatusAlternate IDsAlternate URLsOld URLs
Mammalian Adult Neurogenesis Gene OntologyResource, database, ontology, data or information resource, controlled vocabularyDatabase of genes concerning adult neurogenesis mapped to cell types and processes that have been curated from the literature. In its present state, the database is restricted to neurogenesis in the neurogenesis, adult, neurogenesis, hippocampus, gene, annotation, cell type, processSCR_006176(Mammalian Adult Neurogenesis Gene Ontology, RRID:SCR_006176)Dresden University of Technology; Saxony; Germany Last checked upnlx_151684
NeuroMabResource, reagent supplier, material resource, antibody supplierA national mouse monoclonal antibody generating resource for biochemical and immunohistochemical applications in mammalian brain. NeuroMabs are generated from mice immunized with synthetic and recombinant immunogens corresponding to components of the neuronal proteome as predicted from genomic and other large-scale cloning efforts. Comprehensive biochemical and immunohistochemical analyses of human, primate and non-primate mammalian brain are incorporated into the initial NeuroMab screening procedure. This yields a subset of mouse mAbs that are optimized for use in brain (i.e. NeuroMabs): for immunocytochemical-based imaging studies of protein localization in adult, developing and pathological brain samples, for biochemical analyses of subunit composition and post-translational modifications of native brain proteins, and for proteomic analyses of native brain protein networks. The NeuroMab facility was initially funded with a five-year U24 cooperative grant from NINDS and NIMH. The initial goal of the facility for this funding period is to generate a library of novel NeuroMabs against neuronal proteins, initially focusing on membrane proteins (receptors/channels/transporters), synaptic proteins, other neuronal signaling molecules, and proteins with established links to disease states. The scope of the facility was expanded with supplements from the NIH Blueprint for Neuroscience Research to include neurodevelopmental targets, the NIH Roadmap for Medical Research to include epigenetics targets, and NIH Office of Rare Diseases Research to include rare disease targets. These NeuroMabs will then be produced on a large scale and made available to the neuroscience research community on an inexpensive basis as tissue culture supernatants or purified immunoglobulin by Antibodies Inc. The UC Davis/NIH NeuroMab Facility makes NeuroMabs available directly to end users and is unable to accommodate sales to distributors for third party distribution. Note, NeuroMab antibodies are now offered through antibodiesinc.antibody, brain, channel, disease-related protein, k channel subunit, mab, mammalian, membrane protein, monoclonal antibody, mouse, neuronal monoclonal antibody, neuronal protein, neuronal signaling molecule, reagent, receptor, research reagent, synaptic protein, transporterSCR_003086(NeuroMab, RRID:SCR_003086)University of California at Davis; California; USA Antibodies Inc., NIH Blueprint for Neuroscience Research, NIH Roadmap for Medical Research, NIMH, NINDS, Office of Rare Diseases Researchused by: NIF Data Federation, listed by: OMICtoolsLast checked upnif-0000-00175, OMICS_01774
FEEDResource, software resource, source code, data or information resource, databaseDatabase of physiologic data and associated metadata related to feeding behavior for a number of mammalian species, including human. The data contain information on muscle activity, bone and muscle strain, jaw and oropharyngeal apparatus motion, and intra-oral pressure and were generated using several techniques (e.g., electromyography, cineradiography, sonomicrometry). The data are searchable and can be downloaded into csv format.appetitive activity, comparative anatomy, feeding behavior, muscle, pharynx, teeth, ontology, evolution, functional morphology, physiology, development, head, behavior, mouth, oralSCR_000637(FEED, RRID:SCR_000637)NESCent - National Evolutionary Synthesis Center NESCent - National Evolutionary Synthesis CenterLast checked upnlx_151995
RESNETResource, data or information resource, databaseDatabases that represent sets of pre-compiled information on biological relationships and associations, interactions and facts which have been extracted from the biomedical literature using Ariadne's MedScan technology. ResNet databases store information harvested from the entire PubMed in a formal structure that allows searching, retrieval and updating by Pathway Studio user. ResNet is seamlessly installed when Pathway Studio is installed. There are several available ResNet databases: *ResNet Mammalian Database includes data for Human, Rat, and Mouse *ResNet Plant Database has data on Arabidopsis, Rice and several other plants. Features of ResNet: *All extracted relations have linked access to the original article or abstract *Synonyms and homologs are included to maintain gene identity and to obviate redundancy in search results *Users can update ResNet as often as required using the MedScan technology built into all Ariadne products *Updates are made available by Ariadne every quarter To purchase Pathway Studio software with ResNet database, for information, or to schedule a web demonstration, call our sales department at (240) 453-6272, or (866) 340-5040 (toll free).biological relationship, biomedical, literature, interactionSCR_002121(RESNET, RRID:SCR_002121)Indiana University School of Medicine; Indiana; USA listed by: BiositemapsLast checked downnif-0000-20909
