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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Atlas of Living Australia Resource Report Resource Website 100+ mentions |
Atlas of Living Australia (RRID:SCR_006467) | ALA | data or information resource, database | Online repository of information about Australian plants, animals, and fungi. Development started in 2006. The Commonwealth Scientific and Industrial Research Organisation is organisation significantly involved in development of ALA. | data sharing, biodiversity, image, photograph, dna, conservation, natural resource, literature, nomenclature, australia, morphology, life stage, stage, behavior, reproduction, habitat, genetic, region, species, portal, data set, data analysis service, metadata standard, web service, image collection, FASEB list |
is listed by: re3data.org is listed by: DataCite is listed by: FAIRsharing has parent organization: CSIRO has parent organization: GBIF - Global Biodiversity Information Facility |
Creative Commons Attribution License, v3 Australia License, Provider content may be covered by other Terms of Use, Http://www.ala.org.au/about-the-atlas/terms-of-use/ | nlx_152016, DOI:10.26197, DOI:10.25504/FAIRsharing.2f66da, r3d100010918, DOI:10.17616/R3VG9S | https://doi.org/10.26197, https://dx.doi.org/10.26197, http://doi.org/10.17616/R3VG9S, https://fairsharing.org/10.25504/FAIRsharing.2f66da, https://doi.org/10.17616/R3VG9S | SCR_006467 | 2026-07-28 09:41:34 | 147 | |||||||
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Mouse Genome Informatics (MGI) Resource Report Resource Website 1000+ mentions |
Mouse Genome Informatics (MGI) (RRID:SCR_006460) | MGI | data or information resource, database | International database for laboratory mouse. Data offered by The Jackson Laboratory includes information on integrated genetic, genomic, and biological data. MGI creates and maintains integrated representation of mouse genetic, genomic, expression, and phenotype data and develops reference data set and consensus data views, synthesizes comparative genomic data between mouse and other mammals, maintains set of links and collaborations with other bioinformatics resources, develops and supports analysis and data submission tools, and provides technical support for database users. Projects contributing to this resource are: Mouse Genome Database (MGD) Project, Gene Expression Database (GXD) Project, Mouse Tumor Biology (MTB) Database Project, Gene Ontology (GO) Project at MGI, and MouseCyc Project at MGI. | RIN, Resource Information Network, molecular neuroanatomy resource, human health, human disease, animal model, gene expression, phenotype, genotype, gene, pathway, orthology, tumor, strain, single nucleotide polymorphism, recombinase, function, blast, image, pathology, model, data analysis service, genome, genetics, gold standard, RRID Community Authority |
uses: InterMOD is used by: NIF Data Federation is used by: Resource Identification Portal is used by: PhenoGO is used by: Integrated Animals is used by: Cytokine Registry is used by: NIH Heal Project is recommended by: Resource Identification Portal is recommended by: NIDDK Information Network (dkNET) is recommended by: National Library of Medicine is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases is listed by: 3DVC is listed by: re3data.org is listed by: OMICtools is listed by: NIH Data Sharing Repositories is listed by: InterMOD is listed by: Resource Information Network is affiliated with: InterMOD is related to: MONARCH Initiative is related to: MouseCyc is related to: AmiGO is related to: Gene Expression Database is related to: Bgee: dataBase for Gene Expression Evolution is related to: HomoloGene is related to: Rat Gene Symbol Tracker is related to: Enhancer Trap Line Browser is related to: Integrated Brain Gene Expression is related to: MalaCards is related to: Gene Ontology is related to: BioMart Project is related to: NIH Data Sharing Repositories is related to: RIKEN integrated database of mammals is related to: JAX Neuroscience Mutagenesis Facility is related to: PhenoGO is related to: International Mouse Strain Resource is related to: Mouse Genome Database is related to: Mouse Tumor Biology Database has parent organization: Jackson Laboratory is parent organization of: Anatomy of the Laboratory Mouse is parent organization of: Mouse Genome Informatics Transgenes is parent organization of: Federation of International Mouse Resources is parent organization of: MGI GO Browser is parent organization of: Recombinase (cre) Activity is parent organization of: Mouse Genome Informatics: The Mouse Gene Expression Information Resource Project is parent organization of: Deltagen and Lexicon Knockout Mice and Phenotypic Data Resource is parent organization of: MGI strains is parent organization of: MPO is parent organization of: Phenotypes and Mutant Alleles is parent organization of: Human Mouse Disease Connection is parent organization of: Functional Annotation is parent organization of: Strains, SNPs and Polymorphisms is parent organization of: Vertebrate Homology is parent organization of: Batch Data and Analysis Tool is parent organization of: Nomenclature |
