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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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daf-2(e1370)III; mkcIs13[sun-1p::rde-1::sun-1 3'UTR + unc-119(+)]II; rde-1(mck36)V; rrEx931[rgef-1p::gfp::rab-7; rol-6] line 1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062175 | Caenorhabditis elegans | daf-2(e1370)III; mkcIs13[sun-1p::rde-1::sun-1 3'UTR + unc-119(+)]II; rde-1(mck36)V; rrEx931[rgef-1p::gfp::rab-7; rol-6] line 1 | EMPTY | WB-STRAIN:WBStrain00062175 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-09-05 04:59:37 | 0 | |||||
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juSi164 unc-119(ed3) III; wtfIs335. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062213 | Caenorhabditis elegans | juSi164 unc-119(ed3) III; wtfIs335. | juSi164 [mex-5p::HIS-72::miniSOG + Cbr-unc-119(+)] III. wtfIs335 [5xQUAS+(delta)pes-10p::AI::eTsChR::unc-54 3'UTR + rab-3p::AI::QF+hGR::SL2::tagBFP::unc-54 3'UTR + rab-3p::his-24::tagRFP::unc-54 3'UTR + rab-3p::his-24::GCaMP6s::unc-54 3'UTR]. Keep plates covered to avoid unnecessary exposure to light. Pan-neuronal eTsChR on activation using dex treatment via QF+hGR. Worms also express calcium sensing fluorescence protein- GCaMP6s in nuclei of each neurons. Reporter construct contains an artificial intron (AI). Reference: Sharma AK, et al. Genetics 2024 May 11:iyae077. doi: 10.1093/genetics/iyae077 PMID: 38733622. | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00062213 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:38 | 0 | ||||
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wtfEx478. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062214 | Caenorhabditis elegans | wtfEx478. | wtfEx478 [rab-3p::AI::lite-1G::SL2::tagBFP::unc-54 3'UTR + unc-122p::GFP]. Pick GFP+ animals to maintain. Worms express purple/violet light-sensitive optogenetic protein LITE-1 pan-neuronallly and nuclear-localized blue fluorescent protein tagBFP via SL2 trans-slpicing regulatory sequence. Worms also express GFP in coelomocytes. Reporter construct contains an artificial intron (AI). Reference: Sharma AK, et al. Genetics 2024 May 11:iyae077. doi: 10.1093/genetics/iyae077 PMID: 38733622. | WB-STRAIN:WBStrain00062214 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:38 | 0 | ||||||
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juSi164 unc-119(ed3) III; wtfEx296. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062211 | Caenorhabditis elegans | juSi164 unc-119(ed3) III; wtfEx296. | juSi164 [mex-5p::HIS-72::miniSOG + Cbr-unc-119(+)] III. wtfEx296 [rab-3p::AI::gur-3G::unc-54 3'UTR + rab-3p::AI::prdx-2G::SL2::his-24::tagRFP::unc-54 3'UTR + rab-3p::his-24::GCaMP6s::unc-54 3'UTR]. Pick RFP+ to maintain. Keep plates covered to avoid unnecessary exposure to light. Worms expressing a purple light-sensitive optogenetic protein system: pan-neuronal expression of GUR-3 and PRDX-2 with nuclear-localized tagRFP and GCaMP6s. Reporter construct contains an artificial intron (AI). Reference: Sharma AK, et al. Genetics 2024 May 11:iyae077. doi: 10.1093/genetics/iyae077 PMID: 38733622. | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00062211 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:38 | 0 | ||||
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daf-2(e1370)III; rrEx957[rgef-1p::mKate::T2A::gfp::rab-7; rol-6] line 1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062179 | Caenorhabditis elegans | daf-2(e1370)III; rrEx957[rgef-1p::mKate::T2A::gfp::rab-7; rol-6] line 1 | EMPTY | WB-STRAIN:WBStrain00062179 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-09-05 04:59:37 | 0 | |||||
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wtfIs491. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062216 | Caenorhabditis elegans | wtfIs491. | Made_by: Anuj Sharma & Kevin Chen|"wtfIs491 [inx-1p::twk-18(gf)::mCherry + unc-122p::RFP]. AIB(-) activated potassium channel. Expression of twk-18 gain-of-function mutant in AIB neurons causes permanent inhibition. RFP expression in coelomocytes. Reference: Chen KS, et al. Olfactory learning alters navigation strategies and behavioral variability in C. elegans. ArXiv, Feb 23:arXiv:2311.07117v2. PMID: 38013890." | WB-STRAIN:WBStrain00062216 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:38 | 0 | ||||||