Human Brain Project EUResource, organization portal, portal, funding resource, data or information resourceA global, collaborative effort for neuroscience, medicine and computing to understand the brain, its diseases and its computational capabilities. They aim to build a completely new information computing technology infrastructure for neuroscience and for brain-related research in medicine and computing, catalyzing a global collaborative effort to understand the human brain and its diseases and ultimately to emulate its computational capabilities. This ten-year, large-scale European research initiative whose goal is to understand the human brain and its diseases and ultimately to emulate its computational capabilities has reserved a portion of its ramp-up phase funding for specific tasks to be carried out by new beneficiaries who will join the consortium in 2014. These new beneficiaries will be selected from proposals submitted in response to this Competitive Call. The proposals should encompass research activities exclusively. One of the HBP's strategic goals is to prepare a large-scale program of research on the themes of the Flagship, allowing the HBP to obtain the best possible access to research, data sources, platforms and infrastructures offered by other organisations, and enabling organizations outside the HBP to use the HBP platforms to pursue their own research. Coordinating these activities is the responsibility of the European Research Programme (ERP).brain, ethics, neuroscience, medicine, computing, treatment, brain disease, neuroinformatics, software development, computational modeling, software, connectomicsSCR_002241(Human Brain Project EU, RRID:SCR_002241)related to: BigBrainLast checked upnlx_155553
Blue Brain ProjectResource, topical portal, portal, data or information resourceA Swiss-led project with the aim of reverse engineering the mammalian brain and achieving a complete virtual human brain. The researchers have demonstrated the validity of their method by developing a realistic model of a rat cortical column, consisting of about 10,000 neurons. The eventual goal is to simulate systems of millions and hundreds of millions of neurons. The virtual brain will be an exceptional tool giving neuroscientists a new understanding of the brain and a better understanding of neurological diseases. In five years of work, Henry Markram's team has perfected a facility that can create realistic models of one of the brain's essential building blocks. This process is entirely data driven and essentially automatically executed on the supercomputer. Meanwhile the generated models show a behavior already observed in years of neuroscientific experiments. These models will be basic building blocks for larger scale models leading towards a complete virtual brain.brain, neuron, microcircuit, simulation, cortex, cortical column, modelSCR_002994(Blue Brain Project, RRID:SCR_002994)Ecole Polytechnique Federale de Lausanne; Lausanne; Switzerland Neurological diseaserelated to: NeuroCuratorLast checked upnif-0000-30208
Cell Type OntologyResource, ontology, data or information resource, controlled vocabularyOntology designed as a structured controlled vocabulary for cell types. It was constructed for use by the model organism and other bioinformatics databases. It includes cell types from prokaryotes, mammals, and fungi. The ontology is available in the formats adopted by the Open Biological Ontologies umbrella and is designed to be used in the context of model organism genome and other biological databases.cell ontology, ontology repositorySCR_004251(Cell Type Ontology, RRID:SCR_004251)BBSRC, MRC, NIH, NSFrelated to: CELDA Ontology, OBO, Cell Line Knowledge Base, listed by: BioPortalPMID:15693950Last checked upnlx_26501
ARACNEResource, software resource, software applicationAn algorithm, using microarray expression profiles, to scale up to the complexity of regulatory networks in mammalian cells, yet general enough to address a wider range of network deconvolution problems. This method uses an information theoretic approach to eliminate the vast majority of indirect interactions typically inferred by pairwise analysis.cellular network, cellular, network, microarray, expression profile, deconvolution, regulatory networkSCR_002180(ARACNE, RRID:SCR_002180)Columbia University; New York; USA related to: B Cell Interactome, listed by: OMICtoolsPMID:16723010Last checked upOMICS_01851
