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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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FreemoVR project Resource Report Resource Website 1+ mentions |
FreemoVR project (RRID:SCR_021551) | project portal, data or information resource, portal | Portal related to virtual reality for freely moving animals.Provides virtual reality system set up for unrestrained animals.System developed by University of Frieburg scientists. This Virtual Reality system can be used with number of different species including mice, zebrafish, and Drosophila. | Virtual reality system, unrestrained animals, behavior, brain function, OpenBehavior |
is listed by: OpenBehavior is related to: FreemoVR has parent organization: University of Freiburg; Baden-Wurttemberg; Germany |
DOI:10.1038/nmeth.4399 | Free, Freely available | SCR_021551 | FreemoVR | 2026-07-28 09:45:25 | 2 | ||||||||
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DeepLabCut Project Resource Report Resource Website 50+ mentions |
DeepLabCut Project (RRID:SCR_021398) | project portal, data or information resource, portal | Project for markerless pose estimation of user defined body parts with deep learning. | OpenBehavior, animal pose estimation, markerless pose estimation, body parts, multi-animal pose estimation, B-SoID, Stytra, Kinemouse Wheel |
lists: DeepLabCut is listed by: OpenBehavior is related to: Anipose |
DOI:10.1038/s41593-018-0209-y | Free, Available for download, Freely Available | https://github.com/DeepLabCut/DeepLabCut | SCR_021398 | 2026-07-28 09:45:08 | 56 | ||||||||
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Pyper project Resource Report Resource Website |
Pyper project (RRID:SCR_021431) | project portal, data or information resource, portal | Project related to motion tracking of specimen in open field. Provides software tool for motion tracking.Used to track path of object of interest in live feed from camera or recorded video. Used to track rodents in open field maze as well as retina of mice.New version of Pyper allows to customise image processing to track different kind of objects. | Motion tracking, open field, track path of object, live feed from camera, live feed recorded video, track rodents, open field maze, OpenBehavior |
is listed by: OpenBehavior is related to: Pyper |
Free, Freely available | SCR_021431 | Pyper | 2026-07-28 09:45:08 | 0 | |||||||||
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FaceMap project Resource Report Resource Website |
FaceMap project (RRID:SCR_021428) | project portal, data or information resource, portal | Project related to videographic processing of head fixed rodent behaviors. Provides software toolbox for unsupervised video analysis of rodent behavior. | Unsupervised video analysis, rodent behavior, videographic processing, head fixed rodent behavior, head fixed rodent, OpenBehavior |
is listed by: OpenBehavior is related to: FaceMap |
DOI:10.1101/306019 | Free, Freely available | SCR_021428 | FaceMap | 2026-07-28 09:45:08 | 0 | ||||||||
|
ZebraTrack project Resource Report Resource Website |
ZebraTrack project (RRID:SCR_021429) | project portal, data or information resource, portal | Project related to distraction free behavioral acquisition. Provides imaging setup for distraction free behavioral acquisition with automated tracking using open source ImageJ software and workflow for extraction of behavioral endpoints of zebrafish. Used for online tracking of larval zebrafish at high framerates.Provides user interface to run experiments as well as flexible design to allow definition of arbitrary open- and closed- loop experiments. | Track freely swimming larval zebrafish, realtime larval zebrafish swimming, larval zebrafish tracking, distraction free behavioral acquisition, behavior measurement, freely moving, OpenBehavior | is listed by: OpenBehavior | DOI:10.1016/j.jneumeth.2016.07.004 | Free, Freely available | SCR_021429 | ZebraTrack | 2026-07-28 09:45:12 | 0 | ||||||||
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neurotic project Resource Report Resource Website |
neurotic project (RRID:SCR_021403) | project portal, data or information resource, portal | Project about synchronizing video and neural signals. Provides software Python toolbox for interactive characterization in neuroscience.Software tool used to review and annotate signal data synchronized with video, performs simple initial analyses including signal filtering and spike detection, supports variety of file formats. | Anotate electrophysiology data, interactive characterization, neural data and video, signal data, signal filtering, spike detection, OpenBehavior |
is listed by: OpenBehavior is related to: neurotic |
DOI:10.1523/eneuro.0085-20.2020 | Free, Freely available | SCR_021403 | neurotic, NEUROTIC, NEUROscience Tool for Interactive Characterization | 2026-07-28 09:45:08 | 0 | ||||||||
|
DeepFly3D project Resource Report Resource Website |
DeepFly3D project (RRID:SCR_021400) | project portal, data or information resource, portal | Project related to deep learning based pose estimator for studying how neural circuits control limbed behaviors in tethered Drosophila. Includes Deep Fly image annotation tool for pose estimation and to permit further correction of 2D pose estimates, which are automatically converted to 3D pose. | Image annotation, pose tracking, pose estimation, motor circuit, behavioral measure, accurate 3D pose estimation, OpenBehavior |
