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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
SS.SR-(D3Mco36-D3Mco46)/Jr Resource Report Resource Website |
RRID:RRRC_00660 | Rattus norvegicus | SS.SR-(D3Mco19-D3Mco5)/Jr rats were crossed with SS to yield F1, these heterozygous rats were intercrossed to obtain F2 which were screened to identify the SR-rat derived region, these were then crossed with SS to duplicate the recombinant chromosome Rat Resource and Research Center, | 00660 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2019-02-18) | RGD_1582188, 1582188, RRRC_660, RRRC_0660, RRRC_00660 | 2026-09-12 04:18:55 | 0 | |||||
|
HAS.LAS-(D2Rat53-D2Rat138)/Rar Resource Report Resource Website 1+ mentions |
RRID:RRRC_00729 | Rattus norvegicus | HAS1 (RGD:1578700) and LAS1(RGD:1578696) rats were reciprocally mated to produce an F1 generation. Congenics were bred by backcrossing F1 male to HAS1 and the offsprings were genotyped, Rat Resource and Research Center | 00729 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2019-02-26) | RGD_1641861, 1641861, RRRC_729, RRRC_0729, RRRC_00729 | 2026-09-12 04:18:54 | 1 | |||||
|
LEW.WKY-(D16Rat88-D16Rat40)/Tja Resource Report Resource Website |
RRID:RRRC_00708 | Rattus norvegicus | segment of interest of chr 16 from WKY/NCrl was introgressed into LEW/SsNHsd Rat Resource and Research Center | 00708 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Embryo; Cryopreserved Sperm (as of 2017-01-26) | RGD_2293354, 2293354, RRRC_708, RRRC_0708, RRRC_00708 | 2026-09-12 04:18:56 | 0 | |||||
|
RCS-rdy+/LavRrrc Resource Report Resource Website 1+ mentions |
RRID:RRRC_00317 | Rattus norvegicus | Developed by crossing an inbred RCS (rdy/rdy) with a cesarian developed Fischer (+/+) rat (from Charles River). The normal rats(+/rdy) were backcrossed to the RCS and the procedure repeated. Retinal Degeneration Rat Model Resource , Rat Resource and Research Center | 00317 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Live Animals; Cryopreserved Embryo; Cryopreserved Sperm (as of 2018-07-16) | RGD_1358277, 1358277, RRRC_317, RRRC_0317, RRRC_00317 | 2026-09-12 04:18:54 | 1 | |||||
|
DA.F344-(D7Rat22-D7Mit2)/Nsi Resource Report Resource Website |
RRID:RRRC_00679 | Rattus norvegicus | Congenic strain created by backcrossing F344/NHsd into DA/BklArbNsi 9 times then brother-sister mating to maintain in the homozygous state Rat Resource and Research Center | 00679 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2019-02-19) | RGD_1299875, 1299875, RRRC_679, RRRC_0679, RRRC_00679 | 2026-09-12 04:18:53 | 0 | |||||
|
SHR/N-cp Resource Report Resource Website |
RRID:RRRC_00231 | Rattus norvegicus | The spontaneously hypertensive corpulent (SHR/N-cp) rat developed at the National Institutes of Health (NIH) is a congenic strain in which obese homozygotes {cp/cp) are characterized by genetic obesity, mild hypertension, hyper-insulinemia, and glucose intolerance. This rat strain was initially derived by mating a male Koletsky rat that was heterozygous for the corpulent gene (cp/ +) to a female SHR ratof the Okamoto strain. A minimum of 12 backcrosses were carried out to eliminate the non-cp genes of the Ko-letsky strain. The obese (cp/cp) littermates develop glucosuria, proteinuria, and renal structural lesions resemblingdiabetic glomerulosclerosis. Rat Resource and Research Center | 00231 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Embryo (as of 2021-01-20) | RGD_728195, 728195, RRRC_231, RRRC_0231, RRRC_00231 | 2026-09-12 04:18:53 | 0 | |||||
|
BBDP.ACI-(D2Rat50-D2Rat63)/Sunn Resource Report Resource Website |
RRID:RGD_10043132 | Rattus norvegicus | 104 Mb region from ACI.BBDP-(RT1u),(Gimap5)/Sunn is introgressed into the BBDP/WorSunn background which carries the centromeric region of Iddm33 and telomeric region of Iddm26 | 10043132 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 10043132 | 2026-09-12 01:25:02 | 0 | |||||
|
BB.SHR-(D6Rat184-D6Rat101)/K Resource Report Resource Website |
RRID:RGD_631699 | Rattus norvegicus | Congenic strain originated from an inbred BB/OK strain crossed with diabetes-resistant SHR/Mol females. | 631699 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631699 | 2026-09-12 01:25:02 | 0 | |||||
