URL: https://github.com/ngaggion/ChronoRoot
Proper Citation: ChronoRoot (RRID:SCR_021259)
Description: System which combines 3D printed open hardware with deep segmentation networks for high temporal resolution phenotyping of plant roots in agarized medium. Deep learning based root extraction method which leverages the latest advances in convolutional neural networks for image segmentation, and incorporates temporal consistency into the root system architecture reconstruction process.
Resource Type: time-series analysis software, image processing software, 2d time-series analysis software, software resource, software application, data processing software, data analysis software
Keywords: 3D printed open hardware, deep segmentation networks, high temporal resolution phenotyping, plant roots, convolutional neural networks, image segmentation
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