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wtfIs145. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062208 | Caenorhabditis elegans | wtfIs145. | wtfIs145 [rab-3p::his-24::GCaMP6s::unc-54 3'UTR + pha-1(+)]. Pan-neuronal expression of nuclear-localized GCaMP6s. Reference: Sharma AK, et al. Genetics 2024 May 11:iyae077. doi: 10.1093/genetics/iyae077 PMID: 38733622. | WB-STRAIN:WBStrain00062208 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:38 | 0 | ||||||
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otIs669 V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062209 | Caenorhabditis elegans | otIs669 V. | Derived by out-crossing parental strain OH15262 an additional six times to N2. Out-crossed strain AML318 seems healthier than parental strain when maintaining long-term under normal conditions (AML observed an increase in male and sterile progeny in parental strain in successive generations.) otIs669 [UPN::NLS::TagRFP-T + acr-5::NLS::mTagBFP2::H2B + flp-1::NLS::mTagBFP2::H2B + flp-6::NLS::mTagBFP2::H2B + flp-18::NLS::mTagBFP2::H2B + flp-19::NLS::mTagBFP2::H2B + flp-26::NLS::mTagBFP2::H2B + gcy-18::NLS::mTagBFP2::H2B + ggr-3::NLS::mTagBFP2::H2B + lim-4::NLS::mTagBFP2::H2B + pdfr-1::NLS::mTagBFP2::H2B + srab-20::NLS::mTagBFP2::H2B + unc-25::NLS::mTagBFP2::H2B + cho-1::NLS::CyOFP1::H2B + flp-13::NLS::CyOFP1::H2B + flp-20::NLS::CyOFP1::H2B + gcy-36::NLS::CyOFP1::H2B + gpa-1::NLS::CyOFP1::H2B + nlp-12::NLS::CyOFP1::H2B + nmr-1::NLS::CyOFP1::H2B + ocr-1::NLS::CyOFP1::H2B + osm-9::NLS::CyOFP1::H2B + srh-79::NLS::CyOFP1::H2B + sri-1::NLS::CyOFP1::H2B + srsx-3::NLS::CyOFP1::H2B + unc-8::NLS::CyOFP1::H2B + acr-2::NLS::mNeptune2.5 + ceh-2::NLS::mNeptune2.5 + dat-1::NLS::mNeptune2.5 + dhc-3::NLS::mNeptune2.5 + eat-4::NLS::mNeptune2.5 + flp-3::NLS::mNeptune2.5 + gcy-35::NLS::mNeptune2.5 + glr-1::NLS::mNeptune2.5 + gcy-21::NLS::CyOFP1::H2B::T2A::NLS::mTagBFP2::H2B + klp-6::NLS::mNeptune2.5::T2A::NLS::CyOFP1::H2B + lim-6::NLS::mNeptune2.5::T2A::NLS::CyOFP1::H2B + mbr-1::NLS::mNeptune2.5::T2A::NLS::mTagBFP2::H2B + mec-3::NLS::CyOFP1::H2B::T2A::NLS::mTagBFP2::H2B + odr-1::NLS::mNeptune2.5::T2A::NLS::mTagBFP2::H2B + srab-20::NLS::mNeptune2.5::T2A::NLS::mTagBFP2::H2B] V. UPN (Ultra Pan-Neuronal) promoter contains four short pan-neuronal promoters fused together (unc-11::rgef-1::ehs-1::ric-19). NeuroPAL (Neuronal Polychromatic Atlas of Landmarks) transgene used to resolve unique neural identities in whole-brain images. Reference: Yemini E, et al. Cell. 2021 Jan 7;184(1):272-288.e11. PMID: 33378642. | WB-STRAIN:WBStrain00062209 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:38 | 0 | ||||||
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rrIs62[pie-1p::his-15::gfp::3xmir-51::tbb-2 3UTR]II; unc-119(+)II; daf-2(e1370) aak-1(tm1944) unc-119(ed3)III; aak-2(ok524)X; oxEx1678 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062161 | Caenorhabditis elegans | rrIs62[pie-1p::his-15::gfp::3xmir-51::tbb-2 3UTR]II; unc-119(+)II; daf-2(e1370) aak-1(tm1944) unc-119(ed3)III; aak-2(ok524)X; oxEx1678 | EMPTY | WB-STRAIN:WBStrain00062161 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-09-05 04:59:37 | 0 | |||||
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daf-2(e1370)III; rrEx875[nhx-2p::gfp::rab-7; rol-6] Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062162 | Caenorhabditis elegans | daf-2(e1370)III; rrEx875[nhx-2p::gfp::rab-7; rol-6] | EMPTY | WB-STRAIN:WBStrain00062162 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-09-05 04:59:37 | 0 | |||||
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rrIs62[pie-1p::his-15::gfp::3xmir-51::tbb-2 3UTR]II; daf-2(e1370)III; mir-51(n4473)IV; rrEx878[rgef-1p::mir-51 scrambled; rol-6] Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062165 | Caenorhabditis elegans | rrIs62[pie-1p::his-15::gfp::3xmir-51::tbb-2 3UTR]II; daf-2(e1370)III; mir-51(n4473)IV; rrEx878[rgef-1p::mir-51 scrambled; rol-6] | EMPTY | WB-STRAIN:WBStrain00062165 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-09-05 04:59:37 | 0 | |||||
