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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Calcium ActiVity Explorer Resource Report Resource Website 1+ mentions |
Calcium ActiVity Explorer (RRID:SCR_021498) | CAVE | software application, software resource, data analysis software, data processing software | Open source tool for combined analysis of head mounted calcium imaging and behavior. Used to analyze imaging data from head mounted microscopes simultaneously with behavioral data. | Head mounted calcium imaging, calcium imaging and behavior, calcium imaging, analyze imaging data, head mounted microscopes, behavioral data, OpenBehavior |
is listed by: OpenBehavior is related to: Calcium ActiVity Explorer project |
DOI:10.3389/fnins.2018.00958 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/cave/ | SCR_021498 | Calcium ActiVity Explorer | 2026-07-28 09:45:10 | 2 | ||||||
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idtracker.ai Resource Report Resource Website |
idtracker.ai (RRID:SCR_021499) | software application, software resource, data analysis software, data processing software | Software tool as Python Video Annotator software.Agorithm and tracking software that features two deep networks.Tracks animal identification and tracks when animals touch or cross paths in front of one another. | Python Video Annotator, animal identification tracking, animals touch tracking, tracking animal cross paths, OpenBehavior |
is listed by: OpenBehavior is related to: idtracker.ai project |
DOI:10.1038/s41592-018-0295-5 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/idtracker-ai/, https://idtrackerai.readthedocs.io/en/latest/ | SCR_021499 | 2026-07-28 09:45:14 | 0 | ||||||||
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Touchscreen Cognition Resource Report Resource Website |
Touchscreen Cognition (RRID:SCR_021550) | instrument resource, project portal, portal, data or information resource | Project related to cognitive testing method for rodents.Provides touchscreen operant platform for testing learning and memory in rats and mice.Includes device chambers that can be used to measure rodent behavior.Not open source device. | Cognitive testing, rodent, touchscreen operant platform, learning testing, memory testing, rat, mice, device chamber, measure rodent behavior, OpenBehavior | is listed by: OpenBehavior | Free, Freely available | SCR_021550 | 2026-07-28 09:45:16 | 0 | ||||||||||
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ACRoBaT Resource Report Resource Website |
ACRoBaT (RRID:SCR_021546) | instrument resource, project portal, portal, data or information resource | Project related to studying motor behavior. University of Washington in Seattle scientists have developed and published their device for training rats to perform modified center out task. | Instrument, automated device, training rats, perform modified center out task, OpenBehavior |
is listed by: OpenBehavior has parent organization: University of Washington; Seattle; USA |
DOI:10.1016/j.bbr.2017.11.031 | Free, Freely available | SCR_021546 | Automated Center out Rodent Behavioral Trainer | 2026-07-28 09:45:16 | 0 | ||||||||
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Visual stimulator with customizable light spectra Resource Report Resource Website |
Visual stimulator with customizable light spectra (RRID:SCR_021545) | instrument resource, project portal, portal, data or information resource | Project related to visual neuroscience.Provides spatial visual stimulator with arbitrary spectrum of light for visual neuroscientists.Open source, low cost visual stimulator which can be customized with up to 6 chromatic channels. Spectrum of light can be arbitrary and customizable to be adapted to different animal models based on their visual spectrum. Device details, including parts list and information for custom python library for generating visual stimuli (QDSpy), can be found in eLife publication. | Instrument, Visual stimulator, spatial visual stimulator, spectrum of light, visual neuroscience, OpenBehavior | is listed by: OpenBehavior | DOI:10.7554/elife.48779 | Commercially available | SCR_021545 | 2026-07-28 09:45:12 | 0 | |||||||||
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OpenVape project Resource Report Resource Website 1+ mentions |
OpenVape project (RRID:SCR_021485) | instrument resource, project portal, portal, data or information resource | Project related to conducting research on effects of nicotine vapor. Provides open source chamber system for rodents to experience regulated nicotine vapor exposure from JUUL electronic cigarette.Vapor exposure apparatus comprised of Arduino Uno microcontroller that relays coded instructions to H-bridge motor controller.H-bridge then sends specific signals to motors that regulate produced vapor sent to exposure chambers. | Regulated nicotine vapor exposure, JUUL electronic cigarette, vapor exposure apparatus, Arduino Uno microcontroller, H-bridge motor controller, exposure chamber, rodent nicotine exposure, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: University of Guelph; Ontario; Canada |
DOI:10.1523/eneuro.0279-20.2020 | Free, Available for download, Freely available | https://www.khokharlab.com/open-source-file-downloads | SCR_021485 | OpenVape | 2026-07-28 09:45:10 | 1 | |||||||
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An open source motorized swivel for in vivo neural and behavioral recordings project Resource Report Resource Website |
