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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Online Resource for Community Annotation of Eukaryotes Resource Report Resource Website 10+ mentions |
Online Resource for Community Annotation of Eukaryotes (RRID:SCR_014989) | OrcAE, ORCAE | narrative resource, data or information resource, wiki | Online genome annotation tool for validating and correcting gene annotations. OrcAE is community-driven and can be edited by account-holders in the research community. | genome annotation, gene validation, community driven, bio.tools |
is listed by: bio.tools is listed by: Debian has parent organization: Bioinformatics Gent has parent organization: Ghent University; Ghent; Belgium has parent organization: VIB; Flanders; Belgium |
PMID:23132114 | Free, Account required, The research community can contribute to this resource | biotools:orcae | https://bio.tools/orcae | SCR_014989 | Online Resource for Community Annotation of Eukaryotes (OrcAE) | 2026-08-01 12:05:20 | 16 | |||||
|
LTQ-Orbitrap Fusion Tribrid Mass Spectrometer Resource Report Resource Website 1+ mentions |
LTQ-Orbitrap Fusion Tribrid Mass Spectrometer (RRID:SCR_014992) | Mass spectrometer that combines quadrupole, ion trap, and Orbitrap mass analysis. | mass spectrometer, quadrupole, ion trap, orbitrap, thermofisher scientific, proteomic, compound | Available for purchase, Commercially available | SCR_014992 | Orbitrap Fusion Tribrid Mass Spectrometer | 2026-08-01 12:05:11 | 9 | |||||||||||
|
MedCalc Resource Report Resource Website 10000+ mentions |
MedCalc (RRID:SCR_015044) | data processing software, data analysis software, software application, software resource | Statistical software for ROC curve analysis. MedCalc performs several statistical tests such as method comparison, method evaluation, reference intervals, and meta-analysis. | statistic, statistical analysis, roc curve, reference software | is listed by: SoftCite | Commercially available, Available for purchase, Trial available | SCR_015044 | 2026-08-01 12:05:21 | 18070 | ||||||||||
|
Nikon: Eclipse FN1 Microscope Resource Report Resource Website 1+ mentions |
Nikon: Eclipse FN1 Microscope (RRID:SCR_014995) | instrument resource | Fixed-stage microscope for electrophysiological research. Features include open design, noise reduction, 16x objective lens, and water dipping objective with depth induced aberration correction. | microscope, electrophysiology, fixed-stage, nikon, hardware, instrument, equipment, USEDit | is listed by: USEDit | Commercially available, Available for purchase | https://drive.google.com/file/d/1doal81AS1pADxa06FHxhIM9lgZye2wvv/view?usp=drivesdk | https://downloads.microscope.healthcare.nikon.com/phase4/literature/Brochures/Fn1-2CE-MRQH-8.pdf | SCR_014995 | Eclipse FN1 | 2026-08-01 12:05:20 | 7 | |||||||
|
AddictionResources Resource Report Resource Website |
AddictionResources (RRID:SCR_015048) | group | Private organization that offers resources and serves as a community for those recovering from addiction and to help patients find the highest quality care for a successful recovery. | addiction recovery, addiction recovery resources, addiction recovery organization, drug addiction | SCR_015048 | 2026-08-01 12:05:11 | 0 | ||||||||||||
|
Agilent: 2200 TapeStation Instrument Resource Report Resource Website 10+ mentions |
Agilent: 2200 TapeStation Instrument (RRID:SCR_014994) | instrument resource | Hardware system which automates RNA, DNA, and protein sample QC, including sample loading, separation, and imaging. | rna, dna, protein sample qc, quality control, agilent, hardware, instrument, equipment, USEDit | https://drive.google.com/file/d/1E6jznqjHFiDbbTFiJ1ccNsZnhp_YzD5s/view?usp=drivesdk | https://www.agilent.com/cs/library/usermanuals/public/G2964-90000_TapeStation_USR_ENU.pdf | http://www.genomics.agilent.com/en/TapeStation-System/2200-TapeStation-Instrument/?cid=AG-PT-181&tabId=AG-PR-1004 | SCR_014994 | Agilent 2200 TapeStation, Agilent 2200 TapeStation system | 2026-08-01 12:05:20 | 17 | ||||||||
|
Agilent Masshunter Quantitative Analysis software Resource Report Resource Website 100+ mentions |
Agilent Masshunter Quantitative Analysis software (RRID:SCR_015040) | data processing software, data analysis software, software application, software resource | This resource is not available. Documented on October 6, 2020.Software for the analysis of mass spectrometry data. MassHunter also works with software-specific packages to do more specialized analysis tasks. | mass spectrometry, expression profiling, ms data analysis, commercial product |
