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https://www.ncbi.nlm.nih.gov/genbank/sars-cov-2-seqs/
Collection of SARS-CoV-2 sequences currently available in GenBank genetic sequence database and Sequence Read Archive. Updated as additional sequences are released.
Proper citation: SARS-CoV-2-Sequences (RRID:SCR_018319) Copy
https://www.ucop.edu/uc-health/functions/center-for-data-driven-insights-and-innovations-cdi2.html
Data warehouse using Observational Medical Outcomes Partnership standard to integrate patient data across University of California health systems. Data asset created by electronic health records from six health systems as well as claims data from UC self-funded health plans and external sources of data such as Vizient and California Office of Statewide Health Planning and Development. Shared data and analytic environment designed to improve research and patient treatments.
Proper citation: UC Health clinical data warehouse (RRID:SCR_018284) Copy
https://www.rd-alliance.org/groups/rda-covid19
Guidelines for data deposition in any common data hub or platform to facilitate data sharing in public health emergencies for scientific research.
Proper citation: Research Data Alliance Working Group (RRID:SCR_018283) Copy
https://midasnetwork.us/covid-19/
Portal for COVID-19 modeling research. Public access data collections with documented metadata.Computational models to study transmission dynamics of broad range of infectious diseases.
Proper citation: Modeling Infectious Disease Agents Study online portal for COVID-19 (RRID:SCR_018281) Copy
https://www.xsede.org/covid19-hpc-consortium
Consortium encompasses computing capabilities from powerful and advanced computers in the world. Used to empower researchers to accelerate understanding of COVID-19 virus and development of treatments and vaccines to help address infections. Teams who receive Consortium access will publish their results in open scientific literature. All supported projects will have name of principal investigator, project title and project abstract posted to COVID-19 HPC Consortium web site.
Proper citation: COVID-19 High Performance Computing Consortium (RRID:SCR_018287) Copy
https://ncats.nih.gov/n3c/about
Portal for centralized national data to study COVID-19 and identify potential treatments.Centralized, secure analytics platform where patient privacy is protected. Enables collection and analysis of clinical, laboratory and diagnostic data from hospitals and health care plans. Data are provided after executing data transfer agreement with National Center for Advancing Translational Sciences. N3C is partnership among NCATS supported Clinical and Translational Science Awards Program hubs and National Center for Data to Health with overall stewardship by NCATS.
Proper citation: National COVID Cohort Collaborative (RRID:SCR_018757) Copy
https://marks.hms.harvard.edu/sars-cov-2/
Portal for quantitative models using virus sequence variation to predict mutation effects for SARS-CoV-2 proteins, alignments to homologs in other viruses, 3D structures, evolutionarily coupled residues and structure predictions.
Proper citation: SARS-CoV-2 mutation effects and 3D structure prediction from sequence covariation (RRID:SCR_018759) Copy
Resource for questions and answers about COVID-19.Electronic health record data from leading medical centers to answer clinical questions related to COVID-19 while maintaining patient and institutional privacy. Data never leaves medical centers, only aggregate statistics are exchanged.
Proper citation: COVID-19 Data Discovery from Clinical Records (RRID:SCR_019097) Copy
Portal for Global Mouse Models for COVID-19 consortium. Presents consortium, its statement and membership, and URLs for mouse COVID-19 resources worldwide.
Proper citation: mousecovid.org (RRID:SCR_018814) Copy
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