An open source motorized swivel for in vivo neural and behavioral recordings project (RRID:SCR_021482) | instrument resource, project portal, portal, data or information resource | Project related to neural recordings such as electrophysiology, calcium imaging, and optogenetics. Provides 3D-printed, motorized commutator for neural recordings of small animals in vivo.Open source motorized swivel for in vivo neural and behavioral recordings.Device operates independently of data acquisition system, and it can be controlled through any popular platform such as Arduino or Raspberry Pi. | Motorized commutator, neural recordings, small animals in vivo recording, motorized swivel, behavioral recordings, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1016/j.mex.2020.101167 | Free, Freely available | SCR_021482 | An open source motorized swivel for in vivo neural and behavioral recordings | 2026-07-28 09:45:10 | 0 | ||||||||
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LinCoM Resource Report Resource Website |
LinCoM (RRID:SCR_021519) | software application, data analysis software, software resource, data processing software, software toolkit | Software MATLAB package for linearization of place fields in complex mazes.Graph theoretic approach for production of linear place fields in complex mazes. Used for producing linear place fields for hippocampal cells during behavior in complex mazes.Specifically designed to deal with mazes with one or more decision points (e.g., T-maze, W-maze, double T-maze, radial maze, plus maze, etc). | Place fields linearization, complex mazes, producing linear place fields, hippocampal cells, complex mazes behavior, OpenBehavior |
is listed by: OpenBehavior is related to: LinCoM project |
DOI:10.1101/2020.08.17.253849 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/lincom/ | SCR_021519 | Linear place fields in Complex Mazes | 2026-07-28 09:45:11 | 0 | |||||||
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ezTrack Resource Report Resource Website 10+ mentions |
ezTrack (RRID:SCR_021496) | software application, data analysis software, software resource, data processing software, software toolkit | Open source video analysis pipeline for investigation of animal behavior. Platform independent set of behavior analysis pipelines using interactive Python ( (iPython/Jupyter Notebook) that researchers with no prior programming experience can use. | Track animal location, track motion, track animal freezing, OpenBehavior |
is listed by: OpenBehavior is related to: ezTrack project |
DOI:10.1038/s41598-019-56408-9 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/eztrack/ | SCR_021496 | 2026-07-28 09:45:23 | 10 | ||||||||
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Precision Syringe Pump Controller project Resource Report Resource Website |
Precision Syringe Pump Controller project (RRID:SCR_021493) | instrument resource, project portal, portal, data or information resource | Project related to dispensing precise volumes of fluid over precise timescales.System components include syringe holder and control board with syringe pump controller and programming library.Syringe pump controller was developed by American University scientists. | Syringe pump controller, dispensing precise fluid volumes, fluid over precise timescales, syringe holder, control board with syringe pump controller and programming library, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: American University; Washington D.C.; USA |
DOI:10.1523/eneuro.0240-19.2019 | Free, Freely available | SCR_021493 | Precision Syringe Pump Controller | 2026-07-28 09:45:23 | 0 | ||||||||
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Pi Virtual Reality System project Resource Report Resource Website |
Pi Virtual Reality System project (RRID:SCR_021490) | PiVR | instrument resource, project portal, portal, data or information resource | Project related to study of orientation behavior and neural circuit functions, through creation and analysis of small, freely moving animals in virtual realities. Provides virtual reality tool system for behavioral and neural circuit studies of small animals.Closed loop platform to study unrestrained sensorimotor behavior. | Virtual reality, behavioral and neural circuit, small animal, closed loop platform, unrestrained sensorimotor behavior, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1371/journal.pbio.3000712 | Free, Freely available | SCR_021490 | Pi Virtual Reality System | 2026-07-28 09:45:23 | 0 | |||||||
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Oculomatic Resource Report Resource Website |
Oculomatic (RRID:SCR_021525) | software application, software resource, data processing software, data acquisition software | Software tool for high speed eye tracking for Point Gray USB3.0 cameras.Oculomatic software tracks eye position within acquired image frame at frame rate dictated by image sensor. | High speed eye tracking, Point Gray USB3.0 camera, Oculomatic Eye Tracking system, track eye movements, OpenBehavior |
is listed by: OpenBehavior is related to: Oculomatic Eye Tracking project |
DOI:10.1016/j.jneumeth.2016.06.016 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/oculomatic-eye-tracking/ | SCR_021525 | Oculomatic eye tracking | 2026-07-28 09:45:11 | 0 | |||||||
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Open-tES project Resource Report Resource Website |
Open-tES project (RRID:SCR_021487) | instrument resource, project portal, portal, data or information resource | Project is related to transcranial Electrical Stimulation.Included system contains aluminum box stimulator with banana connectors for both anode and cathode on front panel,power supply on rear, power switch and serial port, LCD screen and three buttons on top panel that are used to input settings for stimulator. Device for delivering non-invasive neuromodulation techniques such as transcranial direct current stimulation. If device is used for certain types of tDCS (otDCS and tPCs) or external triggering, computer control must be used. Microcontroller is used to regulate operating speed and pulse width modulation switching frequency administrated by device. | Stimulation system, non-invasive neuromodulation techniques delivery, transcranial direct current stimulation, stimulator, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1371/journal.pone.0236061 | Free, Freely available | SCR_021487 | Open-tES | 2026-07-28 09:45:23 | 0 | ||||||||
