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on page 1 showing 20 out of 542 results

    MRH

Cite this (MRH, RRID:SCR_000841)

URL: http://www-rcf.usc.edu/~gqian/software.htm (not available)

Resource Type: Resource, software resource, software application

Software application (entry from Genetic Analysis Software)

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    GLIDERS

Cite this (GLIDERS, RRID:SCR_009210)

URL: http://mather.well.ox.ac.uk/GLIDERS/

Resource Type: Resource, software resource, software application

THIS RESOURCE IS NO LONGER IN SERVCE, documented September 6, 2016.

  • From Current Category

Cite this (PEDIGREE-VISUALIZER, RRID:SCR_000842)

URL: http://research.i2r.a-star.edu.sg:8080/kleisli/demos/pedigree/

Resource Type: Resource, software resource, software application

Software application (entry from Genetic Analysis Software)

  • From Current Category

    PEDPHASE

Cite this (PEDPHASE, RRID:SCR_000843)

URL: http://vorlon.case.edu/~jxl175/haplotyping.html

Resource Type: Resource, software resource, software application

Software application for inferring haplotypes from genotypes on pedigree data (entry from Genetic Analysis Software)

  • From Current Category

Cite this (HOTSPOTTER, RRID:SCR_009238)

URL: http://www.biostat.umn.edu/~nali/SoftwareListing.html

Resource Type: Resource, software resource, software application

Software application that implements the PAC (Products of Approximate Conditional) model for estimating recombination rate (entry from Genetic Analysis Software)

  • From Current Category

    LOCUSMAP

Cite this (LOCUSMAP, RRID:SCR_000840)

URL: http://animalgene.umn.edu/locusmap/index.html

Resource Type: Resource, software resource, software application

Software package designed for rapid linkage analysis and map construction of loci with a variety of inheritance modes. (entry from Genetic Analysis Software)

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    HAP 1

Cite this (HAP 1, RRID:SCR_000837)

URL: http://research.calit2.net/hap/

Resource Type: Resource, software resource, software application

Software application (entry from Genetic Analysis Software)

  • From Current Category

    CRIMAP

Cite this (CRIMAP, RRID:SCR_000834)

URL: http://compgen.rutgers.edu/crimap.shtml

Resource Type: Resource, software resource, software application

Software application for constructing multilocus linkage map (entry from Genetic Analysis Software)

  • From Current Category

    2LD

Cite this (2LD, RRID:SCR_000826)

URL: https://github.com/gaow/genetic-analysis-software/blob/master/pages/2LD.md

Resource Type: Resource, software resource, software application

THIS RESOURCE IS NO LONGER IN SERVCE, documented September 22, 2016. Software program for calculating linkage disequilibrium (LD) measures between two polymorphic markers.

  • From Current Category

Cite this (DCHIP LINKAGE, RRID:SCR_000835)

URL: http://www.biostat.harvard.edu/complab/dchip/snp.htm

Resource Type: Resource, software resource, software application

THIS RESOURCE IS NO LONGER IN SERVCE, documented September 22, 2016.

  • From Current Category

    SOLAR

Cite this (SOLAR, RRID:SCR_000850)

URL: http://solar-eclipse-genetics.org

Resource Type: Resource, software resource, software application

A flexible and extensive software package for genetic variance components analysis, including linkage analysis, quantitative genetic analysis, and covariate screening. Operations are included for calculation of marker-specific or multipoint identity-by-descent (IBD) matrices in pedigrees of arbitrary size and complexity, and for linkage analysis of quantitative traits which may involve multiple loci (oligogenic analysis), dominance effects, and epistasis. (entry from Genetic Analysis Software)

  • From Current Category

Cite this (HWESTRATA, RRID:SCR_001097)

URL: http://mayoresearch.mayo.edu/mayo/research/schaid_lab/software.cfm

Resource Type: Resource, software resource, software application

Software application that calculates an exact stratified test for HWE for diallelic markers, such as single nucleotide polymorphisms (SNPs), and an exact test for homogeneity of Hardy Weinberg disequilbrium. In addition, exact tests for HWE are calculated for each stratum. (entry from Genetic Analysis Software)

  • From Current Category

Cite this (HAPLOTYPE ESTIMATION, RRID:SCR_009231)

URL: http://www.bioinf.mdc-berlin.de/projects/hap/

Resource Type: Resource, software resource, software application

Haplotype estimation service available in two variants: one for genetic data from unrelated probands (e.g., case/control studies) and one for core family data (entry from Genetic Analysis Software)

  • From Current Category

Cite this (EIGENSOFT/EIGENSTRAT, RRID:SCR_001357)

URL: http://www.hsph.harvard.edu/faculty/alkes-price/software/

Resource Type: Resource, software resource, software application

Software application (entry from Genetic Analysis Software)

  • From Current Category

    POWER

Cite this (POWER, RRID:SCR_009057)

URL: http://dceg.cancer.gov/tools/design/power

Resource Type: Resource, software resource, software application

Windows-based program for computation of sample size and power for binary outcome studies (case-control and cohort studies) based on a logistic-like regression model with one covariate or two covariates (e.g., gene-exposure interactions). (entry from Genetic Analysis Software)

  • From Current Category

    OSA

Cite this (OSA, RRID:SCR_002016)

URL: http://wwwchg.duhs.duke.edu/research/osa.html

Resource Type: Resource, software resource, software application

Software application that allows the researcher to evaluate evidence for linkage even when heterogeneity is present in a data set. This is not an unusual occurrence when studying diseases of complex origin. Families are ranked by covariate values in order to test evidence for linkage among homogeneous subsets of families. Because families are ranked, a priori covariate cutpoints are not necessary. Covariates may include linkage evidence at other genes, environmental exposures, or biological trait values such as cholesterol, age at onset, and so on.

  • From Current Category

    IGG

Cite this (IGG, RRID:SCR_009114)

URL: https://github.com/gaow/genetic-analysis-software/blob/master/pages/IGG.md

Resource Type: Resource, software resource, software application

THIS RESOURCE IS NO LONGER IN SERVCE, documented September 22, 2016.

  • From Current Category

    ZAPLO

Cite this (ZAPLO, RRID:SCR_009426)

URL: http://www.molecular-haplotype.org/zaplo/zaplo_index.html

Resource Type: Resource, software resource, software application

THIS RESOURCE IS NO LONGER IN SERVCE, documented September 6, 2016.

  • From Current Category

    HTSNPER

Cite this (HTSNPER, RRID:SCR_009242)

URL: http://www.chgb.org.cn/htSNPer/htSNPer.html

Resource Type: Resource, software resource, software application

Java program for characterizing the haplotype block structure and selecting haplotype tagging SNP (entry from Genetic Analysis Software)

  • From Current Category

    GDA

Cite this (GDA, RRID:SCR_009187)

URL: http://hydrodictyon.eeb.uconn.edu/people/plewis/software.php

Resource Type: Resource, software resource, software application

Software application designed to accompany the second edition of Bruce Weir''s book Genetic Data Analysis (1996. Sinauer Associates) (entry from Genetic Analysis Software)

  • From Current Category

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