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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

(last updated: Oct 12, 2019)

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Resource NameResource TypeDescriptionKeywordsResource IDProper CitationParent OrganizationRelated ConditionFunding AgencyRelationReferenceWebsite StatusAlternate IDsAlternate URLsOld URLs
Automated Microarray PipelineResource, analysis service resource, data analysis service, service resource, production service resourceTHIS RESOURCE IS NO LONGER IN SERVICE, documented November 4, 2015. Web application based on the TM4 Microarray Software Suite to provide a means of normalization and analysis of microarray data. Users can upload data in the form of Affymetrix CEL files, and define an analysis pipeline by selecting several intuitive options. It performs data normalization (eg RMA), basic statistical analysis (eg t-test, ANOVA), and analysis of annotation using gene classification (eg Gene Ontology term assignment). The analysis are performed without user intervention and the results are presented in a web-based summary that allows data to be downloaded in a variety of formats compatible with further directed analysis.microarray, normalizationSCR_001219(Automated Microarray Pipeline, RRID:SCR_001219)TM4 NLMrelated to: Gene Ontology, listed by: OMICtoolsLast checked upOMICS_02125http://www.tm4.org/amp.html
ComiRResource, analysis service resource, data analysis service, service resource, production service resourceData analysis service that predicts whether a given mRNA is targeted by a set of miRNAs. ComiR uses miRNA expression to improve and combine multiple miRNA targets for each of the four prediction algorithms: miRanda, PITA, TargetScan and mirSVR. The composite scores of the four algorithms are then combined using a support vector machine trained on Drosophila Ago1 IP data.mirnaSCR_013023(ComiR, RRID:SCR_013023)University of Pittsburgh; Pennsylvania; USA Fondazione RiMED, NLMlisted by: OMICtoolsReferences (2)Last checked upOMICS_00395
DP-Bind: a web server for sequence-based prediction of DNA-binding residues in DNA-binding proteinsResource, analysis service resource, data analysis service, service resource, production service resourceThis web-server takes a user-supplied sequence of a DNA-binding protein and predicts residue positions involved in interactions with DNA. Prediction can be performed using a profile of evolutionary conservation of the input sequence automatically generated by the web-server or the input sequence alone. Three prediction methods are run for each input sequence and consensus prediction is generated.dna bindingSCR_003039(DP-Bind: a web server for sequence-based prediction of DNA-binding residues in DNA-binding proteins, RRID:SCR_003039)University at Albany; New York; USA NLMReferences (2)Last checked downnif-0000-30426
Distant Regulatory ElementsResource, analysis service resource, data analysis service, service resource, production service resourceWeb server based on the Enhancer Identification (EI) method, to determine the chromosomal location and functional characteristics of distant regulatory elements (REs) in higher eukaryotic genomes. The server uses gene co-expression data, comparative genomics, and combinatorics of transcription factor binding sites (TFBSs) to find TFBS-association signatures that can be used for discriminating specific regulatory functions. DiRE's unique feature is the detection of REs outside of proximal promoter regions, as it takes advantage of the full gene locus to conduct the search. DiRE can predict common REs for any set of input genes for which the user has prior knowledge of co-expression, co-function, or other biologically meaningful grouping. The server predicts function-specific REs consisting of clusters of specifically-associated TFBSs, and it also scores the association of individual TFs with the biological function shared by the group of input genes. Its integration with the Array2BIO server allows users to start their analysis with raw microarray expression data.regulatory element, enhancer identification, genome, prediction, transcription factor binding site, gene, co-expression, co-function, function, transcription factor, comparative genomics, regulatory function, gene locus, chromosomeSCR_003058(Distant Regulatory Elements, RRID:SCR_003058)NCBI Intramural Research Program, NLMPMID:18487623Last checked upnif-0000-30448
