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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00028702
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00005023(sqv-5)
Genomic Alteration: WBGene00005023(sqv-5)
Availability: available
References:
Synonyms: sqv-5(k175) I.
Alternate IDs: WB-STRAIN:NF199, CGC_NF199
Notes: DTC migration defect.
Proper citation: RRID:WB-STRAIN:WBStrain00028702 Copy
http://www.wormbase.org/db/get?name=WBStrain00028704
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003254(mig-23)
Genomic Alteration: WBGene00003254(mig-23)
Availability: available
References:
Synonyms: mig-23(k180) X.
Alternate IDs: WB-STRAIN:NF317, CGC_NF317
Notes: Distal tip cell migration defective. Tc1 insertion mutant. Spontaneous mutant with ventral white patch phenotype.
Proper citation: RRID:WB-STRAIN:WBStrain00028704 Copy
http://www.wormbase.org/db/get?name=WBStrain00028787
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:NIC200
Notes: Isotype: NIC199|"Reference_strain: False"|"Sequenced: True"
Proper citation: RRID:WB-STRAIN:WBStrain00028787 Copy
http://www.wormbase.org/db/get?name=WBStrain00028781
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:NIC166
Notes: Isotype: NIC166|"Reference_strain: True"|"Sequenced: True"
Proper citation: RRID:WB-STRAIN:WBStrain00028781 Copy
http://www.wormbase.org/db/get?name=WBStrain00028782
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:NIC195
Notes: Isotype: NIC195|"Reference_strain: True"|"Sequenced: True"
Proper citation: RRID:WB-STRAIN:WBStrain00028782 Copy
http://www.wormbase.org/db/get?name=WBStrain00028780
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:NIC4
Notes: Isotype: NIC3|"Reference_strain: False"|"Sequenced: True"
Proper citation: RRID:WB-STRAIN:WBStrain00028780 Copy
http://www.wormbase.org/db/get?name=WBStrain00028774
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001184(egl-15)|WBGene00003056(lon-2)
Genomic Alteration: WBGene00001184(egl-15), WBGene00003056(lon-2)
Availability: available
References:
Synonyms: +/szT1 [lon-2(e678)] I; egl-15(n1456)/szT1 X.
Alternate IDs: WB-STRAIN:NH2693, CGC_NH2693
Notes: Heterozygotes are WT and segregate WT, Lon Males, early L1 larval arrested animals (n1456 homozygotes) and dead eggs. n1456 is an early nonsense mutation in the extracellular domain of EGL-15/FGFR (Q268 STOP).|"Made_by: R. Burdine"
Proper citation: RRID:WB-STRAIN:WBStrain00028774 Copy
http://www.wormbase.org/db/get?name=WBStrain00028775
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001184(egl-15)|WBGene00003559(ncl-1)
Genomic Alteration: WBGene00001184(egl-15), WBGene00003559(ncl-1)
Availability: available
References:
Synonyms: ncl-1(e1865) III; egl-15(n1456) X; ayEx86.
Alternate IDs: WB-STRAIN:NH3027, CGC_NH3027
Notes: ayEx86 [col-19::GFP + egl-15(+) (NH#112) + ncl-1(+)(c33c3)]. Maintain by picking non-Egl. Referene: Lo TW, et al. Dev Biol. 2008 Jun 15;318(2):268-75.|"Made_by: Catherine Branda"
Proper citation: RRID:WB-STRAIN:WBStrain00028775 Copy
http://www.wormbase.org/db/get?name=WBStrain00028776
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00018788(shc-1)
Genomic Alteration: WBGene00018788(shc-1)
Availability: available
References:
Synonyms: F54A5.3a(ok198) I.
Alternate IDs: WB-STRAIN:NH3119, CGC_NH3119
Notes: Mutagen:UV/TMP|"No obvious phenotype. The primers used to isolate (ok198)were: LS969.E1: TGAGCTCGGAGATGTTGCT; LS969.E2: CCGGTCATTCCTCATTCACT; LS969.I1: GGGAGGGTCTTACGTTGTGA; LS969.I2: GTCGAAAAATCAACTTGCGG; The deletion band runs at about 2000bp. The wt band (based on the inside primers) is 3195bp making the deletion about 1200bp of the gene F54A5.3."
Proper citation: RRID:WB-STRAIN:WBStrain00028776 Copy
http://www.wormbase.org/db/get?name=WBStrain00028723
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: vlcEx800.
Alternate IDs: WB-STRAIN:NFB1352, CGC_NFB1352
Notes: Made_by: Carla Lloret & Carlos Mora|"vlcEx800 [pan-1p::GFP::unc-54 3'UTR + rol-6(su1006)]. Not all transgenic animals roll well; pick GFP+ or Rollers to maintain. Reporter contains pan-1 enhancer sequence (-1050, -148) inserted into pDD95.75. Reference: Lloret-Fernndez et al. eLife 2018;7:e32785 DOI: 10.7554/eLife.32785."
Proper citation: RRID:WB-STRAIN:WBStrain00028723 Copy
http://www.wormbase.org/db/get?name=WBStrain00028724
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00020368(ast-1)
Genomic Alteration: WBGene00020368(ast-1)
Availability: available
References:
Synonyms: ast-1(vlc19[ast-1::GFP]) II.
Alternate IDs: WB-STRAIN:NFB1369, CGC_NFB1369
Notes: Made_by: Carla Lloret & Carlos Mora|"vlc19[ast-1::GFP] II. Superficially wild-type. Endogenous ast-1 locus tagged with GFP using Cas9-triggered homologous recombination. GFP was inserted at the C-terminus using a 9 amino acid flexible linker present in the plasmids (Dickinson et al., 2015). Reference: Lloret-Fernndez et al. eLife 2018;7:e32785 DOI: 10.7554/eLife.32785."
