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URL: https://sites.google.com/view/brain-mapping
Proper Citation: brain-mapping (RRID:SCR_023845)
Description: Software tool to map histological slice sequences to Allen Mouse Brain Atlas without 3D Reconstruction. Automatically maps histological slice to its corresponding plane in Allen Mouse Brain Atlas to build plane wise mapping and then perform 2D nonrigid registration to build pixel wise mapping.
Resource Type: software application, software resource
Defining Citation: PMID:30618698
Keywords: Allen Mouse Brain Atlas, histological slice, map histological slice sequences to Allen Mouse Brain Atlas, 3D reconstruction,
Availability: Free, Available for download, Freely available
Resource Name: brain-mapping
Resource ID: SCR_023845
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