|
SS.LEW-(D1Rat39-D1Rat131)/Jr Resource Report Resource Website |
RRID:RGD_631610 | Rattus norvegicus | Segment of chr 1 from Lewis which is an in-house colony was introgressed into Dahl salt-sensitive strain which was obtained from Charles River. | 631610 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631610 | 2026-09-12 01:25:02 | 0 | |||||
|
F344.NER-(D1Mgh6-D1Rat73)(D5Mgh4-D5Rat36)Lgi1m1/Kyo Resource Report Resource Website 1+ mentions |
RRID:RGD_10043382 | Rattus norvegicus | Triple congenic rat made by mating F344.NER-(D1Mgh6-D1Rat132)(D5Mgh4-D5Rat36)/Kyo and F344-Lgi1m1Kyo. National BioResource Project for the Rat in Japan | 10043382 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2023-12-29) | 10043382 | 2026-09-12 01:25:02 | 2 | |||||
|
WKY.SHR-(D1Rat236-D1M7Mit206)/Njs Resource Report Resource Website |
RRID:RGD_631592 | Rattus norvegicus | Congenic substrain derived by backcrossing congenic strain WKY.SHR-(D1Wox19-D1Mit2) to WKY | 631592 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631592 | 2026-09-12 01:25:02 | 0 | |||||
|
BBDP.ACI-(D2Mit8-D2Rat354)/Sunn Resource Report Resource Website |
RRID:RGD_10043127 | Rattus norvegicus | 104 Mb region from ACI.BBDP-(RT1u),(Gimap5)/Sunn is introgressed into the BBDP/WorSunn background which carries the centromeric region of Iddm26 and a small fragment of Iddm32 | 10043127 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 10043127 | 2026-09-12 01:25:02 | 0 | |||||
|
LEW.1AV1.DA-(D10Wox17-D10Rat135)/Ubc Resource Report Resource Website |
RRID:RGD_631597 | Rattus norvegicus | Congenic substrain derived from intercrosses of the Oia3 containing strain (LEW.1AV1.DA-(D10Rat20-D10Mgh1)x LEW.1AV1)F2 | 631597 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631597 | 2026-09-12 01:25:02 | 0 | |||||
|
SS.MNS-(Mme-Gca)/Ayd Resource Report Resource Website |
RRID:RGD_728138 | Rattus norvegicus | Segments from Milan normotensive rat were inserted in thre homologous region of Dahl salt-sensitive | 728138 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728138 | 2026-09-12 01:25:02 | 0 | |||||
|
SHR.BN-(Il6-Npy) Resource Report Resource Website |
RRID:RGD_629502 | Rattus norvegicus | This congenic carries a chromosome 4 segment derived from BN/Crl (Charles River) and repeated backcross to SHR/NCruk and selection for Il6 and Npy heterozygotes | 629502 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 629502 | 2026-09-12 01:25:02 | 0 | |||||
|
SS.LEW-(D10Rat207-D10Mgh1)/Ayd Resource Report Resource Website |
RRID:RGD_631703 | Rattus norvegicus | Congenic strain originated from an inbred SS strain | 631703 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631703 | 2026-09-12 01:25:02 | 0 | |||||
|
WKY.SHRSP-(D1Rat112-D1Wox29)/Izm Resource Report Resource Website |
RRID:RGD_728166 | Rattus norvegicus | A segment from SHRSP/Izm was transferred on a WKY/Izm background | 728166 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728166 | 2026-09-12 01:25:03 | 0 | |||||
|
SS.LEW-(D1Rat196-D1Mco36)/Jr Resource Report Resource Website |
RRID:RGD_728165 | Rattus norvegicus | Segment of chr 1 from Lewis which is an in-house colony was introgressed into Dahl salt-sensitive strain which was obtained from Charles River. | 728165 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728165 | 2026-09-12 01:25:03 | 0 | |||||
|
SS.LEW-(Nos2-D10M11Mit119)/Ayd Resource Report Resource Website |
RRID:RGD_728167 | Rattus norvegicus | Strains SS/Jr and LEW were bred for F1 then backcrossed to S to give BC1, this was backcrossed to S to give BC2 and so on till BC5, BC5 was crossed to S to duplicate the recombinant segment | 728167 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728167 | 2026-09-12 01:25:03 | 0 | |||||
|
SHR.WKY-(D1Wox19-D1Wox34)/Njs Resource Report Resource Website |
RRID:RGD_629487 | Rattus norvegicus | Fragment of the chromosome 1 derived from WKY and repeated backcross to SHR | 629487 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 629487 | 2026-09-12 01:25:03 | 0 |
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Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
