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Resource Name
RRID:SCR_028253 RRID Copied      
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Loom (RRID:SCR_028253)
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Resource Information

URL: https://linnarssonlab.org/loompy/format/index.html

Proper Citation: Loom (RRID:SCR_028253)

Description: Loom is an efficient HDF5-based file format for storing large, high-dimensional single-cell genomics datasets, including data, metadata, and clustering results. Loom file format is designed to efficiently hold large omics datasets. Typically, such data takes the form of a large matrix of numbers, along with metadata for the rows and columns. Loom files (.loom) are created in the HDF5 file format, which supports an internal collection of numerical multidimensional datasets. HDF5 is supported by many computer languages, including Python, R, MATLAB, Mathematica, C, C++, Java, and Ruby.

Synonyms: , .loom, Loom File Format

Resource Type: narrative resource, data or information resource, standard specification

Keywords: HDF5-based file format, hold large omics datasets, large matrix of numbers, metadata for rows and columns,

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