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3D DTI Atlas of the Rat Brain In Postnatal Day 5 14 and Adulthood (RRID:SCR_009437)

3D DTI anatomical rat brain atlases have been created by the UNC- Chapel Hill Department of Psychiatry and the CAMID research collaboration. There are three age groups, postnatal day 5, postnatal day 14, and postnatal day 72. The subjects were Sprague-Dawley rats that were controls in a study on cocaine abuse and development. The P5 and P14 templates were made from scans of twenty rats each (ten female, ten male); the P72, from six females. The individual cases have been resampled to isotropic resolution, manually skull-stripped, and deformably registered via an unbiased atlas building method to create a template for each age group. Each template was then manually segmented using itk-SNAP software. Each atlas is made up of 3 files, a template image, a segmentation, and a label file.


magnetic resonance, adult rat, newborn rat, infant rat, young rat, sprague dawley, male, female

Resource ID


Alternate IDs


Related Condition

Control, Normal

Website Status

Last checked up


3D DTI Atlas of the Rat Brain



Resource Type

Resource, atlas, reference atlas, data or information resource

Funding Information

UNC Neurodevelopment Disorders Research Center, NICHD | HD 03110, NINDS | R41 NS059095, NIDA | IP01DA022446-02


3-Dimensional Diffusion Tensor Imaging (DTI) Atlas of the Rat Brain In Postnatal Day 5 14 and Adulthood

Proper citation

(3D DTI Atlas of the Rat Brain In Postnatal Day 5 14 and Adulthood, RRID:SCR_009437)

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