Proper citation: RRID:WB-STRAIN:WBStrain00028724 Copy
http://www.wormbase.org/db/get?name=WBStrain00028725
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001950(hlh-3)
Genomic Alteration: WBGene00001950(hlh-3)
Availability: available
References:
Synonyms: hlh-3(vlc28[hlh-3::mNeonGreen]) II.
Alternate IDs: WB-STRAIN:NFB1692, CGC_NFB1692
Notes: Made_by: Carla Lloret & Carlos Mora|"vlc28[hlh-3::mNeonGreen] II. Superficially wild-type. Endogenous hlh-3 locus tagged with mNeonGreen using Cas9-triggered homologous recombination. mNeonGreen was inserted at the C-terminus using a 9 amino acid flexible linker present in the plasmids (Dickinson et al., 2015). Reference: Lloret-Fernndez et al. eLife 2018;7:e32785 DOI: 10.7554/eLife.32785."
Proper citation: RRID:WB-STRAIN:WBStrain00028725 Copy
http://www.wormbase.org/db/get?name=WBStrain00028726
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: vlcEx1091.
Alternate IDs: WB-STRAIN:NFB1895, CGC_NFB1895
Notes: Made_by: Carla Lloret & Carlos Mora|"vlcEx1091 [snt-1p::GFP::unc-54 3'UTR + rol-6(su1006)]. Not all transgenic animals roll well; pick GFP+ or Rollers to maintain. Reporter contains snt-1 enhancer sequence (+993, +2170) inserted into pDD95.75. Reference: Lloret-Fernndez et al. eLife 2018;7:e32785 DOI: 10.7554/eLife.32785."
Proper citation: RRID:WB-STRAIN:WBStrain00028726 Copy
http://www.wormbase.org/db/get?name=WBStrain00028720
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: vlcEx683.
Alternate IDs: WB-STRAIN:NFB1181, CGC_NFB1181
Notes: Made_by: Carla Lloret & Carlos Mora|"vlcEx683 [mgl-2p::GFP::unc-54 3'UTR + rol-6(su1006)]. Not all transgenic animals roll well; pick GFP+ or Rollers to maintain. Reporter contains mgl-2 enhancer sequence (-4183, -3367) inserted into pDD95.75. Reference: Lloret-Fernndez et al. eLife 2018;7:e32785 DOI: 10.7554/eLife.32785."
Proper citation: RRID:WB-STRAIN:WBStrain00028720 Copy
http://www.wormbase.org/db/get?name=WBStrain00028717
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: vlcEx653.
Alternate IDs: WB-STRAIN:NFB1151, CGC_NFB1151
Notes: Made_by: Carla Lloret & Carlos Mora|"vlcEx653 [pde-3p::GFP::unc-54 3'UTR + rol-6(su1006)]. Not all transgenic animals roll well; pick GFP+ or Rollers to maintain. Reporter contains pde-3 enhancer sequence (-2539, -1599) inserted into pDD95.75. Reference: Lloret-Fernndez et al. eLife 2018;7:e32785 DOI: 10.7554/eLife.32785."
Proper citation: RRID:WB-STRAIN:WBStrain00028717 Copy
http://www.wormbase.org/db/get?name=WBStrain00028718
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: vlcEx666.
Alternate IDs: WB-STRAIN:NFB1164, CGC_NFB1164
Notes: Made_by: Carla Lloret & Carlos Mora|"vlcEx666 [klp-7p::GFP::unc-54 3'UTR + rol-6(su1006)]. Not all transgenic animals roll well; pick GFP+ or Rollers to maintain. Reporter contains klp-7 enhancer sequence (+1434, +2287) inserted into pDD95.75. Reference: Lloret-Fernndez et al. eLife 2018;7:e32785 DOI: 10.7554/eLife.32785."
Proper citation: RRID:WB-STRAIN:WBStrain00028718 Copy
http://www.wormbase.org/db/get?name=WBStrain00028710
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00022121(cogc-3)
Genomic Alteration: WBGene00022121(cogc-3)
Availability: available
References:
Synonyms: cogc-3(k181) I.
Alternate IDs: WB-STRAIN:NF1684, CGC_NF1684
Notes: Distal tip cell migration defective. Growth delay. Protruding vulva.
Proper citation: RRID:WB-STRAIN:WBStrain00028710 Copy
http://www.wormbase.org/db/get?name=WBStrain00028870
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
References:
Synonyms: unc-119(ed4) III; qyEx114.
Alternate IDs: WB-STRAIN:NK773, CGC_NK773
Notes: qyEx114 [C28C12.10::GFP + unc-119(+)]. Maintain by picking non-Unc.
Proper citation: RRID:WB-STRAIN:WBStrain00028870 Copy
http://www.wormbase.org/db/get?name=WBStrain00028871
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
References:
Synonyms: unc-119(ed4) III; qyEx116.
Alternate IDs: WB-STRAIN:NK774, CGC_NK774
Notes: qyEx116 [C14A11.3b::GFP + unc-119(+)]. Maintain by picking non-Unc.|"Supplementary_genotype qyEx116 [pcgef-1b::GFP + unc-119(+)]"
Proper citation: RRID:WB-STRAIN:WBStrain00028871 Copy
http://www.wormbase.org/db/get?name=WBStrain00028872
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
References:
Synonyms: unc-119(ed4) III; qyEx117.
Alternate IDs: WB-STRAIN:NK775, CGC_NK775
Notes: qyEx117 [C14A11.3a,c::GFP + unc-119(+)]. Maintain by picking non-Unc.|"Supplementary_genotype qyEx117 [pcgef-1a,c::GFP + unc-119(+)]"
Proper citation: RRID:WB-STRAIN:WBStrain00028872 Copy
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