NHGRI HG000330; NHGRI HG002273; NICHD HD033745; NCI CA089713 |
PMID:19274630 PMID:18428715 |
Free, Freely available | nif-0000-00096, OMICS_01656, r3d100010266 | http://www.informatics.jax.org/batch, http://www.informatics.jax.org/submit.shtml, http://www.informatics.jax.org/expression.shtml, https://doi.org/10.17616/R35P54 | SCR_006460 | , MGI, Mouse Genome Informatics | 2026-07-28 09:41:36 | 1119 | ||||
|
NCBI Epigenomics Resource Report Resource Website 10000+ mentions |
NCBI Epigenomics (RRID:SCR_006151) | Epigenomics | data or information resource, database | THIS RESOURCE IS NO LONGER IN SERVICE, documented on January 19, 2022. | genome-wide map, dna, histone, modification, epigenomic, genome, gold standard, gene mapping, gene amplification, genetic code, gene library, dna fingerprinting, chromatin, histone modification, dna methylation, dnaase footprinting, genome wide association study, gene expression |
is listed by: re3data.org is listed by: OMICtools is related to: Roadmap Epigenomics Project has parent organization: NCBI |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_151643, OMICS_01848, r3d100010782 | https://doi.org/10.17616/R34K7J | http://www.ncbi.nlm.nih.gov/epigenomics | SCR_006151 | NCBI Epigenomic Gateway, National Center for Biotechnology Information Epigenomics, NCBI Epigenomic Hub | 2026-07-28 09:41:31 | 11568 | |||||
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UniSTS Resource Report Resource Website 10+ mentions |
UniSTS (RRID:SCR_006843) | UniSTS | data or information resource, database | THIS RESOURCE IS NO LONGER IN SERVICE, documented August 22, 2016. Database of sequence tagged sites (STSs) derived from STS-based maps and other experiments. STSs are defined by PCR primer pairs and are associated with additional information such as genomic position, genes, and sequences. Chromosome maps are labeled by name of the originating organism, the map title, total markers, total UniSTSs and links to view maps as well as research documents available through PubMed, another NCBI database. The search functions within UniSTS allow the user to search by gene marker, chromosome, gene symbol and gene description terms to locate markers on specified genes. A representation of the UniSTS datasets is available by ftp. NOTE: All data from this resource have been moved to the Probe database, http://www.ncbi.nlm.nih.gov/probe. You can retrieve all UniSTS records by searching the probe database using the search term unists(properties). (use brackets insead of parenthesis). Additionally, legacy data remain on the NCBI FTP Site in the UniSTS Repository (ftp://ftp.ncbi.nih.gov/pub/ProbeDB/legacy_unists). | marker, primer sequence, mapping, sequence tagged site, genomic position, gene, sequence, nucleotide, nucleotide sequence, chromosome, gold standard |
is listed by: re3data.org is related to: NCBI Probe has parent organization: NCBI |
THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-03614 | SCR_006843 | UniSTS: Integrating Markers and Maps, NCBI UniSTS, Entrez UniSTS | 2026-07-28 09:41:40 | 40 | |||||||
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4TU.ResearchData Resource Report Resource Website |
4TU.ResearchData (RRID:SCR_023125) | data repository, service resource, storage service resource | International data repository for science, engineering and design. Services include curation, sharing, long-term access and preservation of research datasets. These services are available to anyone around the world. In addition, 4TU.ResearchData also offers training and resources to researchers to support them in making research data findable, accessible, interoperable and reproducible (FAIR). | International data repository, science data, engineering data, design data, |
is listed by: DataCite is listed by: FAIRsharing is listed by: re3data.org |
Free, Freely available | DOI:10.4121, DOI:10.17616/R3VG6N, DOI:10.25504/FAIRsharing.zcveaz | https://doi.org/10.4121, https://dx.doi.org/10.4121, http://doi.org/10.17616/R3VG6N, https://fairsharing.org/10.25504/FAIRsharing.zcveaz | SCR_023125 | 4TU.ResearchData | 2026-07-28 09:45:53 | 0 | |||||||
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Arch Resource Report Resource Website 1+ mentions |
