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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

(last updated: Sep 14, 2019)

Physical Resource or Software Tool Software

580 Results - per page

Resource NameResource TypeDescriptionKeywordsResource IDProper CitationParent OrganizationRelated ConditionFunding AgencyRelationReferenceWebsite StatusAlternate IDsAlternate URLsOld URLs
National Organization for Rare Disorders (NORD)Resource, portal, data or information resourceAn organization which supports those with rare diseases and those researching rare diseases.rare disease, organizationSCR_014572(National Organization for Rare Disorders (NORD), RRID:SCR_014572)Rare diseaseLast checked down
Joslin Diabetes Center Bioinformatics and Biostatistics CoreResource, service resource, resource, core facility, access service resourceCore that offers support for data-driven projects related to basic, clinical and translational research, with a particular emphasis on diabetes. The core aims to ensure that researchers take advantage of the most modern and robust methods available in the field of Bioinformatics and Biostatistics.Joslin Diabetes Center, JDC, bioinformatics, serice, diabetes, bioinformatics, omicSCR_015092(Joslin Diabetes Center Bioinformatics and Biostatistics Core, RRID:SCR_015092) Joslin Diabetes Center DiabetesDKlisted by: NIDDK Information NetworkLast checked downhttps://joslinresearch.org/drc-cores/Bioinformatics-Core
George M. O'Brien Kidney Center at Yale Resource, disease-related portal, topical portal, resource, service resource, portal, access service resource, data or information resourceCenter that facilitates translational and clinical research that will advance the prevention and treatment of kidney diseases.kidney disease, clinical researchSCR_015294( George M. O'Brien Kidney Center at Yale , RRID:SCR_015294)Yale School of Medicine; Connecticut; USA kidney diseaseNIDDKlisted by: NIDDK Information NetworkLast checked down
George M. O'Brien Kidney Center at Yale Renal Physiology Core Resource, service resource, resource, core facility, access service resourceCore provides specialized services and training for assessing renal function in small animals at the level of single tubules in vitro and in vivo (e.g. micropuncture, microperfusion, and tubule-specific microdissection), the whole kidney (e.g. clearance studies in anesthetized animals, perfusion fixation for histology studies), and the intact organism (e.g. balance studies in metabolic cages, acute and chronic BP measurements).phenotyping assays, renal physiology, microperfusionSCR_015296( George M. O'Brien Kidney Center at Yale Renal Physiology Core , RRID:SCR_015296) Yale School of Medicine; Connecticut; USA , George M. O'Brien Kidney Center at Yale NIDDKlisted by: NIDDK Information NetworkLast checked down
Cystic Fibrosis Center University of Pittsburgh Resource, disease-related portal, topical portal, resource, service resource, portal, access service resource, data or information resourceResearch center whose goal is to understand and translate the basic mechanisms of cystic fibrosis. It uses the molecular and cell biology of CFTR, CFTR mutants, infection, and inflammation with the overall theme of translating preclinical science into clinical investigations.cystic fibrosis mechanism, cystic fibrosis translational research, cystic fibrosis researchSCR_015400( Cystic Fibrosis Center University of Pittsburgh , RRID:SCR_015400)University of Pittsburgh; Pennsylvania; USA Cystic FibrosisCystic Fibrosis Foundation Research Development Program, NIDDKlisted by: NIDDK Information NetworkLast checked down
New York Obesity Nutrition Research Center Resource, disease-related portal, topical portal, resource, service resource, portal, access service resource, data or information resourceObesity research center which provides access to core facilities, seminars, and collaborations for researchers.obesity research center, obesity portalSCR_015442( New York Obesity Nutrition Research Center , RRID:SCR_015442)Columbia University; New York; USA ObesityNIDDKlisted by: NIDDK Information NetworkLast checked down