is listed by: OpenBehavior is related to: DeepFly3D |
DOI:10.7554/elife.48571 | Free, Freely available | SCR_021400 | DeepFly3D | 2026-07-28 09:45:19 | 0 | ||||||||
|
RodentJoystick Resource Report Resource Website |
RodentJoystick (RRID:SCR_023482) | project portal, data or information resource, portal | Project features single board real time input/output system including touch sensing joysticks to quantify mouse forelimb trajectories with micron millisecond spatiotemporal resolution, which resolves mouse forelimb kinematics and further allows extraction of primitives. Joystick increases spatial precision, and reduces displacement force. Joystick is then integrated into automated home cage system to train mice in center out reach task. | OpenBehavior, touch sensing joysticks, quantify mouse forelimb trajectories, micron millisecond spatiotemporal resolution, mouse forelimb kinematics, instrument | is listed by: OpenBehavior | PMID:30540551 | Free, Freely available | https://github.com/GoldbergLab/RodentJoystick/wiki | SCR_023482 | 2026-07-28 09:45:56 | 0 | ||||||||
|
Laubach Lab GitHub Repository project Resource Report Resource Website |
Laubach Lab GitHub Repository project (RRID:SCR_021464) | instrument resource, project portal, portal, data or information resource | Portal related to control and decision making, focusing on role of prefrontal cortex. American University scientists through their GitHub repository provide 3D print files for many of behavioral devices used in their lab, including Nosepoke and Lickometer designed from rats. | Prefrontal cortex, behavioral devices, 3D print files collection, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: American University; Washington D.C.; USA |
Free, Freely available | SCR_021464 | Laubach Lab GitHub Repository | 2026-07-28 09:45:09 | 0 | |||||||||
|
Voluntary Access Static Incapacitance Chamber project Resource Report Resource Website 1+ mentions |
Voluntary Access Static Incapacitance Chamber project (RRID:SCR_021458) | VASIC | instrument resource, project portal, portal, data or information resource | Project related to assessment of pain in animal models.Provided system includes weight bearing device for high throughput and unbiased behavioral pain assessment in rodents.Includes custom printed circuit board, infrared sensor, Arduino microcontroller, 3D printed parts, and open source software for analysis. | Weight bearing, behavioral pain assessment, rodent pain assessment, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1016/j.ohx.2018.e00031 | Free, Freely available | SCR_021458 | Voluntary Access Static Incapacitance Chamber | 2026-07-28 09:45:09 | 1 | |||||||
|
ArduiPod Box project Resource Report Resource Website |
ArduiPod Box project (RRID:SCR_021466) | instrument resource, project portal, portal, data or information resource | Project related to presenting visual and auditory stimuli, recording behavior in form of nose pokes or screen touches, and delivering liquid rewards. ProvidesOperant chamber built with iPod Touch and Arduino microcontroller as main components. | Operant conditioning chamber, visual stimuli presentation, auditory stimuli presentation, record behavior, nose pokes, screen touches, deliver liquid reward, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:0.3758/s13428-013-0367-5 | Free, Freely available | SCR_021466 | ArduiPod Box | 2026-07-28 09:45:22 | 0 | ||||||||
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Joystick project Resource Report Resource Website |
Joystick project (RRID:SCR_021442) | instrument resource, project portal, portal, data or information resource | Project related to studying motor behavior and decision making in mice. Open source behavior training platform for studying motor control, decision making, and reaching reaction time. Enables behavioral work to study unexplored features of action selection, motivation, and value based decisions. | Motor control, decision making, reaction time, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1523/eneuro.0523-19.2020 | Free, Freely available | SCR_021442 | Joystick | 2026-07-28 09:45:21 | 0 | ||||||||
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Catalepsy Bar project Resource Report Resource Website |
Catalepsy Bar project (RRID:SCR_021439) | instrument resource, project portal, portal, data or information resource | Project related to measuring of muscular rigidity that can result from several factors including Parkinsons disease, or pharmacological exposure to antipsychotics or cannabis. Provides automated apparatus for measuring catalepsy that increases measurement accuracy and reduces observer bias.Catalepsy bar test automatically measures and records time it takes for rat to remove its forelimbs from bar. 3D printed test apparatus used to make catalepsy measurements in rats more standardized and accurate. | Automated apparatus, measuring catalepsy, measurement accuracy, observer bias reduction, catalepsy bar test, automatically records time, remove forelimbs from bar, rat, OpenBehavior, Instrument |