Arch (RRID:SCR_023130) | data repository, service resource, storage service resource | Arch is an open access repository for the research and scholarly output of Northwestern University. Log in with your NetID to deposit, describe, and organize your research for public access and long-term preservation. We'll use our expertise to help you curate, share, and preserve your work. | Northwestern University research and scholarly output, Northwestern University data |
is listed by: DataCite is listed by: re3data.org is listed by: FAIRsharing |
Free, Freely available | DOI:10.17616/R31NJMGT, DOI:10.25504/FAIRsharing.52b22c, r3d100012925, DOI:10.21985 | https://doi.org/10.21985, https://dx.doi.org/10.21985, http://doi.org/10.17616/R31NJMGT, https://fairsharing.org/10.25504/FAIRsharing.52b22c, https://doi.org/10.17616/R31NJMGT | SCR_023130 | Arch | 2026-07-28 09:45:48 | 2 | |||||||
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Australian Ocean Data Network Resource Report Resource Website 10+ mentions |
Australian Ocean Data Network (RRID:SCR_023134) | data repository, service resource, storage service resource | Interoperable online network of marine and climate data resources.AODN Portal provides access to all available Australian marine and climate science data and provides the primary access to IMOS data. |
is listed by: DataCite is listed by: re3data.org is listed by: FAIRsharing |
Free, Freely available | DOI:10.26198, r3d100011749, DOI:10.17616/R3CG82, r3d100010914, DOI:10.25504/FAIRsharing.j5eden | https://doi.org/10.26198, https://dx.doi.org/10.26198, http://doi.org/10.17616/R3CG82, https://fairsharing.org/10.25504/FAIRsharing.j5eden, https://doi.org/10.17616/R3CG82, https://doi.org/10.17616/R35057 | SCR_023134 | Australian Ocean Data Network | 2026-07-28 09:45:53 | 13 | ||||||||
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Aston Data Explorer Resource Report Resource Website 100+ mentions |
Aston Data Explorer (RRID:SCR_023132) | data repository, service resource, storage service resource | Aston University's repository for their research data. It is one of three services providing information about Aston University�s research. Aston Publications Explorer holds Aston's research publications and Aston Research Explorer has broader information about Aston's research work including research staff, awards and activities, projects and research groups.Metadata will be accessible to anyone free of charge. The metadata may be re-used in any medium without prior permission and re-sold commercially provided the repository is mentioned.Aston�s repository holds datasets and corresponding metadata that have been produced by Aston University staff and students. The datasets deposited in Aston Publications Explorer range from metadata records only through to full datasets. Content is the sole responsibility of the authors, and any questions over content should be directed to them.Aston Data Explorer, Aston Publications Explorer AND Aston Research Explorer allow users to re-use full-text and other full-data items under the terms of the Creative Commons Attribution Non-Commercial No Derivatives (CC BY NC ND) licence. This means that users must give appropriate credit to the authors and link to the licence. Users may not re-use the material for commercial purposes. Users cannot distribute material that has been remixed, transformed or built upon the original published output. Where a full-text or other full-data item has a licence that is more restrictive or permissive than the CC BY NC ND default licence, this licence should be adhered to. |
is listed by: DataCite is listed by: re3data.org |
Free, Freely available | r3d100012285, DOI:10.17616/R3H073, DOI:10.17036 | https://doi.org/10.17036, https://dx.doi.org/10.17036, http://doi.org/10.17616/R3H073, https://doi.org/10.17616/R3H073 | SCR_023132 | Aston Data Explorer | 2026-07-28 09:45:51 | 145 | ||||||||
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Bolin Centre Database Resource Report Resource Website 1+ mentions |
Bolin Centre Database (RRID:SCR_023142) | data repository, service resource, storage service resource | Provides open access to Climate and Earth System Data from scientists at the centre and their collaborators. Helps to make your data open, FAIR and visually appealing. Each dataset and source code in the Bolin Centre Database is assigned a unique DOI. This makes it easy to cite and find your data. If dataset has more than one version, each version will have its own DOI. |
is listed by: DataCite is listed by: re3data.org is listed by: FAIRsharing |
Free, Freely available | DOI:10.17616/R3PP99, DOI:10.17043, DOI:10.25504/FAIRsharing.3356e8, r3d100011699 | https://doi.org/10.17043, https://dx.doi.org/10.17043, http://doi.org/10.17616/R3PP99, https://fairsharing.org/10.25504/FAIRsharing.3356e8, https://doi.org/10.17616/R3PP99 | SCR_023142 | Bolin Centre Database | 2026-07-28 09:45:48 | 1 | ||||||||