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daf-2(e1370) aak-1(tm1944)III; aak-2(ok523)X; rrEx879[rgef-1p::HA::gfp::rab-7; sur-5p::NeoR; rgef-1p::ollas::tsp-7; rgef-1p::3xFLAG::mKate::alg-1; rol-6] Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062166 | Caenorhabditis elegans | daf-2(e1370) aak-1(tm1944)III; aak-2(ok523)X; rrEx879[rgef-1p::HA::gfp::rab-7; sur-5p::NeoR; rgef-1p::ollas::tsp-7; rgef-1p::3xFLAG::mKate::alg-1; rol-6] | EMPTY | WB-STRAIN:WBStrain00062166 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-09-05 04:59:37 | 0 | |||||
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daf-2(e1370) aak-1(tm1944)III; aak-2(ok523)X; rrEx876[rgef-1p::mir-51; rol-6] Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062163 | Caenorhabditis elegans | daf-2(e1370) aak-1(tm1944)III; aak-2(ok523)X; rrEx876[rgef-1p::mir-51; rol-6] | EMPTY | WB-STRAIN:WBStrain00062163 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-09-05 04:59:37 | 0 | |||||
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daf-2(e1370) aak-1(tm1944)III; tbc-7(rr166) aak-2(ok524)X; rrEx894[unc-17p::tbc-7] line 1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062167 | Caenorhabditis elegans | daf-2(e1370) aak-1(tm1944)III; tbc-7(rr166) aak-2(ok524)X; rrEx894[unc-17p::tbc-7] line 1 | EMPTY | WB-STRAIN:WBStrain00062167 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-09-05 04:59:37 | 0 | |||||
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Caenorhabditis elegans with no genotype reported Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062200 | Caenorhabditis elegans | EMPTY | [2025-04-09T22:17:08.832Z WBPerson712] New Strain: DUP297 glh-1(sam174[glh-1::T2A::sGFP2(1-10)::M3::GARR-1NtermRGG+NLS]) I; garr-1(sam179[garr-1::wrmScarlet(1-11)]) IV Paper_evidence: WBPaper00067989 | WB-STRAIN:WBStrain00062200 | WormBase (WB) | WB | unknown | PMID:40192507 | 2026-09-05 04:59:38 | 0 | |||||
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Caenorhabditis elegans with no genotype reported Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062201 | Caenorhabditis elegans | EMPTY | [2025-04-09T22:18:04.23Z WBPerson712] New Strain: DUP305 glh-1 (sam182[glh-1::T2A::sGFP2(1-11)::NLS]) I Paper_evidence: WBPaper00067989 | WB-STRAIN:WBStrain00062201 | WormBase (WB) | WB | unknown | PMID:40192507 | 2026-09-05 04:59:38 | 0 | |||||
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Caenorhabditis elegans with no genotype reported Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062205 | Caenorhabditis elegans | EMPTY | [2025-04-10T17:37:41.954Z WBPerson557] New Strain: Strain : PVX69 Reference : WBPaper00067987 Genotype : klp-4(ok3537), atat-2(ok2415) Remark : Strain made via cross of RB2546 and RB1869 Remark : DOI 10.17912/micropub.biology.001536 Species Caenorhabditis elegans | WB-STRAIN:WBStrain00062205 | WormBase (WB) | WB | unknown | PMID:40291054 | 2026-09-05 04:59:38 | 0 | |||||
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daf-2(e1370) aak-1(tm1944)III; aak-2(ok523)X; rrEx838[rgef-1p::HA::gfp::rab-7; sur-5p::NeoR; rgef-1p::ollas::tsp-7; rgef-1p::alg-2::3xFLAG::mKate; rol-6] Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062154 | Caenorhabditis elegans | daf-2(e1370) aak-1(tm1944)III; aak-2(ok523)X; rrEx838[rgef-1p::HA::gfp::rab-7; sur-5p::NeoR; rgef-1p::ollas::tsp-7; rgef-1p::alg-2::3xFLAG::mKate; rol-6] | EMPTY | WB-STRAIN:WBStrain00062154 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-09-05 04:59:37 | 0 | |||||
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daf-2(e1370)III; rrEx767[rgef-1p::HA::gfp::rab-7; sur-5p::NeoR; rgef-1p::ollas::tsp-7; rgef-1p::alg-2::3xFLAG::mKate; rol-6] Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062153 | Caenorhabditis elegans | daf-2(e1370)III; rrEx767[rgef-1p::HA::gfp::rab-7; sur-5p::NeoR; rgef-1p::ollas::tsp-7; rgef-1p::alg-2::3xFLAG::mKate; rol-6] | EMPTY | WB-STRAIN:WBStrain00062153 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-09-05 04:59:37 | 0 | |||||
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rrIs62[pie-1p::his-15::gfp::3xmir-51::tbb-2 3UTR]II; unc-119(+)II; daf-2(e1370) unc-119(ed3)III; oxEx1678 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062158 | Caenorhabditis elegans | rrIs62[pie-1p::his-15::gfp::3xmir-51::tbb-2 3UTR]II; unc-119(+)II; daf-2(e1370) unc-119(ed3)III; oxEx1678 | EMPTY | WB-STRAIN:WBStrain00062158 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-09-05 04:59:37 | 0 |
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Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
