Searching the RRID Resource Information Network
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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
karshi2586Tg Resource Report Resource Website |
RRID:ZIRC_ZL9351 | Danio rerio | Transgenic Insertion | eye, gut, head, heart, liver, pericardium, trunk eye, gut (all 7) | karshi2586Tg | hi2586Tg | ZL9351 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | ||||
|
b3gat3hi307Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL496 | Danio rerio | Transgenic Insertion | ceratohyal cartilage, chondroitin sulfate biosynthetic process, chondroitin sulfate proteoglycan biosynthetic process, cleithrum, cranial cartilage, endochondral bone morphogenesis, glycosaminoglycan metabolic process, head, heparan sulfate proteoglycan biosynthetic process, mandibular arch skeleton, Meckel''s cartilage, opercle, ossification, pharyngeal arch 3-7, pharyngeal arch 3-7 skeleton, pharyngeal arch cartilage, sulfation, whole organism ceratohyal cartilage, chondroitin sulfate biosynthetic process (all 18) | b3gat3hi307Tg/+ (AB) | hi307Tg | ZL496 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | |||
|
mcm2hi3205Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1072 | Danio rerio | Transgenic Insertion | brain, central nervous system, endocrine pancreas, eye, gut, head, heart, Kupffer''s vesicle, lateral plate mesoderm, liver, pharyngeal arch 3-7, pronephric duct, retina, thymus, trunk, whole organism brain, central nervous system (all 16) | mcm2hi3205Tg/+ (AB) | hi3205Tg | ZL1072 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:06 | 0 | |||
|
rnf113ahi3013Tg Resource Report Resource Website |
RRID:ZIRC_ZL9635 | Danio rerio | Transgenic Insertion | anatomical system, eye, gut, head, heart, liver, pericardium, trunk, whole organism anatomical system, eye (all 9) | rnf113ahi3013Tg | hi3013Tg | ZL9635 | Zebrafish Lines at ZIRC | ZIRC | frozen * | 2026-09-05 05:49:05 | 0 | ||||
|
epcamhi2836Tg Resource Report Resource Website |
RRID:ZIRC_ZL9347 | Danio rerio | Transgenic Insertion | apical junction assembly, apoptotic process, cell population proliferation, epiboly involved in gastrulation with mouth forming second, EVL, hepatocyte, keratinocyte, liver, liver development, otic vesicle, otolith, posterior lateral line neuromast, posterior lateral line neuromast deposition, tail bud, yolk apical junction assembly, apoptotic process (all 15) | epcamhi2836Tg | hi2836Tg | ZL9347 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | ||||
|
plrg1hi3174aTg Resource Report Resource Website 1+ mentions |
RRID:ZIRC_ZL9620 | Danio rerio | Transgenic Insertion | apoptotic process, central nervous system, embryo development, extension, head, nervous system, post-vent region, programmed cell death, trunk, whole organism, yolk apoptotic process, central nervous system (all 11) | plrg1hi3174aTg | hi3174aTg | ZL9620 | Zebrafish Lines at ZIRC | ZIRC | frozen * | 2026-09-05 05:49:06 | 1 | ||||
|
ppp1r12ahi2653Tg Resource Report Resource Website |
RRID:ZIRC_ZL9860 | Danio rerio | Transgenic Insertion | actin filament bundle distribution, anterior axial hypoblast, anterior commissure, anterior pancreatic bud, brain, CaP motoneuron, cell migration involved in mesendoderm migration, cell population proliferation, convergent extension involved in gastrulation, cranial nerve II, cytoskeleton organization, endodermal cell, exocrine pancreas, forebrain, gut, head, heart, hepatocyte, hindbrain, lateral plate mesoderm, liver, liver development, liver primordium, midbrain hindbrain boundary, midbrain hindbrain boundary constriction, midbrain-hindbrain boundary morphogenesis, motor neuron, neuroepithelial cell, notochord, pericardium, peripheral neuron, postoptic commissure, post-vent region, prechordal plate formation, radial glial cell, somite, spinal cord, trunk, ventricular system, whole organism, yolk actin filament bundle distribution, anterior axial hypoblast (all 41) | ppp1r12ahi2653Tg | hi2653Tg | ZL9860 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | ||||
|
gnl3hi299Tg Resource Report Resource Website |
RRID:ZIRC_ZL9629 | Danio rerio | Transgenic Insertion | amacrine cell, anterior commissure, apoptotic process, cranial nerve II, exonucleolytic trimming to generate mature 3''-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA), eye, forebrain, forebrain ventricle, fourth ventricle, gut, head, heart, hindbrain, integument, liver, midbrain hindbrain boundary, neuron differentiation, optic tectum, pericardium, posterior chamber swim bladder, postoptic commissure, post-vent region, radial glial cell, regulation of mitotic cell cycle, embryonic, retina development in camera-type eye, retinal ganglion cell layer, retinal inner nuclear layer, retinal neural layer, retinal outer nuclear layer, ribosome biogenesis, spinal cord, telencephalon, whole organism, yolk amacrine cell, anterior commissure (all 34) | gnl3hi299Tg | hi299Tg | ZL9629 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | ||||
|
sephhi2737Tg Resource Report Resource Website |