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Birkbeck Research Data Resource Report Resource Website |
Birkbeck Research Data (RRID:SCR_023139) | data repository, service resource, storage service resource | Repository allows all researchers at Birkbeck to upload data, and get DOI.Data in the Birkbeck Data Repository is stored on Arkivum server.This is a very secure storage space, which will allow our data to remain unchanged and accessible for many years after it is deposited. |
is listed by: DataCite is listed by: re3data.org |
Free, Freely available | r3d100012185, DOI:10.18743, DOI:10.17616/R31NJLW9 | https://doi.org/10.18743, https://dx.doi.org/10.18743, http://doi.org/10.17616/R31NJLW9, https://doi.org/10.17616/R31NJLW9 | SCR_023139 | Birkbeck Research Data | 2026-07-28 09:45:48 | 0 | ||||||||
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Barbara A. Mikulski Archive for Space Telescopes Resource Report Resource Website 10+ mentions |
Barbara A. Mikulski Archive for Space Telescopes (RRID:SCR_023137) | data repository, service resource, storage service resource | Astronomical data archive focused on optical, ultraviolet, and near infrared. Used for maximizing scientific accessibility and productivity of astronomical data. MAST hosts data from over dozen missions like Webb, Hubble, TESS, Kepler, and in the future Roman. |
is listed by: DataCite is listed by: re3data.org |
Free, Freely available | DOI:10.17909, DOI:10.17616/R3K897, r3d100010403 | https://doi.org/10.17909, https://dx.doi.org/10.17909, http://doi.org/10.17616/R3K897, https://doi.org/10.17616/R3K897 | SCR_023137 | Barbara A. Mikulski Archive for Space Telescopes | 2026-07-28 09:45:53 | 13 | ||||||||
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DOE Joint Genome Institute Resource Report Resource Website 500+ mentions |
DOE Joint Genome Institute (RRID:SCR_003045) | DOE JGI, JGI, | data or information resource, organization portal, portal | Institute to advance genomics in support of the DOE missions related to clean energy generation and environmental characterization and cleanup. Supported by the DOE Office of Science, the DOE JGI unites the expertise at Lawrence Berkeley National Laboratory, Lawrence Livermore National Laboratory, and the HudsonAlpha Institute for Biotechnology. The facility provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these challenges. | genomics, sequencing, computational analysis, clean energy, environment, biotechnology, nucleotide sequence, protein, genome, bacteria, microorganism, fungal colony, fungal community, dna, phenotype, molecular biology, life science, genomics, genetics, nature, nurture, ecology, bioenergetics, high-throughput sequencing |
is listed by: re3data.org has parent organization: University of California; California; USA is parent organization of: Microbial Genetics Resource at JGI is parent organization of: JGI Genome Portal is parent organization of: Genomes Online Database is parent organization of: IMG System is parent organization of: Classifier for Metagenomic Sequences is parent organization of: MycoCosm is parent organization of: Plant Genome Resource at JGI is parent organization of: Classifier for Metagenomic Sequences is parent organization of: Phytozome is parent organization of: IMG is parent organization of: Metagenomics Program at JGI is parent organization of: Assembly Likelihood Estimator is parent organization of: 1000 Fungal Genome Project is parent organization of: Bestus Bioinformaticus Tools is parent organization of: Bestus Bioinformaticus Duk is parent organization of: Bestus Bioinformaticus Merge is parent organization of: Reformat |
DOE | Free, Freely available | nif-0000-30425 | SCR_003045 | DOE Joint Genome Institute - Enabling Advances in Bioenergy & Environmental Research, Department of Energy Joint Genome Institute, Joint Genome Institute | 2026-07-28 09:40:36 | 689 | ||||||
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Academic Seismic Portal at UTIG Resource Report Resource Website |
Academic Seismic Portal at UTIG (RRID:SCR_000403) | ASP at UTIG, ASP_UTIG | data or information resource, database | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 1, 2023. Database of processed seismic reflection / refraction data providing access to metadata, SEG-Y files, navigation files, seismic profile images, processing histories and more. The main features of the web site include a geographic search engine using Google Plugins, a metadata search engine, and metadata pages for the various seismic programs. Metadata are uploaded into mySQL, a public-domain SQL server, and then PHP scripts query the metadata and directories, creating web pages, displaying images, and providing ftp links. | seismic, metadata, image, reflection, refraction, marine geology, geophysics |