Boston University Alzheimer's Disease Center - NeuropathologyResource, access service resource, database, biomaterial supply resource, core facility, tissue bank, service resource, brain bank, storage service resource, material storage repository, material resource, data or information resourceThe Neuropathology Core leads neuropathological analyses of brains donated by research registry participants of the Boston University Alzheimer's Disease Center. The Core works with the Clinical Core to carry out the Brain Tissue Donation Program, which provides brain tissue for analyses that will help to understand the underlying pathology of AD. The Core also works closely with the Data Management and Statistics Core to maintain a comprehensive computerized database of information resulting from neuropathological analyses. The Boston University Brain Bank of the Neuropathology Core documents neuropathological findings of Center research registry participants, but also of brain donors from important related BUSM studies such as the Framingham Heart Study and the Centenarian Study.alzheimers disease, brain tissue, clinical data, brain bank, database, material storage repository, core facilitySCR_000513(Boston University Alzheimer's Disease Center - Neuropathology, RRID:SCR_000513)Boston University Alzheimer's Disease Center Alzheimer's diseaseNational Institute on Aginglisted by: One Mind Biospecimen Bank ListingLast checked downnlx_33878
AZ Core LabsResource, service resource, core facility, access service resourceA core facility which provides fee-based sample imaging and analysis using analytical and microscopy equipment to technology incubator clients, university researchers, and industry.core facility, arizona, imaging service, analysis service, technology incubator, research, industrySCR_001036(AZ Core Labs, RRID:SCR_001036)listed by: Science ExchangeLast checked downSciEx_12874http://www.azbio.org/member-directory/az-core-labshttp://www.scienceexchange.com/facilities/az-core-labs
PNA BioResource, service resource, production service resourceA company which provides peptide nucleic acid products for use in research. It also provides engineered nuclease services to laboratories.peptide nucleic acid, commercial, lab services, production service resourceSCR_001037(PNA Bio, RRID:SCR_001037)listed by: Science ExchangeLast checked downSciEx_13409http://www.scienceexchange.com/facilities/pna-bio
Eddy Lab SoftwareResource, software resource, software repositorySoftware library containing tools for statistical manipulations of data. Tools include profile hidden Markov models for biological sequence analysis, RNA structure analysis, and a prototype noncoding RNA genefinder.software repository, statistics, data, statistical analysis, statistical manipulation, markov modelSCR_001458(Eddy Lab Software, RRID:SCR_001458)Janelia Research , Howard Hughes Medical Institute Last checked downnif-0000-08778http://selab.janelia.org/software.html
Korea Advanced Institute of Science and Technology; Daejeon; South KoreaResource, regional funding resource, portal, funding resource, data or information resourceInstitute dedicated to research in science and technology in South Korea modeled after a research university.south korea, research, science, technologySCR_001902(Korea Advanced Institute of Science and Technology; Daejeon; South Korea, RRID:SCR_001902)Last checked downnlx_155859http://www.kaist.edu/english/
Neuroscience Information FrameworkResource, database, software application, software development tool, portal, storage service resource, service resource, software resource, data repository, systems interoperability software, data or information resourceFramework for identifying, locating, relating, accessing, integrating, and analyzing information from neuroscience research. Users can search for and add neuroscience-related resources at the NIF portal and receive and RRID to track and cite resources within scientific manuscripts.neuroscience, bioinformatics, data sharing, metadata standard, ontology, resource, registry, literature, grant, service, software, neuinfo, cerebral circulation, neuron, antibody diversity, neuroanatomy, atlasSCR_002894(Neuroscience Information Framework, RRID:SCR_002894)University of California at San Diego; California; USA NIDArelated to: NIDDK Information Network, SciCrunch, SciCrunch Registry, SenseLab, Linked Neuron Data, Whole Brain Catalog, uses: UBERON, recommends: Resource Identification Portal, listed by: FORCE11, OMICtools, re3data.org, National Institute of Mental