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URL: http://compbio.cs.toronto.edu/prism/
Proper Citation: PRISM - Pair Read Informed Split Mapper (RRID:SCR_004812)
Description: Software for split read (reads which span across a structrual variant -- SV ) mapping and SV calling from the mapping result. It is able to detect small insertions and abitrary size deletions, inversions and tandom duplications with the direction of discordant read pairs. PRISM_CTX is a tool for detecting inter-chromosome trans-location events.
Abbreviations: PRISM (Pair Read Informed Split Mapper)
Synonyms: PRISM (Pair Read Informed Split Mapper), Pair Read Informed Split Mapper
Resource Type: software resource
Defining Citation: PMID:22851530
Keywords: structural variant, split read mapping, insertion, deletion, inversion, tandom duplication, discordant read pair, chromosome, trans-location event, duplication, breakpoint, genome
Availability: Free, Public
Resource Name: PRISM - Pair Read Informed Split Mapper
Resource ID: SCR_004812
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