ChEAResource, data analysis service, database, analysis service resource, software application, production service resource, service resource, software resource, data or information resourceData analysis service for gene-list enrichment analysis against a manual database. It allows users to input lists of mammalian gene symbols for which the program computes over-representation of transcription factor targets from the ChIP-X database. The database integrates interaction data from ChIP-chip, ChIP-seq, ChIP-PET and DamID studies and contains 189,933 interactions, manually extracted from 87 publications, describing the binding of 92 transcription factors to 31,932 target genes.chip, transcription factor, interaction, mrna expression, gene, target gene, command-line, chip-chip, chip-seqSCR_005403(ChEA, RRID:SCR_005403)Icahn School of Medicine at Mount Sinai; New York; USA listed by: OMICtoolsPMID:20709693Last checked upOMICS_00526
HaploRegResource, data or information resource, databaseHaploReg is a tool for exploring annotations of the noncoding genome at variants on haplotype blocks, such as candidate regulatory SNPs at disease-associated loci. Using linkage disequilibrium (LD) information from the 1000 Genomes Project, linked SNPs and small indels can be visualized along with their predicted chromatin state in nine cell types, conservation across mammals, and their effect on regulatory motifs. HaploReg is designed for researchers developing mechanistic hypotheses of the impact of non-coding variants on clinical phenotypes and normal variation.chromatin state, conservation, regulatory motif, alteration, variant, chromatin, motif, annotation, genome, variation, genome-wide association study, refsnp, refseq gene, snpSCR_006796(HaploReg, RRID:SCR_006796)Broad Institute NHGRI, NSFPMID:22064851Last checked upnlx_151407
BioRepResource, material analysis service, analysis service resource, biomaterial supply resource, biospecimen repository, production service resource, tissue bank, material service resource, service resource, storage service resource, cell repository, biomaterial analysis service, material resource, biomaterial manufacture, material storage repositoryOffer biorepository services to public and private research institutes, to the highest standards of quality and safety with the aim of contributing to the advancement of medical research and scientific discovery. The BioRep Cell Repository establishes, maintains and distributes cell line cultures as well as DNA derived from these cultures. The scientific and business affiliation between BioRep and Coriell allows access to more than a million types of cell vials, stored in liquid nitrogen. Cells that have been stored for nearly 50 years, are still viable and available for research purposes today. Thanks to an exclusive agreement with the Coriell Institute for Medical Research, the oldest and largest biorepository of the world, BioRep is specialized in cell lines preparation, in nucleic acid extraction and long term storage in liquid nitrose (-196 degrees C) and in refrigerators (-80 degrees C) of any kind of biosamples, using procedures and standards developed by the Coriell in over 50 years of activity. BioRep and Coriell together constitute one of the few Global Biorepository able to serve the pharmaceutical industries for world wide clinical trials. BioRep facility is specifically designed to give the utmost efficiency and security by implementing Coriell procedures and standards. The BioRep Tissue Repository provides safe and secure storage of tissue specimens as required for medical research and scientific investigation. All tissues are preserved with the most current preservation techniques and processes. In addition to the storage service, BioRep provides Cell Biology, Molecular Biology, Microbiology services developed in ISO 9001:2008 certified laboratories.chromosome analysis, dhplc analysis, methylation, genotyping, gender analysis, sequencing service, nucleic acid isolation, catalog, cell line, dna, cell, tissue, frozen, liquid nitrogen, vapor nitrogen, refrigerator, fixed, paraffin embedded, slide, cryogenic, paraffin block, cryopreserved, molecular biology, microbiology, cytogenetics, media preparation, tissue microarray, cell array, frozen array, cell biology, research, transplantation, custom, blood, tissue, ebv transformed lymphoblast culture, fibroblast cell culture, nucleic acid, sequence, mycoplasma, karyotypeSCR_004907(BioRep, RRID:SCR_004907)related to: Coriell Institute for Medical Research, listed by: One Mind Biospecimen Bank ListingLast checked upnlx_87504