GO-ModuleResource, analysis service resource, data analysis service, service resource, production service resourceGO-Module provides an interface to reduce the dimensionality of GO enrichment results and produce interpretable biomodules of significant GO terms organized by hierarchical knowledge that contain only true positive results. Users can download a text file of GO terms annotated with their significance and identified biomodules, a network visualization of resultant GO IDs or terms in PDF format, and view results in an online table. Platform: Online toolfunctional similarity, visualization, other analysis, reduce the dimensionality of go enrichment results, produce interpretable biomodules of significant go terms, gene ontology, ontology or annotation visualization, annotationSCR_005813(GO-Module, RRID:SCR_005813)University of Illinois at Chicago; Illinois; USA Cancer Research Foundation, NCI, NCRR, NIH, NLMrelated to: Gene Ontology, AmiGO, listed by: Gene Ontology ToolsPMID:21421553Last checked upnlx_149322
Gene AtlasResource, atlas, data or information resource, databaseThis website allows visitors to search for genes of interest based on their spatial expression patterns in the Postnatal Day 7 mouse brain. Geneatlas provides two searching tools: A graphical interface for customized spatial queries; A textual interface for querying annotated structures. Geneatlas is the product of a collaboration between researchers at Baylor College of Medicine, Rice University, and University of Houston.gene, brain, mouse, protein, spatial expression, molecular neuroanatomy resourceSCR_008089(Gene Atlas, RRID:SCR_008089) Baylor University; Texas; USA , University of Houston; Texas; USA Burroughs Wellcome Fund, NCRR, NLMLast checked downnif-0000-10987
Unified Medical Language SystemResource, data access protocol, database, international standard specification, standard specification, narrative resource, web service, software resource, data or information resourceDatabase of key terminology, classification and coding standards, and associated resources to promote creation of more effective and interoperable biomedical information systems and services, including electronic health records. This set of files and software brings together many health and biomedical vocabularies and standards to enable interoperability between computer systems. Users can use the UMLS to enhance or develop applications, such as electronic health records, classification tools, dictionaries and language translators. The UMLS has three tools, which we call the Knowledge Sources: * Metathesaurus: Terms and codes from many vocabularies, including CPT, ICD-10-CM, LOINC, MeSH, RxNorm, and SNOMED CT * Semantic Network: Broad categories (semantic types) and their relationships (semantic relations) * SPECIALIST Lexicon and Lexical Tools: Natural language processing tools We use the Semantic Network and Lexical Tools to produce the Metathesaurus. Metathesaurus production involves: * Processing the terms and codes using the Lexical Tools * Grouping synonymous terms into concepts * Categorizing concepts by semantic types from the Semantic Network * Incorporating relationships and attributes provided by vocabularies * Releasing the data in a common format Although we integrate these tools for Metathesaurus production, you can access them separately or in any combination according to your needs. The UMLS Terminology Services (UTS) provides three ways to access the UMLS: Web Browsers, Local Installation, and Web Services APIs.interoperability, electronic health record, classification tool, dictionary, language translator, classification, terminology, semantic, metathesaurus, vocabulary, thesaurus, natural language processingSCR_006363(Unified Medical Language System, RRID:SCR_006363)National Library of Medicine NLMrelated to: MeSH, ConceptWiki, used by: DisGeNETLast checked upnlx_152104
iToolsResource, data access protocol, database, web service, software repository, service resource, storage service resource, software resource, data repository, data or information resourceAn infrastructure for managing of diverse computational biology resources - data, software tools and web-services. The iTools design, implementation and meta-data content reflect the broad NCBC needs and expertise (www.NCBCs.org).computational neuroscience, data, experiment control, hardware, imaging genomics, information specification, java, loni pipeline, model, ontology, os independent, metadataSCR_009626(iTools, RRID:SCR_009626)Laboratory of Neuro Imaging NCI, NCRR, NHGRI, NIBIB, NIDA, NIGMS, NIH Roadmap for Medical Research, NLMrelated to: National Centers for Biomedical Computing, listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)PMID:18509477Last checked upnlx_155852http://www.nitrc.org/projects/itools, http://www.loni.usc.edu/research/softwarehttp://itools.loni.ucla.edu/
