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URL: https://github.com/fmaguire/Bridger_Assembler
Proper Citation: Bridger (RRID:SCR_017039)
Description: Software package as de novo trascriptome assembler for RNA-Seq data. Framework for de novo transcriptome assembly using RNA-seq data. Can assemble all transcripts from short reads without using reference. Input RNA-Seq reads in fasta or fastq format, and ouput all assembled candidate transcripts in fasta format. Operating system Unix/Linux.
Resource Type: data analysis software, data processing software, software application, software resource
Defining Citation: PMID:25723335
Keywords: de novo, transcripto, assembler, RNAseq, data, short, read, sequencing, bio.tools
Funding: NCRR P20 RR016460; NIGMS P20 GM103429; NSFC 61272016; NSFC 61432010
Availability: Free, Available for download, Freely available
Resource Name: Bridger
Resource ID: SCR_017039
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
