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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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HIstome: The Histone Infobase Resource Report Resource Website 1+ mentions |
HIstome: The Histone Infobase (RRID:SCR_006972) | HIstome | data or information resource, database | Database of human histone variants, sites of their post-translational modifications and various histone modifying enzymes. The database covers 5 types of histones, 8 types of their post-translational modifications and 13 classes of modifying enzymes. Many data fields are hyperlinked to other databases (e.g. UnprotKB/Swiss-Prot, HGNC, OMIM, Unigene etc.). Additionally, this database also provides sequences of promoter regions (-700 TSS +300) for all gene entries. These sequences were extracted from the UCSC genome browser. Sites of post-translational modifications of histones were manually searched from PubMed listed literature. Current version contains information for about ~50 histone proteins and ~150 histone modifying enzymes. HIstome is a combined effort of researchers from two institutions, Advanced Center for Treatment, Research and Education in Cancer (ACTREC), Navi Mumbai and Center of Excellence in Epigenetics (CoEE), Indian Institute of Science Education and Research (IISER), Pune. | histone, protein, enzyme, modifying enzyme, post-translational modification, variant, promoter region, gene, epigenetic regulation, india, bio.tools |
is listed by: re3data.org is listed by: Debian is listed by: bio.tools has parent organization: ACTREC - Advanced Centre for Treatment Research and Education in Cancer |
Cancer | ACTREuropean Union - Advanced Centre for Treatment Research and Education in Cancer ; Government of India |
PMID:22140112 | Free, Public, Acknowledgement requested | biotools:histome, r3d100010977, nlx_151419 | http://www.actrec.gov.in/histome/, https://bio.tools/histome, https://doi.org/10.17616/R3RD0R | http://www.histome.net/ | SCR_006972 | 2026-07-28 09:41:42 | 1 | |||
|
HPRD - Human Protein Reference Database Resource Report Resource Website 1000+ mentions |
HPRD - Human Protein Reference Database (RRID:SCR_007027) | HPRD | data or information resource, database | Database that represents a centralized platform to visually depict and integrate information pertaining to domain architecture, post-translational modifications, interaction networks and disease association for each protein in the human proteome. All the information in HPRD has been manually extracted from the literature by expert biologists who read, interpret and analyze the published data. | protein, disease, network, post-translational, proteome, protein binding, protein s, protein c, pathway, protein-protein interaction, protein expression, subcellular localization, phosphorylation motif, signaling pathway, protein sequence, blast, molecule, domain, motif, post-translational modification, protein isoform, FASEB list |
is used by: Mutation Annotation and Genomic Interpretation is used by: Pathway Analysis Tool for Integration and Knowledge Acquisition is used by: GEMINI is listed by: re3data.org is related to: Human Proteinpedia is related to: MatrixDB is related to: Interaction Reference Index is related to: Pathway Commons is related to: ConsensusPathDB is related to: Gene Ontology is related to: Agile Protein Interactomes DataServer has parent organization: Johns Hopkins University; Maryland; USA has parent organization: Institute of Bioinformatics; Bangalore; India |
PMID:18988627 PMID:16381900 PMID:14525934 |
Acknowledgement requested, Free, Non-commercial, Commercial requires license | nif-0000-00137, r3d100010978 | https://doi.org/10.17616/R3MK9N | SCR_007027 | Human Protein Reference Database | 2026-07-28 09:41:42 | 1266 | |||||
|
FAOSTAT Resource Report Resource Website 500+ mentions |
FAOSTAT (RRID:SCR_006914) | FAOSTAT | data or information resource, database | A multilingual database that provides large time-series and cross sectional data relating to hunger, food, agriculture, nutrition, fisheries, forestry and food aid by country and region from 1961 to present. Data can be searched, browsed, analyzed and downloaded. | agriculture, agricultural productivity, food supply, economic, forest, hunger, malnutrition, web service, food, trade, price, emission, investment, environment, FASEB list | is listed by: re3data.org | Free | r3d100010847, nif-0000-30554 | http://faostat.fao.org/site/368/DesktopDefault.aspx?PageID=368#ancor, http://faostat3.fao.org/faostat-gateway/go/to/home/E, https://doi.org/10.17616/R3N614 | SCR_006914 | 2026-07-28 09:41:39 | 886 | |||||||
|
