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Resource Name
RRID:SCR_003032 RRID Copied      
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Cytoscape (RRID:SCR_003032)
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Resource Information

URL: http://cytoscape.org

Proper Citation: Cytoscape (RRID:SCR_003032)

Description: Software platform for complex network analysis and visualization. Used for visualization of molecular interaction networks and biological pathways and integrating these networks with annotations, gene expression profiles and other state data.

Synonyms: Complex Network Analysis Visualization, Cytoscape 2.6, Cytoscape 3.0

Resource Type: software resource, data visualization software, software application, data processing software, data analysis software

Defining Citation: PMID:21149340, PMID:14597658

Keywords: biological, network, visualization, analysis, data, gene, pathway, molecular, interaction, FASEB list

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This resource

is used by

CytoSPADE

is used by

HDBase

is used by

DisGeNET

is used by

categoryCompare

lists

PEPPER

is listed by

Debian

is listed by

SoftCite

is related to

PhosphoSitePlus: Protein Modification Site

is related to

TRIP Database

is related to

CoryneRegNet

is related to

AltAnalyze - Alternative Splicing Analysis Tool

is related to

MiMI Plugin for Cytoscape

is related to

Network Data Exchange (NDEx)

is related to

GeneMANIA

is related to

DroID - Drosophila Interactions Database

is related to

Network-based Prediction of Human Tissue-specific Metabolism

is related to

Biological General Repository for Interaction Datasets (BioGRID)

is related to

DaTo

is related to

PiNGO

is related to

iBIOFind

is related to

cPath

is related to

BiNGO: A Biological Networks Gene Ontology tool

is related to

ClueGO

is related to

RamiGO

is related to

EGAN: Exploratory Gene Association Networks

has parent organization

Institute for Systems Biology; Washington; USA

has parent organization

University of California at San Diego; California; USA

is parent organization of

JEPETTO

has plug in

CluePedia Cytoscape plugin

has plug in

CytoSPADE

has plug in

EnrichmentMap

has plug in

cytoHubba

works with

NetCirChro

works with

IMEx - The International Molecular Exchange Consortium

Usage and Citation Metrics
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