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http://www.nitrc.org/projects/genr/

An MRI resource which provides age-appropriate images of children. It includes an average, age-appropriate T1-weighted image, constructed from 130 typically developing children ages 6-to-10 and a set of 32 resting-state ICA components. These components were generated from 494 typically developing children, ages 6-to-10 years old, using the MELODIC ICA tool, bootstrapped with 1000 resamples. Both of these resources are described in detail in a manuscript submitted for publication.

Proper citation: Generation R Pediatric MRI Resources (RRID:SCR_014114) Copy   

•   Source: SciCrunch Registry

https://nih-lurn.org/

A research consortium with the long term goal of developing and testing measurement tools to describe symptoms of lower urinary tract dysfunction (LUTD) in women and men. The group plans to study targeted populations of patients with LUTD in order to expand our understanding of the causes of symptoms and common ways that symptoms change over time. The researchers will also collect biosamples from patients for current and future study of LUTD.

Proper citation: Symptoms of Lower Urinary Tract Dysfunction Research Network (LURN) (RRID:SCR_014378) Copy   

•   Source: SciCrunch Registry

http://www.citisletstudy.org/

Network of clinical centers and a data coordinating center established to conduct studies of islet transplantation in patients with type 1 diabetes.

Proper citation: Clinical Islet Transplantation Consortium (CITC) (RRID:SCR_014385) Copy   

•   Source: SciCrunch Registry

http://www.definiens.com/research/tissue-studio/developer-xd

A development environment designed to create automated image analysis solutions for segmentation and classification tasks. It delivers quantitative and consistent data for any type of image (e.g., IHC, ISH, IF images in different formats). Developer XD also contains a large library of image analysis algorithms, which users can add to, for whole slide images and tissue microarrays (TMAs). It can be integrated with an existing Tissue Studio installation.

Proper citation: Definiens Developer XD (RRID:SCR_014283) Copy   

•   Source: SciCrunch Registry

http://www.celllineauthentication.com/

A material analysis service of the commercial organization Genetica DNA Laboratories which provides authentication of human cancer cell lines, stem cell lines and xenografts utilizing STR DNA technology.

Proper citation: Cell Line Authentication Testing (RRID:SCR_014504) Copy   

•   Source: SciCrunch Registry

http://www.vsni.co.uk/products/genstat/

A statistical software which can be used for basic statistics, experimental design, sample size calculations, and analysis of linear mixed models, time series, and spatial analysis.

Proper citation: GenStat (RRID:SCR_014595) Copy   

•   Source: SciCrunch Registry

https://cran.r-project.org/web/packages/HMP/index.html

An R-package which uses Dirichlet-Multinomial distribution to perform formal hypothesis testing on the species abundance distribution of human microbiome data, and to calculate power and sample size requirements for human microbiome experiments.

Proper citation: Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP (RRID:SCR_014612) Copy   

•   Source: SciCrunch Registry

http://www.opentargets.org

A public–private initiative that supports research that provides evidence on the biological validity of therapeutic targets and that gain insight into the effectiveness of pharmacological intervention. It aims to provide a research and development framework that applies human disease. It shares its information openly.

Proper citation: Open Targets (RRID:SCR_014622) Copy   

•   Source: SciCrunch Registry

http://chnfoundation.org/

A non-profit organization that awards grants to a broad spectrum of charities, including those that benefit spinal cord injury efforts. The Foundation is primarily dedicated to funding extensive research, education and quality of life programs for improving the lives of people affected by spinal cord injury.

Proper citation: CRAIG H. NEILSEN FOUNDATION (RRID:SCR_014552) Copy   

•   Source: SciCrunch Registry

http://www.brainandspinalinjury.org

A center that conducts basic science and clinical research concerning spinal cord injury located at both the University of California San Francisco and the Zuckerberg San Francisco General Hospital.