GeneSigDBResource, data analysis service, data access protocol, database, web service, production service resource, analysis service resource, service resource, storage service resource, software resource, data repository, data or information resourceDatabase of traceable, standardized, annotated gene signatures which have been manually curated from publications that are indexed in PubMed. The Advanced Gene Search will perform a One-tailed Fisher Exact Test (which is equivalent to Hypergeometric Distribution) to test if your gene list is over-represented in any gene signature in GeneSigDB. Gene expression studies typically result in a list of genes (gene signature) which reflect the many biological pathways that are concurrently active. We have created a Gene Signature Data Base (GeneSigDB) of published gene expression signatures or gene sets which we have manually extracted from published literature. GeneSigDB was creating following a thorough search of PubMed using defined set of cancer gene signature search terms. We would be delighted to accept or update your gene signature. Please fill out the form as best you can. We will contact you when we get it and will be happy to work with you to ensure we accurately report your signature. GeneSigDB is capable of providing its functionality through a Java RESTful web service.gene, gene signature, curated gene signature, gene expression, gene expression signatureSCR_013275(GeneSigDB, RRID:SCR_013275)Dana-Farber Cancer Institute , Computational Biology and Functional Genomics Laboratory at Harvard CancerClaudia Adams Barr Foundation, Dana-Farber Cancer Institute, Genome Research Institute, NCI, NHGRI, NLM, Women's Cancers ProgramPMID:22110038Last checked upnlx_149342
Michigan Molecular InteractionsResource, data analysis service, data access protocol, production service resource, analysis service resource, database, web service, service resource, software resource, data or information resourceMiMi Web gives you an easy to use interface to a rich NCIBI data repository for conducting your systems biology analyses. This repository includes the MiMI database, PubMed resources updated nightly, and text mined from biomedical research literature. The MiMI database comprehensively includes protein interaction information that has been integrated and merged from diverse protein interaction databases and other biological sources. With MiMI, you get one point of entry for querying, exploring, and analyzing all these data. MiMI provides access to the knowledge and data merged and integrated from numerous protein interactions databases and augments this information from many other biological sources. MiMI merges data from these sources with deep integration into its single database with one point of entry for querying, exploring, and analyzing all these data. MiMI allows you to query all data, whether corroborative or contradictory, and specify which sources to utilize. MiMI displays results of your queries in easy-to-browse interfaces and provides you with workspaces to explore and analyze the results. Among these workspaces is an interactive network of protein-protein interactions displayed in Cytoscape and accessed through MiMI via a MiMI Cytoscape plug-in. MiMI gives you access to more information than you can get from any one protein interaction source such as: * Vetted data on genes, attributes, interactions, literature citations, compounds, and annotated text extracts through natural language processing (NLP) * Linkouts to integrated NCIBI tools to: analyze overrepresented MeSH terms for genes of interest, read additional NLP-mined text passages, and explore interactive graphics of networks of interactions * Linkouts to PubMed and NCIBI's MiSearch interface to PubMed for better relevance rankings * Querying by keywords, genes, lists or interactions * Provenance tracking * Quick views of missing information across databases. Data Sources include: BIND, BioGRID, CCSB at Harvard, cPath, DIP, GO (Gene Ontology), HPRD, IntAct, InterPro, IPI, KEGG, Max Delbreuck Center, MiBLAST, NCBI Gene, Organelle DB, OrthoMCL DB, PFam, ProtoNet, PubMed, PubMed NLP Mining, Reactome, MINT, and Finley Lab. The data integration service is supplied under the conditions of the original data sources and the specific terms of use for MiMI. Access to this website is provided free of charge. The MiMI data is queryable through a web services api. The MiMI data is available in PSI-MITAB Format. These files represent a subset of the data available in MiMI. Only UniProt and RefSeq identifiers are included for each interactor, pathways and metabolomics data is not included, and provenance is not included for each interaction. If you need access to the full MiMI dataset please send an email to mimi-help (at) umich.edu.gene, interaction, molecule, protein, protein interaction, protein-protein interactionSCR_003521(Michigan Molecular Interactions, RRID:SCR_003521)National Center for Integrative Biomedical Informatics Howard Hughes Medical Institute, Medical and Academic Partnerships, Michigan Center for Biological Information, Microsoft Corporation, National Center for Integrative Biomedical Informatics, NIDA, NLM, NSF, Pfizerrelated to: MiMI Plugin for CytoscapeReferences (2)Last checked upnif-0000-00214
