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URL: http://burgundy.cmmt.ubc.ca/cgi-bin/RAVEN/a?rm=home
Proper Citation: RAVEN (RRID:SCR_001937)
Description: Tool to search for putative regulatory genetic variation in your favorite gene. Single nucleotide polymorphisms (SNPs) (from dbSNP and user defined) are analyzed for overlap with potential transcription factor binding sites (TFBS) and phylogenetic footprinting using UCSC phastCons scores from multiple alignments of 8 vertebrate genomes., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
Abbreviations: RAVEN
Synonyms: Regulatory analysis of Variation in Enhancers, RAVEN - Regulatory analysis of Variation in ENhancers
Resource Type: analysis service resource, data analysis service, data or information resource, database, production service resource, service resource
Defining Citation: PMID:18208319
Keywords: transcription factor binding site, phylogenetic footprint, regulatory sequence variation, genetic variation, in silico, regulatory sequence, FASEB list
Availability: THIS RESOURCE IS NO LONGER IN SERVICE
Resource Name: RAVEN
Resource ID: SCR_001937
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