Health, lists: Monarch Initiative, submitted: Université de La Réunion - UMR1188 DéTROI, LCModel, Zinc deficiency induces apoptosis via mitochondrial p53- and caspase-dependent pathways in human neuronal precursor cells, Neuroscience Information Toolbox, pubatlas.org, KnowledgeSpace, Test resource submission, MRC Psycholinguistic Database, ENIGMA-DTI Pipeline, MicroDraw, Open Neuroimaging Laboratory, BrainBox, MetaSearch, Umea Brain Arteries, BluePyOpt, 499 fROI atlas, 90 fROI atlas, Digimizer, Brain Networks Toolbox, MultiXplore, GingerALE, Epilepsy T1 and Hippocampal Segmentation Datasets, Group Sparse Canonical Correlation Analysis, ICASSO, Nexus, Bodybuilder, test resource, pCASL Analysis, Online Master of Science in Clinical Research Management, Online Master of Science in Clinical Research Management, Atomify LAMMPS, Neuromembrane Simulator, Neurodata Without Borders, WholeBrain, Ilastik, Mixed Effect Model of Genetic-Set and Environment Interaction, Template Project, PREDiCT, TurboFIRE, BCBtoolkit, NIAG Addiction Data, MOCA, UManitoba - JHU Functionally Defined Human White Matter Atlas, VALiDATe29 Squirrel Monkey Brain Atlas, MPlus, NITRC Image Repository (NITRC-IR), Challenge Competitions Collection, Functional Network Connectivity (FNC), SpiCoDyn, MVGC Multivariate Granger Causality Matlab Toolbox, Neuroscience Gateway (NSG), p-[(123)I]iodo-L-phenylalanine (IPA)-SPECT template in MNI-coordinates, Quantum Biology Institute, Braineac, UK Brain Expression Consortium, ICN_Atlas, ReproNim: A Center for Reproducible Neuroimaging Computation, Gannet, METH, Linear Fascicle Evaluation, GAAIN toolset, Mapping Population-based Structural Connectomes, Virtual Digital Brain, Longitudinal neuroimaging hippocampal markers for diagnosing Alzheimer's disease, Altered States Database, Canadian Open Neuroscience Platform, Suite2P, Primate Data Exchange, Nornir, Tests for deviation from Hardy-Weinberg equilibrium , brainlife.io, User Friendly Functional Connectivity - UF²C, New York Medical College, MouseLight Project, QuickNII, NineML, ?ryptogram [????????????], Gradov's Initiative Scientific Instrumentation Group, INEPCP [before 2016], Intra- and inter-scanner reliability of RS-fMRI BOLD and ASL with eyes closed vs. eyes open, SynGOReferences (2)Last checked downnif-0000-25673, OMICS_01190https://www.force11.org/node/4695
Pristionchus.orgResource, data analysis service, production service resource, analysis service resource, database, service resource, data or information resourceThis data resource is a genetic, molecular, and genomic toolkit that establishes one particular species, Pristionchus pacificus, as a major satellite system for evolutionary developmental biology. Users may download Pristionchus Sequences and use the Pristionchus pacificus genome browser where they may find gene or gene prediction data. Users can also use the BLAST feature, which allows users to search the assembly for position information of bacs, reads and contigs using the mapping tool. The center of the site's research is the evolutionary analysis of vulva formation. The general aim of the Department is to develop the nematode vulva as a suitable case study into the evolutionary alterations of developmental processes. By studying and comparing two distantly related species of the same phylum, such as P. pacificus and C. elegans, macroevolutionary alterations of developmental processes and mechanisms can be identified. The final goal of the Department is to achieve a comprehensive description of macro- and microevolutionary changes of developmental mechanisms at the molecular level in a phylogenetic and ecological context.pristionchus, pristionchus pacificus, database, data analysis service, genetic toolkit, molecular toolkit, genomic toolkitSCR_003414(Pristionchus.org, RRID:SCR_003414)Max Planck Institute for Developmental Biology; Tubingen; Germany Last checked downnif-0000-03339
