Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
URL: http://tron-mainz.de/tron-facilities/computational-medicine/seq2hla/
Proper Citation: seq2HLA (RRID:SCR_001199)
Description: Software for obtaining an individualXs HLA class I and II type and expression using standard NGS (Next-generation sequencing) RNA-Seq data. It comprises mapping RNA-Seq reads against a reference database of HLA alleles, determining and reporting HLA type, confidence score and locus-specific expression level.
Abbreviations: seq2HLA
Synonyms: seq2HLA - HLA typing from RNA-Seq sequence reads
Resource Type: software resource
Defining Citation: PMID:23259685
Keywords: illumina, next-generation sequencing, rna-seq, hla, hla allele, hla typing
Funding: BMBF
Availability: THIS RESOURCE IS NO LONGER IN SERVICE
Resource Name: seq2HLA
Resource ID: SCR_001199
Expand Allis listed by |
|
has parent organization |
Johannes Gutenberg University Mainz; Rhineland-Palatinate; Germany |
We found {{ ctrl2.mentions.all_count }} mentions in open access literature.
We have not found any literature mentions for this resource.
We are searching literature mentions for this resource.
Most recent articles:
{{ mention._source.dc.creators[0].familyName }} {{ mention._source.dc.creators[0].initials }}, et al. ({{ mention._source.dc.publicationYear }}) {{ mention._source.dc.title }} {{ mention._source.dc.publishers[0].name }}, {{ mention._source.dc.publishers[0].volume }}({{ mention._source.dc.publishers[0].issue }}), {{ mention._source.dc.publishers[0].pagination }}. (PMID:{{ mention._id.replace('PMID:', '') }})
Check
for resource mentions.
A list of researchers who have used the resource and an author search tool
A list of researchers who have used the resource and an author search tool. This is available for resources that have literature mentions.
No rating or validation information has been found for seq2HLA.
No alerts have been found for seq2HLA.
Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