is related to: Agilent ChemStation Software is related to: Agilent MassHunter WorkStation - Qualitative Analysis for GC/MS has parent organization: Agilent Technologies |
SCR_015040 | MassHunter Software, MassHunter | 2026-08-01 12:05:12 | 172 | ||||||||||
|
HCImage Resource Report Resource Website 100+ mentions |
HCImage (RRID:SCR_015041) | image analysis software, data acquisition software, software application, software resource, data processing software, image acquisition software | Image acquisition and analysis software suite for Hamamatsu imaging devices. Hamamatsu Photonics imaging system for microscopy. | Hamamatsu Photonics, image analysis system, image acquisition system, microscopy | Restricted | SCR_018818 | SCR_015041 | HCImage Image Acquisition and Analysis Software | 2026-08-01 12:05:11 | 233 | |||||||||
|
CACTVS System Resource Report Resource Website |
CACTVS System (RRID:SCR_014919) | data processing software, data analysis software, software application, software resource | Computational chemistry related-software used for the computation management, analysis and visualisation of chemical information of any defined type. This software uses a worldwide network of databases with property descriptions, computational modules, data analysis tools, visualization servers, data type handlers and I/O modules to increase the software�s capacity extensibility. | chemistry, computation, management, analysis, visualisation, computational module, data analysis, visualization, data type, software | SCR_014919 | 2026-08-01 12:05:19 | 0 | ||||||||||||
|
Economic Commission for Latin America and the Caribbean Resource Report Resource Website 1+ mentions |
Economic Commission for Latin America and the Caribbean (RRID:SCR_014998) | ECLAC, CEPAL | Regional commission of the United Nations with the purpose of contributing to the economic development of Latin America, coordinating actions directed towards this end, reinforcing economic ties among countries and with other nations, and promoting social development. | economic development, social development, regional information, information system |
is parent organization of: CEPALSTAT hosts: CEPALSTAT |
United Nations | SCR_014998 | Comision Economica para America Latina y el Caribe, Economic Commission for Latin America and the Caribbean (ECLAC) | 2026-08-01 12:05:11 | 2 | |||||||||
|
METAPC Resource Report Resource Website 1+ mentions |
METAPC (RRID:SCR_014916) | software resource | Software program to predict metabolic and degradation products of chemicals. METAPC has dictionaries on mammalian metabolism, aerobic microbial degredation, anerobic microbial degredation, and photo degredation. | metabolic, mammalian metabolism, aerobic microbial degredation, anerobic microbial degredation, photo degredation | Commercial | SCR_014916 | 2026-08-01 12:05:19 | 1 | |||||||||||
|
bcl2fastq Resource Report Resource Website 1000+ mentions |
bcl2fastq (RRID:SCR_015058) | software processing resource | Conversion software developed by Illumina that both demultiplexes data and converts BCL files generated by Illumina sequencing systems to standard FASTQ file formats for downstream analysis. | bcl file, illumina, sequencing, fastq, conversion software | Restricted | http://emea.support.illumina.com/downloads/bcl2fastq-conversion-software-v2-20.html | SCR_015058 | bcl2fastq2, bcl2fastq2 Conversion Software v2.20 | 2026-08-01 12:05:11 | 3756 | |||||||||
|
SeaView Resource Report Resource Website 1000+ mentions |
SeaView (RRID:SCR_015059) | data visualization software, data analysis software, software application, software resource, sequence analysis software, data processing software | Graphical user interface for multiple sequence alignment and molecular phylogeny. SeaView also generates phylogenetic trees. | sequence alignment, molecular phylogeny, phylogenetic tree, bio.tools |
is listed by: Debian is listed by: bio.tools is listed by: OMICtools |
PMID:19854763 DOI:10.1093/molbev/msp259 |
Free, Available for download | OMICS_08908, biotools:seaview | https://bio.tools/seaview, https://sources.debian.org/src/seaview/ | SCR_015059 | 2026-08-01 12:05:21 | 1777 | |||||||
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UNSILO Resource Report Resource Website |
