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Proper Citation: Protein Data Bank Markup Language (RRID:SCR_005085)
Description: Markup Language that provides a representation of PDB data in XML format. The description of this format is provided in XML schema of the PDB Exchange Data Dictionary. This schema is produced by direct translation of the mmCIF format PDB Exchange Data Dictionary Other data dictionaries used by the PDB have been electronically translated into XML/XSD schemas and these are also presented in the list below. * PDBML data files are provided in three forms: ** fully marked-up files, ** files without atom records ** files with a more space efficient encoding of atom records * Data files in PDBML format can be downloaded from the RCSB PDB website or by ftp. * Software tools for manipulating PDB data in XML format are available.
Abbreviations: PDBML
Synonyms: PDBML: Protein Data Bank Markup Language
Resource Type: data or information resource, interchange format, markup language, narrative resource, standard specification
Defining Citation: PMID:15509603
Keywords: xml
Funding: NSF ; NIGMS ; DOE ; NLM ; NCI ; NCRR ; NIBIB ; NINDS
Resource Name: Protein Data Bank Markup Language
Resource ID: SCR_005085
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Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) |
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