ACEpepDB Resource Report Resource Website 1+ mentions |
ACEpepDB (RRID:SCR_010474) | ACEpepDB | data or information resource, database | Database of ~ 865 peptides where each record provides information on the food source, preparation, purification, reference(s) and any other additional information. The database provides a search and browsing option for a more personalized research experience. | food industry and trade, peptide antibiotics, peptide drug, peptide hormone, food industry, trade, peptide, antibiotics, drug, hormone, food source, purification |
is listed by: re3data.org has parent organization: CSIR-Central Food Technological Research Institute; Karnataka; India |
nlx_157747, r3d100010972 | SCR_010474 | ACEpepDB: Peptide Database of CFTRI, ACEpepDB: Peptide Database of Central Food Technological Research Institute, ACEpepDB: Peptide Database | 2026-07-28 09:42:48 | 4 | ||||||||
|
ASTER Resource Report Resource Website 100+ mentions |
ASTER (RRID:SCR_010478) | ASTER | data or information resource, database | An imaging instrument onboard Terra, the flagship satellite of NASA''s Earth Observing System (EOS) that collects and archives data to create detailed maps of land surface temperature, reflectance, and elevation. The ASTER project is a collaboration between NASA and the Japanese government to develop a scientific understanding of the Earth. | climatology, cartography, earth sciences, map, topographical surveying, geospatial data, land surface temperature, reflectance, elevation, FASEB list | is listed by: re3data.org | nlx_157751, r3d100011708 | SCR_010478 | ASTER - Advanced Spaceborne Thermal Emission and Reflection Radiometer, Advanced Spaceborne Thermal Emission and Reflection Radiometer, Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) | 2026-07-28 09:42:49 | 204 | ||||||||
|
The NINDS Human Cell and Data Repository (NHCDR) Resource Report Resource Website 10+ mentions |
The NINDS Human Cell and Data Repository (NHCDR) (RRID:SCR_016319) | NHCDR | tissue bank, biomaterial supply resource, material resource | Cell sources currently include fibroblasts and/or induced pluripotent stem cells for Alzheimer's Disease, Amyotrophic Lateral Sclerosis (ALS), Ataxia-telangiectasia, Frontotemporal Lobar Degeneration (FTD), Huntington's Disease, Parkinson's Disease, and healthy controls. Cell sources, including isogenic cell lines for current and new diseases covered by the NINDS will be added over the next several years. | Stem, cell, fibroblast, plutipotent, isogenic |
is used by: NIH Heal Project is recommended by: National Library of Medicine is listed by: re3data.org works with: Cellosaurus |
Alzheimer's Disease, Amyotrophic Lateral Sclerosis (ALS), Ataxia-telangiectasia, Frontotemporal Lobar Degeneration (FTD), Huntington's Disease, Parkinson's Disease | NLM ; NINDS |
Restricted | https://nindsgenetics.org/ | SCR_016319 | NINDS Human Cell and Data Repository (NHCDR) | 2026-07-28 09:44:11 | 16 | |||||
|
Microphysiology Systems Database Resource Report Resource Website 1+ mentions |
Microphysiology Systems Database (RRID:SCR_021126) | MPS-Db | data or information resource, database | Open source database used for analyzing and modeling compound interactions with human and animal organ models.Platform for experimental design, data management, and analysis, and to combine experimental data with reference data, to enable computational modeling. Resource for relating in vitro organ model data to multiple biochemical, preclinical, and clinical data sources on in vivo drug effects. | Compound interactions, human organ models, animal organ models, analyzing interactions, modeling interactions, |
is used by: NIH Heal Project is listed by: re3data.org |
NCATS UH3 TR00503; NIH Office of the Director S10 OD01226; U.S. Environmental Protection Agency |
PMID:28781990 | Free, Freely available | SCR_021126 | MPS database | 2026-07-28 09:45:03 | 4 | ||||||
|
Launchpad Resource Report Resource Website 10+ mentions |
Launchpad (RRID:SCR_006853) | Launchpad | software application, software repository, software resource, software development tool | A software collaboration platform that provides: Bug tracking, Code hosting using Bazaar, Code reviews, Ubuntu package building and hosting, Translations, Mailing lists, Answer tracking and FAQs, and Specification tracking. Launchpad can host your project''s source code using the Bazaar version control system. | sharing, software, tracking, translation, computer science, web service, source code | is listed by: re3data.org | GNU Affero General Public License, v3 | nif-0000-10278 | SCR_006853 | 2026-07-28 09:41:38 | 26 |
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