URL: http://arabidopsis.med.ohio-state.edu
Proper Citation: Arabidopsis Gene Regulatory Information Server (RRID:SCR_006928)
Description: An information resource of Arabidopsis promoter sequences, transcription factors and their target genes that contains three databases. *AtcisDB consists of approximately 33,000 upstream regions of annotated Arabidopsis genes (TAIR9 release) with a description of experimentally validated and predicted cis-regulatory elements. *AtTFDB contains information on approximately 1,770 transcription factors (TFs). These TFs are grouped into 50 families, based on the presence of conserved domains. *AtRegNet contains 11,355 direct interactions between TFs and target genes. They provide free download of Arabidopsis thaliana cis-regulatory database (AtcisDB) and transcription factor database (AtTFDB).
Abbreviations: AGRIS
Resource Type: data or information resource, database
Defining Citation: PMID:21059685, PMID:16524982, PMID:12820902
Keywords: gene regulatory, gene, arabidopsis thaliana, promoter sequence, target gene, transcription factor, FASEB list
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