BioCycResource, data analysis service, data access protocol, production service resource, analysis service resource, database, web service, service resource, software resource, data or information resourceA collection of Pathway/Genome Databases which describes the genome and metabolic pathways of a single organism. The BioCyc collection of Pathway/Genome Databases (PGDBs) provides an electronic reference source on the genomes and metabolic pathways of sequenced organisms. BioCyc PGDBs are generated by software that predicts the metabolic pathway complements of completely sequenced organisms from their genome sequences. They also include the results of a number of other computational inference procedures applied to these genomes, including predictions of which genes code for missing enzymes in metabolic pathways, and predicted operons. The BioCyc Web site provides a suite of software tools for database searching and visualization, for omics data analysis, and for comparative genomics and comparative pathway questions. The databases within the BioCyc collection are organized into tiers according to the amount of manual review and updating they have received. Tier 1 PGDBs have been created through intensive manual efforts, and receive continuous updating. Tier 2 PGDBs were computationally generated by the PathoLogic program, and have undergone moderate amounts of review and updating. Tier 3 PGDBs were computationally generated by the PathoLogic program, and have undergone no review and updating. There are 967 DBs in Tier 3. The downloadable version of BioCyc that includes the Pathway Tools software provides more speed and power than the BioCyc Web site.database, pathway/genome databases, PGDB, genome, metabolic pathway, microbiomeSCR_002298(BioCyc, RRID:SCR_002298)Stanford Research Institute International NIGMSrelated to: Pathway Tools, PathCase Pathways Database System, EcoCyc, MetaCyc, HumanCyc: Encyclopedia of Homo sapiens Genes and Metabolism, EcoCyc, Gramene, NCBI BioSystems Database, KOBAS, Tuberculosis Database, Pathway Tools, used by: PathCase Pathways Database System, uses: Pathway Tools, listed by: LabWorm, Human Microbiome Project, lists: Pathway Tools, EcoCyc, MetaCyc, HumanCyc: Encyclopedia of Homo sapiens Genes and MetabolismPMID:16246909Last checked upnif-0000-00369
Atlas of Living AustraliaResource, database, service resource, storage service resource, software resource, image repository, data repository, data or information resourceRepository of scientifically collected data on all the known species in Australia aggregated from a wide range of data providers: museums, herbaria, community groups, government departments, individuals and universities. Data records consist of images, literature, molecular DNA data, identification keys, species interaction data, species profile data, nomenclature, source data, conservation indicators, and spatial data. Several standards are preferred for data provided to the Atlas. Use this site to: * access information pages for each species containing photos, descriptions, maps and observations * access scientific and common names * explore the flora and fauna reported around your neighborhood * learn about Australia's biodiversity collections at museums, herbaria and other institutions * learn about citizen science projects * map, analyze and visualize biodiversity and environmental data and trends * access tools to help track changes in biodiversity and the environment * download and use open source tools * download biodiversity data * access images, literature and genetic information through Australian nodes of international data repositories * volunteer for digitization projects. The Atlas of Living Australia (Atlas) and its associated information systems provides web services for accessing information over the sharing, biodiversity, image, photograph, dna, conservation, natural resource, literature, nomenclature, australia, morphology, life stage, stage, behavior, reproduction, habitat, genetic, region, species, portal, data set, data analysis service, metadata standard, web service, image collectionSCR_006467(Atlas of Living Australia, RRID:SCR_006467) GBIF - Global Biodiversity Information Facility , CSIRO listed by:, DataCiteLast checked upnlx_152016
Globin Gene Server Resource, source code, data analysis service, resource, database, analysis service resource, production service resource, narrative resource, service resource, training material, software resource, data or information resourceData and tools for studying the function of DNA sequences, with an emphasis on those involved in the production of hemoglobin. It includes information about naturally-occurring human hemoglobin mutations and their effects, experimental data related to the regulation of the beta-like globin gene cluster, and software tools for comparing sequences with one another to discover regions that are likely to play significant roles.dna sequence, hemoglobin, mutation, globin gene cluster, sequence comparison, functional genomics, gene, alignment, genetic analysis, variant, gene expression, protein, thalassemia, globin gene, genome, pairwise alignment, multiple alignment, annotation, sequence analysis, dnaSCR_001480( Globin Gene Server , RRID:SCR_001480)Pennsylvania State University NIDDK, NLMlisted by: NIDDK Information Network, submitted by: NIDDK Information NetworkReferences (5)Last checked upnlx_152723