is listed by: re3data.org is listed by: CINERGI is related to: Academic Seismic Portal at LDEO has parent organization: University of Texas at Austin; Texas; USA |
NSF | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_154745, r3d100010631 | https://doi.org/10.17616/R3CP6C | SCR_000403 | Academic Seismic Portal (ASP) at UTIG | 2026-07-28 09:40:00 | 0 | |||||
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Lamont-Doherty Core Repository Resource Report Resource Website |
Lamont-Doherty Core Repository (RRID:SCR_002216) | LDEO-DSSR, LDCR | access service resource, service resource, core facility | Core repository and one of the world's most unique and important collections of scientific samples from the deep sea. Sediment cores from every major ocean and sea are archived at the Core Repository. The collection contains approximately 72,000 meters of core composed of 9,700 piston cores; 7,000 trigger weight cores; and 2,000 other cores such as box, kasten, and large diameter gravity cores. They also hold 4,000 dredge and grab samples, including a large collection of manganese nodules, many of which were recovered by submersibles. Over 100,000 residues are stored and are available for sampling where core material is expended. In addition to physical samples, a database of the Lamont core collection has been maintained for nearly 50 years and contains information on the geographic location of each collection site, core length, mineralogy and paleontology, lithology, and structure, and more recently, the full text of megascopic descriptions. Samples from cores and dredges, as well as descriptions of cores and dredges (including digital images and other cruise information), are provided to scientific investigators upon request. Materials for educational purposes and museum displays may also be made available in limited quantities when requests are adequately justified. Various services and data analyses, including core archiving, carbonate analyses, grain size analyses, and RGB line scan imaging, GRAPE, P-wave velocity and magnetic susceptibility runs, can also be provided at cost. The Repository operates a number of labs and instruments dedicated to making fundamental measurements on material entering the repository including several non-destructive methods. Instruments for conducting and/or assisting with analyses of deep-sea sediments include a GeoTek Multi-Sensor Core Logger, a UIC coulometer, a Micromeritics sedigraph, Vane Shear, X-radiograph, Sonic Sifter, freeze dryer, as well as a variety of microscopes, sieves, and sampling tools. They also make these instruments available to the scientific community for conducting analyses of deep-sea sediments. If you are interested in borrowing any field equipment, please contact the Repository Curator. | deep sea, sediment, ocean, sea, geoscience, metadata |
is listed by: CINERGI is listed by: DataCite is listed by: re3data.org has parent organization: Columbia University; New York; USA |
NSF ; Lamont -Doherty Earth Observatory |
Free, Freely available | DOI:10.26022, DOI:10.17616/R3PV10, nlx_154738 | https://doi.org/10.17616/R3PV10, https://doi.org/10.17616/r3pv10, https://doi.org/10.26022/, https://dx.doi.org/10.26022/ | SCR_002216 | LDEO-Deep Sea Sample Repository, LDEO Core Repository, Lamont -Doherty Earth Observatory | 2026-07-28 09:40:22 | 0 | |||||
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Code Ocean Resource Report Resource Website 10+ mentions |
Code Ocean (RRID:SCR_015532) | software resource | Cloud-based executable research platform for discovering and running scientific code. Code Ocean is designed to give researchers and developers a way to share, discover and run code published in academic journals and conferences. Users can upload code and data in various programming languages and link working code in a computational environment with the associated article, with Code Ocean assigning a Digital Object Identifier (DOI) to the algorithm. | cloud based platform, cloud platform, source code repository, scientific code repository |
is listed by: DataCite is listed by: re3data.org is listed by: FAIRsharing |
Open source, Code is available for download | DOI:10.24433, DOI:10.17616/R38F5N, DOI:10.25504/FAIRsharing.thskvr | https://doi.org/10.17616/R38F5N, https://doi.org/10.24433/, https://dx.doi.org/10.24433/, https://fairsharing.org/10.25504/FAIRsharing.thskvr | SCR_015532 | Code Ocean Inc | 2026-07-25 12:08:12 | 47 | |||||||
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U.S. Census Bureau Resource Report Resource Website 500+ mentions |