Cooperative Human Tissue NetworkResource, biomaterial supply resource, material resource, tissue bankThe Cancer Diagnosis Program of the National Cancer Institute (NCI) initiated the Cooperative Human Tissue Network (CHTN) in 1987 to provide increased access to human tissue for basic and applied scientists from academia and industry to accelerate the advancement of discoveries in cancer diagnosis and treatment. This unique resource provides remnant human tissues and fluids from routine procedures to investigators who utilize human biospecimens in their research. Unlike tissue banks, the CHTN works prospectively with each investigator to tailor specimen acquisition and processing to meet their specific project requirements. Because the CHTN is funded by the NCI, the CHTN is able to maintain nominal processing fees for its services. The CHTN is comprised of five adult divisions and one pediatric division. Each of the adult divisions coordinates investigator applications/requests based upon the investigator's geographic location within North America. The Pediatric Division manages all investigators who request pediatric specimens only. The CHTN divisions share coordination for requests from outside North America. The CHTN divisions work both independently with individual investigators and together as a seamless unit to fulfill requests that are difficult to serve by any single division. The CHTN's unique informatics system allows each division to effectively communicate and network the needs of its investigators to all CHTN divisions. The Network as a whole can then help fulfill an investigator's request. Biospecimens from surgeries, autopsies and other routine procedures: Malignant, Benign, Diseased, Normal, Biofluids (urine, serum, plasma, buffy coat) High quality specimens at LOW processing fees: Fresh, Frozen, Floating in fixative, RNAlater, Paraffin embedded or and/or unstained slidesbiomaterial supply resource, human tissue, network, cancer, NCISCR_004446(Cooperative Human Tissue Network, RRID:SCR_004446)NCIrelated to: UAB SPORE Biorepository Banks, University of Alabama, Alabama, USA, University of Pennsylvania, Philadelphia, Pennsylvania, University of Virginia, Virginia, USA, Ohio State University College of Medicine, Ohio, USA, Vanderbilt University, Tennessee, USA, listed by: One Mind Biospecimen Bank ListingLast checked downnlx_44126http://www.chtn.nci.nih.gov/
Duke University Kathleen Price Bryan Brain BankResource, biomaterial supply resource, biospecimen repository, tissue bank, service resource, brain bank, storage service resource, material resource, material storage repositoryA research repository of human brains with neurological disorders and normal controls, recruited through the Autopsy and Brain Donation Program coordinator. The Kathleen Price Bryan Brain Bank contains brains from patients with Alzheimer's disease, Parkinson's disease, Amyotrophic Lateral Sclerosis, Huntington's disease, Muscular Dystrophy, and other neurological and dementing disorders. The brain tissue is subjected to a detailed neuropathological evaluation and then stored as fixed and frozen hemispheres, paraffin blocks and histological slides. After receipt of an IRB approved request, tissue is supplied to investigators at Duke University, major medical centers and pharmaceutical companies across the United States and worldwide.brain, tissue, brain bank, biospecimen repository, spinal cord, cerebral spinal fluid, dna, fixed hemisphere, frozen hemispheres, paraffin block, histological slide, neurological disorder, alzheimer's disease, parkinson's disease, huntington's disease, dementing disorder, muscular dystrophySCR_005022(Duke University Kathleen Price Bryan Brain Bank, RRID:SCR_005022)Joseph and Kathleen Bryan Alzheimer's Disease Research Center Neurological disorder, Normal control, Alzheimers disease, Dementing disorder, Parkinsons disease, Amyotrophic Lateral Sclerosis, Huntingtons disease, Muscular DystrophyNIAlisted by: One Mind Biospecimen Bank ListingLast checked downnlx_144011
Kyoto Stock CenterResource, biomaterial supply resource, material resource, organism supplierAn organism supplier which collects stocks collects Drosophila stocks from laboratories all over the world, maintains them, and provides them to researchers upon request.organism supplier, drosophila, genomics, genetic resourceSCR_008469(Kyoto Stock Center, RRID:SCR_008469)used by: Integrated AnimalsLast checked downnif-0000-30415