PseudoFuNResource, data analysis service, database, analysis service resource, production service resource, service resource, data or information resourceSoftware as database and query tool for homologous pseudogene and coding gene families. Collection of human pseudogenes and gene associations. Supports search, graphical visualization and functional analysis of pseudogenes and coding genes based on PGG families.gene, pseudogene, sequence, homology, regulatory, network, miRNA, coexpression, noncoding, RNA, TCGA, cancerSCR_017095(PseudoFuN, RRID:SCR_017095)Ohio State University; Ohio; USA , Indiana University School of Medicine; Indiana; USA NLMLast checked downhttps://github.com/yanzhanglab/PseudoFuN_app
SumsDBResource, data analysis service, database, analysis service resource, production service resource, service resource, storage service resource, atlas, image repository, data repository, data or information resourceTHIS RESOURCE IS NO LONGER IN SERVICE, documented on May 11, 2016. Repository of brain-mapping data (surfaces and volumes; structural and functional data) derived from studies including fMRI and MRI from many laboratories, providing convenient access to a growing body of neuroimaging and related data. WebCaret is an online visualization tool for viewing SumsDB datasets. SumsDB includes: * data on cerebral cortex and cerebellar cortex * individual subject data and population data mapped to atlases * data from FreeSurfer and other brainmapping software besides Caret SumsDB provides multiple levels of data access and security: * Free (public) access (e.g., for data associated with published studies) * Data access restricted to collaborators in different laboratories * Owner-only access for work in progress Data can be downloaded from SumsDB as individual files or as bundles archived for offline visualization and analysis in Caret WebCaret provides online Caret-style visualization while circumventing software and data downloads. It is a server-side application running on a linux cluster at Washington University. WebCaret "scenes" facilitate rapid visualization of complex combinations of data Bi-directional links between online publications and WebCaret/SumsDB provide: * Links from figures in online journal article to corresponding scenes in WebCaret * Links from metadata in WebCaret directly to relevant online publications and figuressegmentation, volume, neuroimaging, brain, fmri, stereotaxic foci, stereotaxic coordinate, brain-mapping, foci, structural mri, mri, cerebral cortex, cerebellar cortex, afni brik, analyze, atlas, nifti, registration, rendering, spatial transformation, surface analysis, surface rendering, visualization, volume rendering, brain mapping, neuroanatomySCR_002759(SumsDB, RRID:SCR_002759)Washington University School of Medicine in St. Louis; Missouri; USA Mental disease, Neurological disorder, NormalHuman Brain Project, NASA, National Partnership for Advanced Computational Infrastructure, NCI, NIMH, NLM, NSFrelated to: Computerized Anatomical Reconstruction and Editing Toolkit, Integrated Manually Extracted Annotation, used by: NIF Data Federation, listed by: Biositemaps, NeuroImaging Tools and Resources Collaboratory (NITRC), re3data.orgLast checked downnif-0000-00016http://brainvis.wustl.edu/wiki/index.php/Sums:About http://www.nitrc.org/projects/sumsdb
REBASEResource, data analysis service, database, analysis service resource, production service resource, service resource, storage service resource, data repository, data or information resourceDatabase of information about restriction enzymes and related proteins containing published and unpublished references, recognition and cleavage sites, isoschizomers, commercial availability, methylation sensitivity, crystal, genome, and sequence data. DNA methyltransferases, homing endonucleases, nicking enzymes, specificity subunits and control proteins are also included. Several tools are available including REBsites, BLAST against REBASE, NEBcutter and REBpredictor. Putative DNA methyltransferases and restriction enzymes, as predicted from analysis of genomic sequences, are also listed. REBASE is updated daily and is constantly expanding. Users may submit new enzyme and/or sequence information, recommend references, or send them corrections to existing data. The contents of REBASE may be browsed from the web and selected compilations can be downloaded by ftp (ftp.neb.com). Additionally, monthly updates can be requested via email.endonuclease, enzyme, genome, archaeal, bacterial, cleavage, crystal, dna, individual protein family databases, isochizomer, methylation, methyltransferase, modification, protein, recognition, restriction, restriction enzyme, sensitivity, sequence, site, methylase, cleavage site, restriction-modification, blastSCR_007886(REBASE, RRID:SCR_007886)New England Biolabs New England Biolabs Inc, NLMReferences (2)Last checked upnif-0000-03391http://rebase.neb.comhttp://www.neb.com/rebase
