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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

(last updated: Oct 12, 2019)

Physical Resource or Software Tool Software

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Resource NameResource TypeDescriptionKeywordsResource IDProper CitationParent OrganizationRelated ConditionFunding AgencyRelationReferenceWebsite StatusAlternate IDsAlternate URLsOld URLs
Influenza Research Database (IRD)Resource, data analysis service, database, analysis service resource, production service resource, service resource, storage service resource, data repository, data or information resourceThe Influenza Research Database (IRD) serves as a public repository and analysis platform for flu sequence, experiment, surveillance and related data.avian, clinical, genomic, host, influenza, isolate, mammalian, nonhuman, phenotypic, preventive, proteomic, repository, strain, epitope, surveillance, treatment, virus, protein sequence, immune, 3d protein structure, align, blast, short peptide, flu protein, sequence variation, snp, phylogenetic tree, human, 3d spacial image, image, clinical data, clinical, genomic, proteomic, phenotypeSCR_006641(Influenza Research Database (IRD), RRID:SCR_006641) Los Alamos National Laboratory , University of Texas Southwestern Medical Center; Texas; USA , Sage Analytica Influenza virus, InfluenzaNIAIDrelated to: Los Alamos National Laboratory, University of California at Davis, California, USA, Sage Analytica, J. Craig Venter InstitutePMID:17965094Last checked downnif-0000-21222
CAMRDResource, service resource, access service resourceResearch facility of the Department of Radiology at the Duke University Medical Center (DUMC) providing access to a whole-body, commercially manufactured 3 Tesla (Trio, Siemens Medical Systems) MR Imaging and Spectroscopy System with full research capability. The Center is fully equipped to perform clinical and research MR imaging or spectroscopy studies on humans or large animals. A full range of monitoring, anesthesia, RF coil development, computer and instrumental control facilities as well as MR research technologists and physics/chemistry consultation are available to Department of Radiology researchers and their collaborators.anesthesia, animal, chemistry, human, imaging, magnetic resonance, monitoring, mri, physics, radiology, research, rf coil, spectroscopy, technology, tesla, mr spectroscopy, clinical, researchSCR_001713(CAMRD, RRID:SCR_001713)Duke University; North Carolina; USA related to: Beta Cell Biology ConsortiumLast checked upnif-0000-10211
Center for Magnetic Resonance ResearchResource, biomedical technology research center, service resource, access service resource, training resourceBiomedical technology research center that focuses on development of unique magnetic resonance (MR) imaging and spectroscopy methodologies and instrumentation for the acquisition of structural, functional, and biochemical information non-invasively in humans, and utilizing this capability to investigate organ function in health and disease. The distinctive feature of this resource is the emphasis on ultrahigh magnetic fields (7 Tesla and above), which was pioneered by this BTRC. This emphasis is based on the premise that there exists significant advantages to extracting biomedical information using ultrahigh magnetic fields, provided difficulties encountered by working at high frequencies corresponding to such high field strengths can be overcome by methodological and engineering solutions. This BTRC is home to some of the most advanced MR instrumentation in the world, complemented by human resources that provide unique expertise in imaging physics, engineering, and signal processing. No single group of scientists can successfully carry out all aspects of this type of interdisciplinary biomedical research; by bringing together these multi-disciplinary capabilities in a synergistic fashion, facilitating these interdisciplinary interactions, and providing adequate and centralized support for them under a central umbrella, this BTRC amplifies the contributions of each of these groups of scientists to basic and clinical biomedical research. Collectively, the approaches and instrumentation developed in this BTRC constitute some of the most important tools used today to study system level organ function and physiology in humans for basic and translational research, and are increasingly applied world-wide. CMRR Faculty conducts research in a variety of areas including: * High field functional brain mapping in humans; methodological developments, mechanistic studies, and neuroscience applications * Metabolism, bioenergetics, and perfusion studies of human pathological states (tumors, obesity, diabetes, hepatic encephalopathy, cystic fibrosis, and psychiatric disorders) * Cardiac bioenergetics under normal and pathological conditions * Automated magnetic field shimming methods that are critical for spectroscopy and ultrafast imaging at high magnetic fields * Development of high field magnetic resonance imaging and spectroscopy techniques for anatomic, physiologic, metabolic, and functional studies in humans and animal models * Radiofrequency (RF) pulse design based on adiabatic principles * Development of magnetic resonance hardware for high fields (e.g. RF coils, pre-amplifiers, digital receivers, phased arrays, etc.) * Development of software for data analysis and display for functional brain mapping.mri, imaging, magnetic resonance spectroscopy, clinical, core facility, in vivo, brain mappingSCR_003148(Center for Magnetic Resonance Research, RRID:SCR_003148)University of Minnesota Twin Cities; Minnesota; USA NCRR, NIBIB, NIH Blueprint for Neuroscience Research, W. M. Keck FoundationLast checked upnif-0000-00563
TalkBankResource, narrative resource, data or information resource, training material, databaseDatabases of transcript and media data collected from conversations with adults and older children to foster fundamental research in the study of human and animal communication. Conversations with children are available from CHILDES. All of the data is transcribed in CHAT and CA/CHAT formats. Databases of the following types are included in the collection: Aphasia patient speech, Child speech, Study of Phonological Development, Conversation Analysis, and Bilingualism and Second Language Acquisition. TalkBank will use these databases to advance the development of standards and tools for creating, sharing, searching, and commenting upon primary materials via networked computers.aphasia, aphasiabank, bilingbank, cabank, phonbank, psychology, speech, communication, clinical, transcript, audio track, video, talk, voice, language, conversation, discourse, adult human, child, second language, audiology, media, animal communication, conversation analysis, discourse analysis, gesture, code switching, bilingualism, linguistic, phonological development, danishSCR_003242(TalkBank, RRID:SCR_003242) University of Pennsylvania; Philadelphia; Pennsylvania , Carnegie Mellon University; Pennsylvania; USA Aphasia, Dementia, BilingualismNICHD, NIDCDrelated to: PhonBank, listed by: re3data.org, works_with: Child Language Data Exchange System (CHILDES)Last checked upnif-0000-00626