is listed by: OpenBehavior has parent organization: University of Guelph; Ontario; Canada |
DOI:10.1523/eneuro.0488-19.2020 | Free, Available for download, Freely available | https://www.khokharlab.com/open-source-file-downloads | SCR_021439 | Catalepsy Bar | 2026-07-28 09:45:21 | 0 | |||||||
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Skinner Box project Resource Report Resource Website |
Skinner Box project (RRID:SCR_021437) | instrument resource, project portal, portal, data or information resource | Project related to training animal behavior. Provides system which includes full behavioral apparatus and software platform. System includes software tool for data logging and analysis. | Open Skinner Box, data logging, data analysis, behavioral system, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: Skinner Box |
Free, Freely available | SCR_021437 | Skinner Box | 2026-07-28 09:45:09 | 0 | |||||||||
|
flyPAD project Resource Report Resource Website |
flyPAD project (RRID:SCR_021449) | instrument resource, project portal, portal, data or information resource | Project related to analysis of behavior and of neural activity. Provides FPGA code for running main board of flyPAD. | FPGA code, running main board of flyPAD, VHDL, Quartus 2, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: flyPAD |
DOI:10.1038/ncomms5560 | Free, Freely available | SCR_021449 | flyPAD | 2026-07-28 09:45:09 | 0 | ||||||||
|
DeepBehavior Resource Report Resource Website |
DeepBehavior (RRID:SCR_021414) | software application, data analysis software, software resource, data processing software, software toolkit | Software toolbox that automates taking high speed quality video to track behavior to analyze and track behavior in rodents and humans. | track behavior, analyze and track behavior, rodent, human, automated analysis, imaging data, OpenBehavior |
is listed by: OpenBehavior is related to: DeepBehavior project |
DOI:10.3389/fnsys.2019.00020 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/deepbehavior/ | SCR_021414 | 2026-07-28 09:45:12 | 0 | ||||||||
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Low Cost Open Source Eye Tracking project Resource Report Resource Website |
Low Cost Open Source Eye Tracking project (RRID:SCR_021415) | instrument resource, project portal, portal, data or information resource | Project related to eye tracking system for human research.System includes open source software for accurate eye tracking. Can identify shapes such as circles, lines, and triangles.You can rotate and mirror images and also use variety of filters.Capable of processing video in real-time for optical flow. App for viewing multiple video streams from USB cameras. | Real time eye tracking, identify shapes, identify circles, identify lines, identify triangles, fixed point laser beacons, camera, processing video in real time, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: Low Cost Open Source Eye Tracking |
Free, Freely available | SCR_021415 | Low Cost Open Source Eye Tracking | 2026-07-28 09:45:20 | 0 | |||||||||
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Locomouse project Resource Report Resource Website |
Locomouse project (RRID:SCR_021390) | instrument resource, project portal, portal, data or information resource | Project related to study movement coordination in free walking mice. Provides noninvasive system consisting of cameras and machine learning algorithms that allow for three dimensional detection and tracking of mouse paws, tail, and nose. | Movement study, movementcoordination, free walking mice, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: LocoMouse |
DOI:10.7554/elife.07892 | Free, Freely available | SCR_021390 | Locomouse | 2026-07-28 09:45:11 | 0 | ||||||||
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LocoMouse Resource Report Resource Website |
LocoMouse (RRID:SCR_021397) | software application, software resource, data analysis software, data processing software | Software kinematics analysis tool used to study movement coordination and analyzing limb, head, and tail kinematics of freely walking mice. | Movement study, movementcoordination, free walking mice, OpenBehavior |
is listed by: OpenBehavior is related to: Locomouse project |
DOI:10.7554/elife.07892 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/locomouse/ | SCR_021397 | 2026-07-28 09:45:19 | 0 | ||||||||
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DeepPoseKit project Resource Report Resource Website |
DeepPoseKit project (RRID:SCR_021395) | instrument resource, project portal, portal, data or information resource | Project related to pose estimation and tracking.Includes software toolkit for 2D pose estimation of user defined keypoints using deep learning.Method for pose estimation developed by behavioral scientists at the Max Planck Institute of Animal Behavior. | 2D pose estimation, animal pose estimation, animal behavior, DeepLabCut, Leap, Max Planck Institute, OpenBehavior, Instrument |
is listed by: OpenBehavior is related to: DeepPoseKit |
DOI:10.7554/elife.47994 | Free, Freely available | SCR_021395 | DeepPoseKit | 2026-07-28 09:45:07 | 0 |
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