Mayo Alzheimer's Disease Research CenterResource, department portal, organization portal, portal, data or information resourceA clinical research department that specializes in the study of Alzheimer's disease. The Mayo Clinic Alzheimer's Disease Research Center conducts many types of research studies related to dementia, as well as normal or successful aging. The purpose of the center is to provide care for dementia patients and promote research and education on Alzheimer's Disease and related dementias.alzheimer's disease, mild cognitive impairment, early dementia, lewy body dementia, dementia, normal control, late adult human, healthy, memory, neuroimaging, department portalSCR_008727(Mayo Alzheimer's Disease Research Center, RRID:SCR_008727)Mayo Clinic Florida; Florida; USA , Mayo Clinic Minnesota; Minnesota; USA AgingNIALast checked downnlx_144139http://mayoresearch.mayo.edu/mayo/research/alzheimers_center/index.cfm
Brain Research Institute Biobank ResourcesResource, biomaterial supply resource, image collection, tissue bank, brain bank, material resource, data or information resourceBrain bank resources which include postmortem human frozen brain tissue and matched cerebrospinal fluid (CSF) and blood available for scientists to search for etiopathogeneses of human disease. The National Neurological Research Specimen Bank and the Multiple Sclerosis Human Neurospecimen Bank maintains a collection of quick frozen and formalin fixed postmortem human brain tissue and frozen cerebrospinal fluid from patients with neurological diseases, including Alzheimer's Disease, amyotrophic lateral sclerosis, depressive disorder/suicide, and epilepsy, among others. Diagnoses are documented by clinical medical records and gross/microscopic neuropathology. The Neuropathology Laboratory at the UCLA Medical Center maintains a bank of frozen, formalin and paraformaldehyde-fixed and paraffin-embedded postmortem human brain tissues and frozen cerebrospinal fluid (CSF) from patients who die with Alzheimer's disease and other dementing and degenerative illnesses, as well as control materials removed in a similar fashion from patients who are neurologically normal.postmortem, brain, coronal, brain tissue, cerebral spinal fluid, blood, cerebral spinal fluid cell, cell-free cerebral spinal fluid, serum, plasma, buffy coat, frozen, formalin fixed, paraformaldehyde-fixed, paraffin-embedded, neurological disease, alzheimer's disease, amyotrophic lateral sclerosis, depressive disorder, suicide, epilepsy, huntington's disease, multiple sclerosis, parkinson's disease, progressive supranuclear palsy, schizophrenia, stroke, cerebrovascular accident, fronto-temporal dementia, neurologically normal, coronal section, control, clinical dataSCR_008756(Brain Research Institute Biobank Resources, RRID:SCR_008756)Brain Research Institute Neurological disease, Alzheimer's disease, Amyotrophic Lateral Sclerosis, Depressive Disorder, Suicide, Epilepsy, Huntington's disease, Multiple Sclerosis, Parkinson's disease, Progressive Supranuclear Palsy, Schizophrenia, Stroke, Cerebrovascular Accident, Fronto-temporal dementia, AgingNational MS Society, NIA, NIMH, NINDS, United States Department of Veterans Affairs, Veterans Affairs West Los Angeles Healthcare Centerlisted by: One Mind Biospecimen Bank ListingLast checked downnlx_143996http://www.bri.ucla.edu/bri_research/research_resources.asp
Index to Marine and Lacustrine Geologic SamplesResource, material resourceA repository of geologic material from sea floor and lakebed cores, grabs, and dredges archived by participating institutions.sea floor, lakebed, grab, dredge, geologic material, geologic materialSCR_009430(Index to Marine and Lacustrine Geologic Samples, RRID:SCR_009430)National Oceanic and Atmospheric Administration listed by: CINERGIDOI:10.7289/V5H41PB8Last checked downnlx_154736http://seabedsamples.org
Vanderbilt Diabetes Research and Training Center Vanderbilt Diet Body Composition and Metabolism Core Resource, service resource, resource, core facility, access service resourceCore facility that provides training and expertise in nutrition/diet methodology to obtain valid and reliable assessment and analyses of dietary intakes, nutritional status, body composition and metabolism.diabetes, nutrition methodology, body composition, metabolismSCR_010191( Vanderbilt Diabetes Research and Training Center Vanderbilt Diet Body Composition and Metabolism Core , RRID:SCR_010191)Vanderbilt University; Tennessee; USA , Vanderbilt Diabetes Research and Training Center DiabetesNIDDKlisted by: Eagle I, NIDDK Information NetworkLast checked downnlx_156670
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