EpiTargetResource, portal, data or information resourceA multidisciplinary project focused on the process leading to epilepsy, epileptogenesis, in adults. Their main hypothesis is that there are combinations of various causes, acting in parallel and/or in succession, that lead to epileptogenesis and development of seizures. Their central premise and vision is that a combinatorial approach is necessary to identify appropriate biomarkers and develop effective antiepileptogenic therapeutics. The project will focus on: * identifying novel biomarkers and their combinations for epileptogenesis after potentially epileptogenic brain insults in clinically relevant animal models, such as traumatic brain injury (TBI) and status epilepticus (SE); * exploring multiple basic mechanisms of epileptogenesis and their mutual interactions; * and translating these findings towards the clinic by validating biomarkers in human samples accessible to the consortium.common data element, preclinical, target, biomarker, antiepileptogenesis, adult human, animal model, clinicalSCR_003771(EpiTarget, RRID:SCR_003771)Lund University; Lund; Sweden EpilepsyEuropean Union FP7Last checked upnlx_158041
OrionResource, portal, organization portal, commercial organization, data or information resourceA globally operating Finnish developer, manufacturer and marketer of human and veterinary pharmaceuticals, active pharmaceutical ingredients and diagnostic tests. They are continuously developing new drugs and treatment methods. Pharmaceutical RD focuses on central nervous system drugs, oncology and critical care drugs, and Easyhaler pulmonary drugs.pharmaceutical, drug, diagnostic test, diagnostic, central nervous system, drug, oncology, critical care, pulmonary, central nervous system drug, pulmonary drug, cancer, veterinary drug, medicine, clinical, hygiene monitoringSCR_003911(Orion, RRID:SCR_003911)Cancer, Asthma, Alzheimer's disease, Parkinson's disease, Breast cancer, Prostate cancerrelated to: MIP-DILI, NEWMEDS, ORBITO, PREDECTLast checked upnlx_158257
BioreclamationResource, biomaterial supply resource, material resource, commercial organizationA worldwide provider of biological and in vitro products specializing in control and disease state matrices manufactured from human and animal whole blood, plasma, serum, tissues and other fluids which are used in drug discovery, compound development, clinical and research diagnostics. They can immediately add value to drug discovery and preclinical development programs by providing large lots of hepatocytes, other cell types, and subcellular fractions along with associated media. The products enable scientists and biomedical researchers to better understand the pharmacokinetics and drug metabolism of newly discovered compounds and the effects on disease processes.immunology, biological, clinical, matrix, disease state matrix, control matrix, hepatocyte, cell, subcellular fraction, cell culture, blood, fluid, tissue, renal cell, media, renal proximal tubule cell, in vitro cyp microsomeSCR_004728(Bioreclamation, RRID:SCR_004728)Normal, Diseasedrelated to: Sera Laboratories International, listed by: One Mind Biospecimen Bank ListingLast checked upnlx_72707http://www.bioreclamation.com/
Cooperative Study Group for Autoimmune Disease Prevention Resource, knowledge environment, resourceCollaborative network of investigators with a focus on prevention of autoimmune disease, defined as halting the development of autoimmune disease prior to clinical onset by means other than global immunosuppression, and an emphasis on Type 1 diabetes. Its mission is to engage in scientific discovery that significantly advances knowledge for the prevention and regulation of autoimmune disease. The specific goals enunciated in pursuit of this mission are: * To create improved models of disease pathogenesis and therapy to better understand immune mechanisms that will provide opportunities for prevention strategies * To use these models as validation platforms with which to test new tools applicable to human studies * To encourage core expertise and collaborative projects designed for rapid translation from animal to human studies, emphasizing the development of surrogate markers for disease progression and/or regulation which can be utilized in the context of clinical trialsprevention, clinical, immune, model, disease pathogenesis, therapySCR_006803( Cooperative Study Group for Autoimmune Disease Prevention , RRID:SCR_006803)Autoimmune disease, Type 1 diabetesJuvenile Diabetes Research Foundation International, NIAID, NICHD, NIDDK, NIH Office of Research on Womens Healthlisted by: NIDDK Information Network, NIDDK Research Resources, submitted by: NIDDK Information NetworkLast checked upnlx_152797
SIU Center for Alzheimer's Disease and Related DisordersResource, disease-related portal, topical portal, patient-support portal, service resource, portal, training service resource, data or information resourceResource center that provides assistance for patients and families affected by Alzheimer's disease and related conditions. The Center provides patient care through the Memory and Aging Clinic as well as through research, education and service to the community. Additionally the Center provides training in dementia care, maintains centralized data collection, and sponsors programs of research that qualify for federal financial participation.alzheimer's disease, dementia, clinical trial, clinical, late adult human, research, patient care, education, training serviceSCR_013199(SIU Center for Alzheimer's Disease and Related Disorders, RRID:SCR_013199)Southern Illinois University School of Medicine; Illinois; USA Alzheimer's disease, Dementia, AgingLast checked upnlx_144045
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