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URL: http://122.228.158.106/BSSim/
Proper Citation: BSSim (RRID:SCR_001212)
Description: Software to mimic various methylation level and bisulfite conversion rate in CpG, CHG and CHH context, respectively. It can also simulate genetic variations that are divergent from the reference sequence along with the sequencing error and quality distributions. In the output, both directional/non-directional, various read length, single/paired-end reads and alignment data in the SAM format can be generated. BSSim is a cross-platform BS-seq simulator offers output read datasets not only suitable for Illumina's Solexa, but also for Roche's 454 and Applied Biosystems' SOLiD.
Abbreviations: BSSim
Synonyms: BSSim: Bisulfite sequencing simulator for next-generation sequencing
Resource Type: software resource
Keywords: bisulfite sequencing, simulator, next-generation sequencing, python, dna methylation, snp, read quality
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