UNSILO (RRID:SCR_015019) | software resource, web application | Text mining tool for publishers and researchers. UNSILO modules possess functions such as searching, recommending articles with similar topics, mapping article relationships, and providing insights into article trends and metrics. | text mining, intelligent semantic algorithms, auto curation, keyword generator | Danish Innovation Act ; Scale Capital ; Infosys |
Available to the scientific community | SCR_015019 | 2026-08-01 12:05:12 | 0 | ||||||||||
|
DataAssist Resource Report Resource Website 100+ mentions |
DataAssist (RRID:SCR_014969) | data visualization software, data analysis software, software application, software resource, data processing software | Data analysis tool that utilizes the Comparative CT (ddCT) method to rapidly and accurately quantitate relative gene expression across a large number of genes and samples. Raw input from plates or arrays can be analyzed according to user-determined settings. | ddCT, QC analysis, comparative ct, gene expression, data analysis, gene, plot | has parent organization: Thermo Fisher Scientific | Free, Available for download, Account required | SCR_014969 | DataAssist Software | 2026-08-01 12:05:10 | 454 | |||||||||
|
NIH Brics Resource Report Resource Website |
NIH Brics (RRID:SCR_015028) | BRICS | software resource, web application | Modular, web-based bioinformatics system for research studies and clinical trials data collection. Tools include a data dictionary, data repository, meta study, global unique identifiers for studies, protocol management and data capture, and query and exportation of data. | bioinformatics platform, data collection, bioinformatics tool | Available to the scientific community | SCR_015028 | Biomedical Research Informatics Computing System (BRICS), Biomedical Research Informatics Computing System | 2026-08-01 12:05:12 | 0 | |||||||||
|
International Image Interoperability Framework Resource Report Resource Website |
International Image Interoperability Framework (RRID:SCR_015029) | IIIF | software resource, software application, systems interoperability software, collaboration tool | Set of shared application programming interface specifications for interoperable functionality in digital image repositories. It utilizes JSON-LD, linked data, and standard W3C web protocols to parse and share digital image data, migrate across technology systems, and provide enhanced image access. | interoperability, framework, consortium, image delivery, image sharing, image community | Available to the scientific community | SCR_015029 | International Image Interoperability Framework (IIIF) | 2026-08-01 12:05:21 | 0 | |||||||||
|
GapCloser Resource Report Resource Website 500+ mentions |
GapCloser (RRID:SCR_015026) | data analysis software, source code, software application, software resource, sequence analysis software, data processing software | Module of SOAPdenovo2 commonly used independently to close gaps in genome assemblies. | gap closure, genome assembly, sequence | is listed by: SOAP | PMID:23587118 | Free, Available for download | SCR_015026 | 2026-08-01 12:05:21 | 696 | |||||||||
|
Group Sparse Canonical Correlation Analysis Resource Report Resource Website |
Group Sparse Canonical Correlation Analysis (RRID:SCR_014977) | GSCCA | data processing software, data analysis software, software application, software resource | Group Sparse Canonical Correlation Analysis is a method designed to study the mutual relationship between two different types of data. | group analysis, correlation analysis | has parent organization: NeuroImaging Tools and Resources Collaboratory (NITRC) | NSF ; NIH |
Available for download | SCR_014977 | 2026-08-01 12:05:11 | 0 | ||||||||
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Drososhare Resource Report Resource Website 1+ mentions |
Drososhare (RRID:SCR_014976) | biomaterial supply resource, organism supplier, material resource | Website resource for researchers to order and send Drosophilia specimens to each other. This community-driven supplier also works with the FlyBase Drosophilia database to search for synonyms for fly species. | community driven, organism supplier, community building portal, drosophila, fly, specimen | uses: FlyBase | Available to the research community | SCR_014976 | Drososhare GmbH | 2026-08-01 12:05:19 | 1 |
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