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URL: https://CRAN.R-project.org/package=oncoPredict
Proper Citation: oncoPredict (RRID:SCR_023872)
Description: Software tool bridges in vitro drug screening with in vivo drug and biomarker discovery. Predicts in vivo or cancer patient drug response and biomarkers to enrich for response from cell line screening data. Builds model using ridge regression, and enables biomarker discovery by imputing drug response in large cancer molecular datasets. Enables drug specific biomarker identification by correcting for general level of drug sensitivity shared among the population.
Resource Type: data analysis software, data processing software, software application, software resource
Defining Citation: PMID:34260682
Keywords: drug specific biomarker identification, drug screening, drug and biomarker discovery, cancer molecular datasets, drug response,
Availability: Free, Available for download, Freely available
Resource Name: oncoPredict
Resource ID: SCR_023872
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