Olfactory Receptor DataBaseResource, data analysis service, production service resource, analysis service resource, database, service resource, storage service resource, data repository, data or information resourceDatabase of vertebrate olfactory receptors genes and proteins. It supports sequencing and analysis of these receptors by providing a comprehensive archive with search tools for this expanding family. The database also incorporates a broad range of chemosensory genes and proteins, including the taste papilla receptors (TPRs), vomeronasal organ receptors (VNRs), insect olfaction receptors (IORs), Caenorhabditis elegans chemosensory receptors (CeCRs), and fungal pheromone receptors (FPRs). ORDB currently houses chemosensory receptors for more than 50 organisms. ORDB contains public and private sections which provide tools for investigators to analyze the functions of these very large gene families of G protein-coupled receptors. It also provides links to a local cluster of databases of related information in SenseLab, and to other relevant databases worldwide. The database aims to house all of the known olfactory receptor and chemoreceptor sequences in both nucleotide and amino acid form and serves four main purposes: * It is a repository of olfactory receptor sequences. * It provides tools for sequence analysis. * It supports similarity searches (screens) which reduces duplicate work. * It provides links to other types of receptor information, e.g. 3D models. The database is accessible to two classes of users: * General public www users have full access to all the public sequences, models and resources in the database. * Source laboratories are the laboratories that clone olfactory receptors and submit sequences in the private or public database. They can search any sequence they deposited to the database against any private or public sequence in the database. This user level is suited for laboratories that are actively cloning olfactory receptors.fungal, pheromone receptor, gene, chemosensory, chemosensory receptor, g protein-coupled receptor, olfaction receptor, protein, receptor, taste papilla receptor, vomeronasal organ receptor, olfactory receptor, nucleotide, amino acid, chemoreceptor sequence, olfactory receptor sequence, chemoreceptor, sequenceSCR_007830(Olfactory Receptor DataBase, RRID:SCR_007830)Yale School of Medicine; Connecticut; USA AgingHuman Brain Project, Multidisciplinary University Research Initiative, National Aeronautics and Space Administration, NIA, NICD, NIDCD, NIMH, NINDS, NLMrelated to: Odor Molecules DataBase, Monarch Initiative, Integrated Manually Extracted Annotation, used by: NIF Data Federation, listed by: 3DVCReferences (3)Last checked upnif-0000-03213
Array Information Library Universal Navigator Resource, data analysis service, resource, production service resource, analysis service resource, database, service resource, data or information resourceRe-annotated gene expression / proteomics data from GEO by relating all probe IDs to Entrez Gene IDs once every three months, enabling you to find data from GEO, and compare them from different platforms and species. Platform Annotations adds the latest annotations to any uploaded probe / gene ID list file. Platform Comparison compares any two platforms to find corresponding probes mapping to the same gene. Cross-species mapping maps platform annotations to other species. Gene Search finds deposited platforms and samples in GEO that contain a list of genes. GPL ID Search finds the GPL ID (GEO platform ID) for your array. You can also download the latest annotations files for all arrays and their comprehensive universal gene identifier table, which relates all types of gene / protein / clone identifiers to Entrez Gene IDs for all species. Note: The database was last updated on 4/30/2011. They have successfully mapped 54932732 individual probes from 385099 GEO samples measuring 3519 GEO platforms across 217 species.gene expression, gene, array, clone, probe, protein, proteomic, annotation, analytical service, probe id, comparison, microarray, probe sequence, gene identifier, annotation file, web serviceSCR_006967( Array Information Library Universal Navigator , RRID:SCR_006967)Stanford University School of Medicine; California; USA Howard Hughes Medical Institute, Lucile Packard Foundation for Childrens Health, NIDDK, NLM, Pharmaceutical Research and Manufacturers of America Foundationrelated to: Gene Expression Omnibus, Entrez GenePMID:17971777Last checked downnif-0000-33004