U.S. Census Bureau (RRID:SCR_011587) | Census Bureau | institution | Government agency responsible for the United States Census that also gathers other national demographic and economic data. As a part of the United States Department of Commerce, it serves as a leading source of data about America''''s people and economy. Its most visible role is to perform the official decennial (every 10 years) count of people living in the U.S. The most important result is the reallocation of the number of seats each state is allowed in the House of Representatives, but the results also affect a range of government programs received by each state. The agency director is a political appointee selected by the President of the United States. |
is related to: re3data.org is related to: 2023 U.S. Census Quick Facts about Alabama, Maryland, Missouri and Connecticut has parent organization: U.S. Department of Commerce is parent organization of: Longitudinal Employer-Household Dynamics is parent organization of: American FactFinder is parent organization of: TheDataWeb and DataFerrett is parent organization of: National Longitudinal Mortality Study is parent organization of: Public Use Microdata Sample for the Older Population is parent organization of: International Data Base is parent organization of: Pittsburgh Federal Statistical Research Data Center |
grid.432923.d, nlx_151862, ISNI: 0000 0001 1330 7149, Wikidata: Q637413, Crossref funder ID: 100006958 | https://ror.org/01qn7cs15 | SCR_011587 | Bureau of the Census, United States Census Bureau, US Census Bureau | 2026-07-25 12:07:17 | 591 | ||||||||
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Wellcome Trust Sanger Institute; Hinxton; United Kingdom Resource Report Resource Website 500+ mentions |
Wellcome Trust Sanger Institute; Hinxton; United Kingdom (RRID:SCR_011784) | WTSI, Sanger | institution | Non profit research organization for genome sequences to advance understanding of biology of humans and pathogens in order to improve human health globally. Provides data which can be translated for diagnostics, treatments or therapies including over 100 finished genomes, which can be downloaded. Data are publicly available on limited basis, and provided more extensively upon request. | research, genome, sequence, human, health, project, global, data, treatment, therapy |
is listed by: re3data.org is affiliated with: Open Targets is related to: Clonalframe is related to: ClonalOrigin is related to: TraCeR is parent organization of: ILLUMINUS is parent organization of: ARNIE is parent organization of: Sequence Search and Alignment by Hashing Algorithm is parent organization of: Sequencing of Idd regions in the NOD mouse genome is parent organization of: CAROL is parent organization of: DINDEL is parent organization of: Wellcome Trust Case Control Consortium is parent organization of: OLORIN is parent organization of: Exomiser is parent organization of: COSMIC - Catalogue Of Somatic Mutations In Cancer is parent organization of: GeneDB is parent organization of: Breast Cancer Somatic Genetics Study is parent organization of: Artemis: Genome Browser and Annotation Tool is parent organization of: ACT: Artemis Comparison Tool is parent organization of: Alien hunter is parent organization of: Pfam is parent organization of: DNAPlotter is parent organization of: VAGrENT is parent organization of: SMALT is parent organization of: LookSeq is parent organization of: ZMP is parent organization of: Deciphering Developmental Disorders is parent organization of: Sanger Mouse Resources Portal is parent organization of: SpliceDB is parent organization of: DECIPHER is parent organization of: 1000 Genomes: A Deep Catalog of Human Genetic Variation is parent organization of: Genes to Cognition: Neuroscience Research Programme is parent organization of: MEROPS is parent organization of: Rfam is parent organization of: VEGA is parent organization of: Bacterial Genomes is parent organization of: Caenorhabditis Genome Sequencing Projects is parent organization of: D. rerio Blast Server is parent organization of: Fungi Sequencing Projects is parent organization of: PEER is parent organization of: Alfresco - FRont-End for Sequence COmparison is parent organization of: AutoCSA (Automatic Comparative Sequence Analysis) is parent organization of: AceDB is parent organization of: CnD is parent organization of: Genomics of Drug Sensitivity in Cancer is parent organization of: Zebrafish Genome Project is parent organization of: Tree families database is parent organization of: Ensembl is parent organization of: BamView is parent organization of: SVMerge is parent organization of: RetroSeq is parent organization of: Consensus CDS is parent organization of: WormBase is parent organization of: Belvu is parent organization of: Bio-tradis is parent organization of: Blixem is parent organization of: Dotter is parent organization of: Exonerate is parent organization of: Fastaq is parent organization of: Gubbins is parent organization of: CellPhoneDB is parent organization of: Ensembl Metazoa is parent organization of: Scmap is parent organization of: Scfind is parent organization of: Recognition of Errors in Assemblies using Paired Reads is parent organization of: SAMTOOLS is parent organization of: Cell Model Passports |