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Pathfinder Resource Report Resource Website 100+ mentions |
Pathfinder (RRID:SCR_021520) | software application, software resource, data analysis software, data processing software | Open source software for analyzing spatial navigation search strategies. | Analyzing spatial navigation search strategies, spatial navigation, search strategies, OpenBehavior |
is listed by: OpenBehavior is related to: Pathfinder project |
DOI:10.1101/715961 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/pathfinder/ | SCR_021520 | 2026-07-28 09:45:15 | 225 | ||||||||
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Wave Surfer Resource Report Resource Website 10+ mentions |
Wave Surfer (RRID:SCR_021529) | software application, data analysis software, software resource, data processing software, data acquisition software | Open source software application for neurophysiology data acquisition and analysis. Program is based in MatLab, and evolved from earlier open source software package called Ephus. | neurophysiology data acquisition, neurophysiology data analysis, neurophysiology data, MATLAB, OpenBehavior |
is listed by: OpenBehavior is related to: Wave Surfer project |
Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/wave-surfer/ | SCR_021529 | 2026-07-28 09:45:24 | 46 | |||||||||
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Open Source Whisking Video Database Resource Report Resource Website |
Open Source Whisking Video Database (RRID:SCR_021407) | data or information resource, database | Shared database of videos featuring juvenile and adult male rats and adult male mice exploring stationary objects.This dataset includes wide variety of experimental conditions including genetic, pharmacological, and sensory deprivation interventions to explore how active sensing behavior is modulated by different factors. Database of high speed videos of whisking behavior in freely moving rodents.Open source high speed infrared videography database to study principles of active sensing in freely navigating rodents. | High speed videos, whisking behavior, freely moving rodents, infrared videography database, active sensing, OpenBehavior |
is listed by: OpenBehavior is related to: Open Source Whisking Video Database portal |
DOI:10.1093/gigascience/giy134 | Free, Freely available | https://edspace.american.edu/openbehavior/project/open-source-whisking-video-database/ | SCR_021407 | 2026-07-28 09:45:12 | 0 | ||||||||
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Open Face Homecage Running Wheel Resource Report Resource Website |
Open Face Homecage Running Wheel (RRID:SCR_023642) | instrument resource, software resource | Open source, printable, open faced running wheels for mice residing in home cage that is automated to collect locomotor information such as distance traveled, wheel direction, and velocity. Running wheel system available on GitHub contains code and information to create and run running wheels. System consists of 3D printed wheel, Raspberry Pi 0 W, and supporting components. | Running wheels for mice, OpenBehavior, instrument, running wheels, 3D printed wheel, | is listed by: OpenBehavior | PMID:36241420 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/running-wheel/ | SCR_023642 | 2026-07-28 09:45:59 | 0 | ||||||||
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B-CALM Resource Report Resource Website 1+ mentions |
B-CALM (RRID:SCR_023884) | instrument resource, software resource | Open source system for behavioral control based on Arduino Mega microcontroller and MATLAB based graphical interface and analysis code. Behavior controller optimized and customized for associative learning and memory tasks. Provided software should be able to control many different types of hardware for different task configurations. | OpenBehavior, instrument, behavioral controller, associative learning and memory, | is listed by: OpenBehavior | NIMH R00MH118422; NIMH R01MH129582; NIAAA R01AA029661; Scott Alan Myers Endowed Professorship |
PMID:37464151 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/b-calm/ | SCR_023884 | 2026-07-28 09:45:58 | 1 | |||||||
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RatInABox Resource Report Resource Website 1+ mentions |
RatInABox (RRID:SCR_023682) | software toolkit, software resource | Software Python toolkit for modelling locomotion and neuronal activity in continuous environments. Used to model realistic rodent locomotion and generate synthetic electrophysiological data from spatially modulated cell types. | OpenBehavior, modelling locomotion and neuronal activity, continuous environments, model realistic rodent locomotion, generate synthetic electrophysiological data, spatially modulated cell types, | is listed by: OpenBehavior | DOI:10.1101/2022.08.10.503541 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/ratinabox/ | SCR_023682 | 2026-07-28 09:45:57 | 1 | ||||||||
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Dual Port Lick Detector Resource Report Resource Website |
Dual Port Lick Detector (RRID:SCR_021521) | software toolkit, software resource | Distribution package for Dual Port Lick Detector.Package includes files relevant to building lick detector. | Building lick detector files, lick detector, OpenBehavior |
is listed by: OpenBehavior is related to: Dual port Lick Detector project |
DOI:10.1152/jn.00500.2018 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/dual-port-lick-detector/ | SCR_021521 | DP-Lick-Detector | 2026-07-28 09:45:24 | 0 |
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