FMAResource, data analysis software, data processing software, database, software application, software resource, ontology, controlled vocabulary, data or information resourceA domain ontology that represents a coherent body of explicit declarative knowledge about human anatomy. It is concerned with the representation of classes or types and relationships necessary for the symbolic representation of the phenotypic structure of the human body in a form that is understandable to humans and is also navigable, parseable and interpretable by machine-based systems. Its ontological framework can be applied and extended to all other species. The description of how the OWL version was generated is in Pushing the Envelope: Challenges in a Frame-Based Representation of Human Anatomy by N. F. Noy, J. L. Mejino, C. Rosse, M. A. Musen: http://bmir.stanford.edu/publications/view.php/pushing_the_envelope_challenges_in_a_frame_based_representation_of_human_anatomy The Foundational Model of Anatomy ontology has four interrelated components: # Anatomy taxonomy (At), # Anatomical Structural Abstraction (ASA), # Anatomical Transformation Abstraction (ATA), # Metaknowledge (Mk), The ontology contains approximately 75,000 classes and over 120,000 terms; over 2.1 million relationship instances from over 168 relationship types link the FMA's classes into a coherent symbolic model.anatomy, informatics, model, neuroanatomy, protg, reference, standard, structural, taxonomy, owl, phenotypeSCR_003379(FMA, RRID:SCR_003379)University of Washington; Seattle; USA Intel Corporation, Microsoft, Murdock Charitable Trust, NHLBI, NLM, RSNA-NIBIB, University of Washington; Washington; USArelated to: T3DB, HIV Brain Sequence Database, CELDA Ontology, listed by: BioPortalReferences (3)Last checked upnif-0000-00066http://bioportal.bioontology.org/ontologies/FMA
Clair libraryResource, data analysis software, data processing software, software application, text-mining software, software resource, software toolkit, text extraction softwareA suite of open-source Perl modules intended to simplify a number of generic tasks in natural language processing (NLP), information retrieval (IR), and network analysis (NA). Its architecture also allows for external software to be plugged in with very little effort. The latest version of clairlib is 1.06 which was released on March 2009 and includes about 130 modules implementing a wide range of functionalities. Clairlib is distributed in two forms: * Clairlib-core, which has essential functionality and minimal dependence on external software, and * Clairlib-ext, which has extended functionality that may be of interest to a smaller audience. Much can be done using Clairlib on its own. Some of the things that Clairlib can do are: Tokenization, Summarization, Document Clustering, Document Indexing, Web Graph Analysis, Network Generation, Power Law Distribution Analysis, Network Analysis, RandomWalks on Graphs, Tf-IDF, Perceptron Learning and Classification, and Phrase Based Retrieval and Fuzzy OR Queries.analysis, information, linguistic, module, network, process, retrieval, perl, natural language processing, information retrieval, network analysisSCR_007019(Clair library, RRID:SCR_007019)University of Michigan; Michigan; USA NIDA, NLM, NSFlisted by: BiositemapsLast checked upnif-0000-33210
PubMedResource, database, bibliography, data or information resourcePublic bibliographic database that provides access to over 22 million citations for biomedical literature from MEDLINE, life science journals, and online books. Citations may include links to full-text content from PubMed Central and publisher web sites. PubMed citations and abstracts include fields of biomedicine and health, covering portions of life sciences, behavioral sciences, chemical sciences, and bioengineering. Provides access to additional relevant web sites and links to other NCBI molecular biology resources. Publishers of journals can submit their citations to NCBI and then provide access to full-text of articles at journal web sites using LinkOut.biomedical, literature, publication, open, access, bibliography, gold standardSCR_004846(PubMed, RRID:SCR_004846)NCBI NLMrelated to: Chilibot: Gene and Protein relationships from MEDLINE, ImpactStory, Automated recognition of brain region mentions in neuroscience literature., Information Hyperlinked Over Proteins, PubMed Central, PIE the search, Anne O'Tate, PubBrain, Europe PubMed Central, ResearchGate, CBioC, CiteAb, LitInspector, RefMED, Pubmed Commons, iBIOFind, Ensembl Variation, MEDLINE, XplorMed, Linked Neuron Data, NCBI Structure, MeSH, MEDLINE, EBIMed, Coremine Medical, NIF Literature, GoPubMed, Integrated Auto-Extracted Annotation, Polbase, Integrated Manually Extracted Annotation, DaTo, NIF Registry Automated Crawl Data, used by: Knowledgebase for Addiction Related Genes, Drug Related Gene Database, ChannelPedia, Molecular Imaging and Contrast Agent Database, Colwiz, Nowomics, PINT, listed by: OMICtools, FORCE11, LabWorm, works_with: Open Regulatory Annotation DatabaseLast checked upnlx_82958, OMICS_01195http://www.force11.org/node/4652, http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed
ClinicalTrials.govResource, database, catalog, service resource, storage service resource, data repository, clinical trial, data or information resourceRegistry and results database of federally and privately supported clinical trials conducted in United States and around world. It provides information about purpose of trial, who may participate, locations, and phone numbers for more details. This information should be used in conjunction with advice from health care professionals. ClinicalTrials.gov offers up-to-date information for locating federally and privately supported clinical trials for wide range of diseases and conditions. Research study in human volunteers to answer specific health questions. Interventional trials determine whether experimental treatments or new ways of using known therapies are safe and effective under controlled environments. Observational trials address health issues in large groups of people or populations in natural settings. ClinicalTrials.gov currently contains 116,043 trials sponsored by the National Institutes of Health, other federal agencies, and private industry. Studies listed in the database are conducted in all 50 States and in 178 countries.clinical trial, intervention, treatment, therapy, observation, drug, adverse event, result, outcome, data setSCR_002309(ClinicalTrials.gov, RRID:SCR_002309)National Library of Medicine NIH, NLMrelated to: NIMH Clinical Trials, used by: NIF Data Federation, Patients to Trials Consortium, Corengi, Biomarkers of Anti-TNF Treatment Efficacy in Rheumatoid Arthritis - Unresponsive Populations, Limited Access Datasets From NIMH Clinical Trials, Integrated Clinical Trials, Integrated Datasets, NIDDK Information Network, recommended by: National Library of Medicine, BRAIN Initiative, listed by: Monarch Initiative, OMICtools, lists: Epidemiology of Diabetes Interventions and Complications , Behavior Enhances Drug Reduction of Incontinence , Diabetes Prevention Program , Diabetes Prevention Program Outcomes Study , Folic Acid for Vascular Outcome Reduction in Transplantation , Family Investigation of Nephropathy of Diabetes , Frequent Hemodialysis Network Daily Trial , HALT PKD , HEALTHY study , RiVuR , Study of Nutrition in Acute Pancreatitis , TINSAL-T2D , Treatment Options for type 2 Diabetes in Adolescents and Youth , TOMUS , TRIGR, CATIE - Alzheimers Disease, CATIE - Clinical Antipsychotic Trials in Intervention Effectiveness, Gastroparesis Clinical Research Consortium , Diabetes Control and Complications Trial , Efficacy and Mechanisms of Glutamine Dipeptide in the Surgical Intensive Care Unit , Evaluating Predictors and Interventions in Sphincter of Oddi Dysfunction , Frequent Hemodialysis Network Nocturnal Trial , Minimally Invasive Surgical Therapies Treatment Consortium for Benign Prostatic Hyperplasia , Focal Segmental Glomerulosclerosis in Children and Young Adults Interventional Study , Complementary and Alternative Medicine for Urological Symptoms , Program to Reduce Incontinence by Diet and Exercise , TEDDY , Diabetes Prevention Type 1 , HALT-C Trial , Viral Resistance to Antiviral Therapy of Chronic Hepatitis C , Medical Therapy of Prostatic SymptomsLast checked upnif-0000-21091, OMICS_01792
The NINDS Human Cell and Data Repository (NHCDR)Resource, database, catalog, service resource, storage service resource, data repository, data or information resourceCell sources currently include fibroblasts and/or induced pluripotent stem cells for Alzheimer's Disease, Amyotrophic Lateral Sclerosis (ALS), Ataxia-telangiectasia, Frontotemporal Lobar Degeneration (FTD), Huntington's Disease, Parkinson's Disease, and healthy controls. Cell sources, including isogenic cell lines for current and new diseases covered by the NINDS will be added over the next several years.Stem, cell, fibroblast, plutipotent, isogenicSCR_016319(The NINDS Human Cell and Data Repository (NHCDR), RRID:SCR_016319)Alzheimer's Disease, Amyotrophic Lateral Sclerosis (ALS), Ataxia-telangiectasia, Frontotemporal Lobar Degeneration (FTD), Huntington's Disease, Parkinson's DiseaseNINDS, NLMrecommended by: National Library of Medicine, BRAIN InitiativeLast checked up
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