Brad Smith Magnetic Resonance Imaging of EmbryosResource, data set, video resource, image collection, data or information resourceData set of image collections and movies including Magnetic Resonance Imaging of Embryos, Human Embryo Imaging, MRI of Cardiovascular Development, and Live Embryo Imaging. Individual MRI slice images, three-dimensional images, animations, stereo-pair animations, animations of organ systems, and photo-micrographs are included.embryo, magnetic resonance imaging, embryonic development, magnetic resonance microscopy, cardiovascular development, cardiovascular, development, heart, blood vessel, in-utero, in-vitro, embryonic mouse, newborn mouse, embryonic humanSCR_006300(Brad Smith Magnetic Resonance Imaging of Embryos, RRID:SCR_006300)University of Michigan; Michigan; USA Normal, Mutant, Gentically-manipulatedrelated to: Magnetic Resonance Microscopy of Mouse Embryo Specimens, Multi-Dimensional Human EmbryoLast checked upnlx_151971
MouseCycResource, data analysis service, production service resource, analysis service resource, database, service resource, data or information resourceA manually curated database of both known and predicted metabolic pathways for the laboratory mouse. It has been integrated with genetic and genomic data for the laboratory mouse available from the Mouse Genome Informatics database and with pathway data from other organisms, including human. The database records for 1,060 genes in Mouse Genome Informatics (MGI) are linked directly to 294 pathways with 1,790 compounds and 1,122 enzymatic reactions in MouseCyc. (Aug. 2013) BLAST and other tools are available. The initial focus for the development of MouseCyc is on metabolism and includes such cell level processes as biosynthesis, degradation, energy production, and detoxification. MouseCyc differs from existing pathway databases and software tools because of the extent to which the pathway information in MouseCyc is integrated with the wealth of biological knowledge for the laboratory mouse that is available from the Mouse Genome Informatics (MGI) production, biosynthesis, cell, cellular, degradation, detoxification, metabolism, mouse, physiological, enzymatic reaction, gene, disease, genome, metabolic pathway, pathway, compound, enzymatic reaction, protein, rna, reaction, blast, human, mammal, genetic, genomicSCR_001791(MouseCyc, RRID:SCR_001791)Jackson Laboratory NHGRIrelated to: Mouse Genome Informatics (MGI), Gene Ontology, Monarch InitiativePMID:19682380Last checked upnif-0000-10303
MatrixDBResource, service resource, data or information resource, production service resource, databaseFreely available database focused on interactions established by extracellular proteins and polysaccharides, taking into account the multimeric nature of the extracellular proteins (e.g. collagens, laminins and thrombospondins are multimers). MatrixDB is an active member of the International Molecular Exchange (IMEx) consortium and has adopted the PSI-MI standards for annotating and exchanging interaction data. It includes interaction data extracted from the literature by manual curation, and offers access to relevant data involving extracellular proteins provided by the IMEx partner databases through the PSICQUIC webservice, as well as data from the Human Protein Reference Database. The database reports mammalian protein-protein and protein-carbohydrate interactions involving extracellular molecules. Interactions with lipids and cations are also reported. MatrixDB is focused on mammalian interactions, but aims to integrate interaction datasets of model organisms when available. MatrixDB provides direct links to databases recapitulating mutations in genes encoding extracellular proteins, to UniGene and to the Human Protein Atlas that shows expression and localization of proteins in a large variety of normal human tissues and cells. MatrixDB allows researchers to perform customized queries and to build tissue- and disease-specific interaction networks that can be visualized and analyzed with Cytoscape or Medusa. Statistics (2013): 2283 extracellular matrix interactions including 2095 protein-protein and 169 protein-glycosaminoglycan interactions.extracellular, protein fragment, biomolecule, cation, cleavage, collagen, glycosaminoglycan, human, interaction, laminin, lipid, mammalian, matricryptin, matrikin, matrix, molecule, monomer, mulimerization, multimer, polysaccharide, protein, protein-carbohydrate interaction, protein-protein interaction, recognition, thrombospondin, interactome, extracellular protein, protein-polysaccharide interaction, extracellular interaction, molecular interaction, model organism, inorganic, small molecule-protein, small molecule, extracellular matrix protein, protein-glycosaminoglycan interactionSCR_001727(MatrixDB, RRID:SCR_001727)Claude Bernard University Lyon 1; Lyon; France European Unionrelated to: IMEx - The International Molecular Exchange Consortium, Gene Ontology, PSI-MI, HPRD - Human Protein Reference Database, Interaction Reference Index, ConsensusPathDB, IMEx - The International Molecular Exchange Consortium, PSICQUIC Registry, IntAct, listed by: re3data.orgReferences (2)Last checked upnif-0000-10226