Proper citation: UCSF Brain and Spinal Injury Center (UCSF-BASIC) (RRID:SCR_014553) Copy   

•   Source: SciCrunch Registry

http://enigma.ini.usc.edu/protocols/dti-protocols/

Pipeline which provides tools to extract whole-brain average and regional measurements from DTI images including FA, AD, RD and MD. Protocols for preprocessing, ENIGMA-DTI processing (skeletonization and ROI extraction), and GWAS analysis are available. Software tools used for each process are listed within the protocols.

Proper citation: ENIGMA-DTI Pipeline (RRID:SCR_014649) Copy   

•   Source: SciCrunch Registry

https://ecocyte-us.com/

Supplier and servicer of products for expression studies in Xenopus laevis oocytes. Products include overnight delivery of freshly prepared Xenopus laevis oocytes, Cell & Tissue Media necessary during preparation, maintenance, and recording of Xenopus oocytes and lab chemicals. Services for pharmacological studies include heterologous expression and in vitro electrophysiology.

Proper citation: EcoCyte Bioscience (RRID:SCR_014773) Copy   

•   Source: SciCrunch Registry

https://www.schrodinger.com/

Commercial ogranization which provides molecular and drug discovery software and services to researchers. American software company that develops chemical simulation software for use in pharmaceutical, biotechnology, and materials science research. Provides products ranging from general molecular modeling programs to a full suite of chemical simulation and drug design software, including ligand- and structure-based methods.

Proper citation: Schrodinger (RRID:SCR_014879) Copy   

•   Source: SciCrunch Registry

http://www.eyesopen.com/oedocking

Complementary OEDocking tool for virtual screening, it performs a systematic and non-stochastic examination of all possible protein-ligand poses. The software also filters for shape complementarity and chemical feature alignment before selecting and optimizing protein-ligand poses.

Proper citation: FRED - Fast exhaustive docking (RRID:SCR_014885) Copy   

•   Source: SciCrunch Registry

http://www.lji.org

Institute dedicated to research in immunology by utilizing the academic and research communities in the La Jolla area as well as technological advances in biomedical research, imaging and analysis. Specific topics include autoimmune disease, cancer, allergies, infectious diseases and inflammation.

Proper citation: La Jolla Institute for Immunology (RRID:SCR_014845) Copy   

•   Source: SciCrunch Registry

http://www.essex.ac.uk/

A public research university in Colchester, Essex, England. The institution has degree programs that span the humanities, social sciences, and health.

Proper citation: University of Essex; England; United Kingdom (RRID:SCR_014725) Copy   

•   Source: SciCrunch Registry

http://ibrain.nuaa.edu.cn/

Brain research group affiliated with the Nanjing University of Aeronautics and Astronautics (NUAA) in China. The main research interests of iBRAIN include developing methods in machine learning, data mining, neural computation, and related areas for decoding brain functions or recognizing brain disease. Research related code and datasets can be found on the main site.

Proper citation: iBRAIN (RRID:SCR_014691) Copy   

•   Source: SciCrunch Registry

http://www.adaptivebiotech.com

Commercial organization which combines high-throughput sequencing and bioinformatics to profile T-cell and B-cell receptors.

Proper citation: Adaptive Biotechnologies (RRID:SCR_014709) Copy   

•   Source: SciCrunch Registry

http://www.lji.org/faculty-research/scientific-cores/bioinformatics/#overview

Core Facility provides support for short or long-term projects requiring expertise the analysis of biological datasets. The services provided include the analysis of large-scale datasets (e.g. next-gen sequencing data, microarrays, etc.), the development of customized databases and reusable analysis pipelines, guidance on experimental design, support with technical sections of manuscripts and grants, and training on analysis software packages. All services are charged at our hourly rate.

Proper citation: La Jolla Institute for Immunology Bioinformatics Core Facility (RRID:SCR_014831) Copy   

•   Source: SciCrunch Registry

http://www.awmf.org/en

An association of various medical entities in Germany. The organization advises on matters and tasks of fundamental and interdisciplinary interest in medicine, develops recommendations and resolutions and represents them at the institutions occupied with such tasks, such as research strategies, education, and postgraduate training.

Proper citation: Association of the Scientific Medical Societies in Germany (RRID:SCR_014716) Copy   

•   Source: SciCrunch Registry