Wellcome Trust | ISNI: 0000 0004 0606 5382, nlx_91258, grid.10306.34, Wikidata: Q1142544 | https://ror.org/05cy4wa09 | SCR_011784 | Wellcome Trust Sanger Institute, Genome Research Limited, The Wellcome Sanger Institute, Sanger Institute, Wellcome Trust Sanger Institute Genome Research Limited | 2026-07-25 12:07:22 | 527 | ||||||
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The Human Protein Atlas Resource Report Resource Website 5000+ mentions |
The Human Protein Atlas (RRID:SCR_006710) | HPA | knowledge base, data or information resource | Open access resource for human proteins. Used to search for specific genes or proteins or explore different resources, each focusing on particular aspect of the genome-wide analysis of the human proteins: Tissue, Brain, Single Cell, Subcellular, Cancer, Blood, Cell line, Structure and Interaction. Swedish-based program to map all human proteins in cells, tissues, and organs using integration of various omics technologies, including antibody-based imaging, mass spectrometry-based proteomics, transcriptomics, and systems biology. All the data in the knowledge resource is open access to allow scientists both in academia and industry to freely access the data for exploration of the human proteome. | human proteins, human proteome exploration, genome-wide analysis of human proteins, Tissue, Brain, Single Cell, Subcellular, Cancer, Blood, Cell line, Structure and Interaction, bio.tools, FASEB list |
is used by: MitoMiner is listed by: re3data.org is listed by: bio.tools is listed by: Debian is related to: aGEM has parent organization: HUPO Antibody Initiative |
Cancer, Tumor, Breast cancer, Colorectal cancer, Lung cancer, Prostate cancer, Normal | Knut and Alice Wallenberg Foundation | PMID:21139605 PMID:16127175 PMID:18669619 PMID:18853439 |
Public, Free, For informational purposes, Non-commercial, Acknowledgement required | nif-0000-00204, biotools:proteinatlas | https://bio.tools/proteinatlas | SCR_006710 | HPA antibody, Human Protein Atlas | 2026-07-25 12:06:25 | 7492 | |||
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Agency for Healthcare Research and Quality Resource Report Resource Website 1+ mentions |
Agency for Healthcare Research and Quality (RRID:SCR_003604) | AHRQ | institution | Agency that produces evidence to make health care safer, higher quality, more accessible, equitable, and affordable. Funding opportunities, grants, and a large collection of longitudinal hospital care data in the United States including the Systematic Review Data Repository and data sources on healthcare cost, quality, and accessibility, emergency room visits, hospitalization, and medical insurance are available. It works within the U.S. Department of Health and Human Services and with other partners to make sure that the evidence is understood and used. | medical policy, health care reform, health insurance, human anatomy, health, longitudinal, hospital, health policy, health insurance, health service, inpatient, emergency department, ambulatory surgery |
is listed by: re3data.org has parent organization: U.S. Department of Health and Human Services is parent organization of: Kidney Health Initiative |
ISNI: 0000 0004 0507 6696, nlx_157753, Wikidata: Q4692008, grid.413404.6, Crossref funder ID: 100000133 | https://ror.org/03jmfdf59 | SCR_003604 | Agency for Healthcare Research and Quality (AHRQ) | 2026-07-25 12:05:41 | 6 | |||||||
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Karlsruhe Institute of Technology; Karlsruhe; Germany Resource Report Resource Website |
Karlsruhe Institute of Technology; Karlsruhe; Germany (RRID:SCR_001552) | institution | Public research university in Germany for engineering and natural sciences. | university, engineering, natural science, technology, public |
is parent organization of: Bioinformatic Harvester IV (beta) at Karlsruhe Institute of Technology is parent organization of: re3data.org |
Free, Freely available | grid.7892.4, ISNI: 0000 0001 0075 5874, nlx_48421, Crossref funder ID: 100009133, Wikidata: Q309988 | https://ror.org/04t3en479 | SCR_001552 | KIT | 2026-07-25 12:05:07 | 0 |
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