BraInSitu: A homepage for molecular neuroanatomyResource, database, image, expression atlas, narrative resource, experimental protocol, atlas, data or information resourceDatabase of detailed protocols for single and double in situ hybridization (ISH) method, probes used by Yamamori lab and others useful for studies of brain, and many photos of mammalian (mostly mouse and monkey) brains stained with various gene probes. Also includes a brain atlas of gene expression. Currently, the atlas comprises a series of un-annotated images showing the localization of a particular probe or molecule, e.g., AChE.function, gene expression, gene, anatomical structure, brain, central nervous system, cerebral cortex, in situ hybridization, mammalian, neocortex, pcr cloning, probe, molecular neuroanatomy resource, neuroanatomy, in situ hybridization protocolSCR_008081(BraInSitu: A homepage for molecular neuroanatomy, RRID:SCR_008081)National Institute for Basic Biology; Okazaki; Japan Last checked upnif-0000-11633
Protein LoungeResource, data analysis service, database, analysis service resource, production service resource, narrative resource, service resource, training material, data or information resourceComplete siRNA target database, complete Peptide-Antigen target database and a Kinase-Phosphatase database. They have also developed the largest database of illustrated signal transduction pathways, which are interconnected to their extensive protein database and online gene / protein analysis tools. The interactive web-based databases and software help life-scientists understand the complexity of systems biology. Systems biology efforts focus on understanding cellular networks, protein interactions involved in cell signaling, mechanisms of cell survival and apoptosis leading to development or identification of drug candidates against a variety of diseases. In the post-genomic era, one of the major concerns for life-science researchers is the organization of gene / protein data. Protein Lounge has met this concern by organizing all necessary data about genes / proteins into one portal.gene, antigen, bioinformatics, kinase, life science, peptide, phosphatase, signal transduction pathway, sirna, systems biology, protein, biology, cellular network, protein interaction, cell signaling, cell survival, apoptosis, peptide-antigen, kinase-phosphatase, image, pathwaySCR_002117(Protein Lounge, RRID:SCR_002117)Last checked upnif-0000-20903
UD Chick EST ProjectResource, biomaterial supply resource, data or information resource, cell repository, material resource, databaseA chicken EST Web site has been created to provide access to the data, and a set of unique sequences has been deposited with GenBank. This site contains over 40,000 EST sequences from the chicken cDNA libraries in the University of Delaware collection. Users can perform keyword searches, BLAST nucleotide sequences against our database, view clusters of similar or overlapping clones, and order clones. The cDNA and gene sequences of many mammalian cytokines and their receptors are known. However, corresponding information on avian cytokines is limited due to the lack of cross-species activity at the functional level or strong homology at the molecular level. To improve the efficiency of identifying cytokines and novel chicken genes, a directionally cloned cDNA library from T-cell-enriched activated chicken splenocytes was constructed, and the partial sequence of 5251 clones was obtained. Sequence clustering indicates that 2357 (42%) of the clones are present as a single copy, and 2961 are distinct clones, demonstrating the high level of complexity of this library. Comparisons of the sequence data with known DNA sequences in GenBank indicate that approximately 25% of the clones match known chicken genes, 39% have similarity to known genes in other species, and 11% had no match to any sequence in the database. Several previously uncharacterized chicken cytokines and their receptors were present in our library. This collection provides a useful database for cataloging genes expressed in T cells and a valuable resource for future investigations of gene expression in avian immunology. Therefore, the Chick EST database was created.gene, avian, cdna, chicken, clone, cytokine, dna, homology, immunology, mammalian, molecular, nucleotide, poultry, receptor, sequence, splenocyte, t cellSCR_002236(UD Chick EST Project, RRID:SCR_002236)University of Delaware; Delaware; USA listed by: One Mind Biospecimen Bank ListingLast checked downnif-0000-20971
  1. RRID Portal Resources

    Welcome to the RRID Resources search. From here you can search through a compilation of resources used by RRID and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that RRID has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on RRID then you can log in from here to get additional features in RRID such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into RRID you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.