RRID:ZIRC_ZL2036 | Danio rerio | Transgenic Insertion | anatomical system, cartilage development, digestive tract development, DNA damage response, signal transduction by p53 class mediator, embryonic viscerocranium morphogenesis, eye, gut, head, heart, hepatocyte, inflammatory response, intestinal epithelial cell development, liver, liver development, pancreas, pancreas development, pericardium, response to oxidative stress, swim bladder, whole organism anatomical system, cartilage development (all 20) | sephhi2737Tg | hi2737Tg | ZL2036 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | ||||
|
nifkhi2827bTg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL852 | Danio rerio | Transgenic Insertion | brain, central nervous system, eye, fourth ventricle, gut, head, liver, midbrain hindbrain boundary, trunk, whole organism brain, central nervous system (all 10) | nifkhi2827bTg/+ (AB) | hi2827bTg | ZL852 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | |||
|
eya1hi2933Tg/+ (AB) Resource Report Resource Website |
RRID:ZIRC_ZL1187 | Danio rerio | Transgenic Insertion | adenohypophysis, adenohypophysis development, adrenocorticotropic hormone secreting cell, anatomical system, anterior crista, anterior crista primordium, brain, cranial nerve VIII, gut, hair cell, hair cell anterior macula, hair cell posterior macula, head, hypophysis, inner ear, lateral crista, lateral crista primordium, lateral line, liver, locomotory behavior, macula, mandibular arch skeleton, mandibular muscle, melanocyte stimulating hormone secreting cell, neurohypophysis, opercular lateral line neuromast, otic vesicle, otic vesicle formation, otolith, peptide hormone secreting cell, pharyngeal arch 3-7 skeleton, posterior crista, posterior crista primordium, posterior lateral line neuromast, posterior lateral line primordium, prolactin secreting cell, semicircular canal, semicircular canal morphogenesis, sensory system, somatotropin secreting cell, thyroid stimulating hormone secreting cell, whole organism adenohypophysis, adenohypophysis development (all 42) | eya1hi2933Tg/+ (AB) | hi2933Tg | ZL1187 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | |||
|
snw1hi296bTg Resource Report Resource Website |
RRID:ZIRC_ZL3128 | Danio rerio | Transgenic Insertion | BMP signaling pathway, brain, central nervous system, head, neural crest cell, neural crest cell differentiation, neural crest formation, whole organism BMP signaling pathway, brain (all 8) | snw1hi296bTg | hi296bTg | ZL3128 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | ||||
|
rpl35hi258Tg Resource Report Resource Website |
RRID:ZIRC_ZL9698 | Danio rerio | Transgenic Insertion | ball, brain, central nervous system, embryo development, extension, eye, fin, forebrain, fourth ventricle, head, hindbrain, midbrain hindbrain boundary, nervous system, nucleate erythrocyte, optic tectum, otic placode, otolith organ, peripheral nervous system, post-vent region, retina, trunk, whole organism, yolk ball, brain (all 23) | rpl35hi258Tg | hi258Tg | ZL9698 | Zebrafish Lines at ZIRC | ZIRC | frozen * | 2026-09-05 05:49:05 | 0 | ||||
|
wdr55hi2786bTg Resource Report Resource Website |
RRID:ZIRC_ZL3193 | Danio rerio | Transgenic Insertion | anatomical system, eye, gut, head, pharyngeal arch, swim bladder, thymus, trunk, whole organism anatomical system, eye (all 9) | wdr55hi2786bTg | hi2786bTg | ZL3193 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | ||||
|
prkcihi3208Tg Resource Report Resource Website |
RRID:ZIRC_ZL9574 | Danio rerio | Transgenic Insertion | amacrine cell, anatomical system, atrium, blood circulation, brain, brain development, camera-type eye photoreceptor cell differentiation, cardiac ventricle, central canal, ceratobranchial 5 bone, cornea, corneal epithelial cell, corneal epithelium, corneal stroma, dorsal motor nucleus of vagus nerve development, dorsolateral motor nucleus of vagal nerve, eye, eye photoreceptor cell, eye pigmentation, fourth ventricle, head, heart, heart morphogenesis, liver, maintenance of epithelial cell apical/basal polarity, melanocyte, melanocyte differentiation, mitotic cell cycle, nervous system, neuroblast, neuroblast development, neuroepithelial cell, nuclear migration, pericardium, peridermal cell, photoreceptor cell morphogenesis, pigmented epithelial cell, podocyte cell migration, post-vent region, pronephric podocyte, pronephric proximal convoluted tubule, pronephric proximal tubule morphogenesis, pronephros, retina, retina layer formation, retinal ganglion cell layer, retinal pigmented epithelium, spinal cord, tube formation, ventricular system, whole organism, yolk amacrine cell, anatomical system (all 52) | prkcihi3208Tg | hi3208Tg | ZL9574 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:06 | 0 | ||||
|
wdr12hi3120Tg Resource Report Resource Website |
RRID:ZIRC_ZL2022 | Danio rerio | Transgenic Insertion | anatomical system, eye, gut, head, liver, pericardium anatomical system, eye (all 6) | wdr12hi3120Tg | hi3120Tg | ZL2022 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | ||||
|
rad21ahi2529Tg/+ (AB) Resource Report Resource Website 1+ mentions |
RRID:ZIRC_ZL1215 | Danio rerio | Transgenic Insertion | atrioventricular valve, atrium, blood circulation, brain, cardiac neural crest, cardiac ventricle, cell, cell death, cell population proliferation, central nervous system, cranial cartilage, developmental growth, embryo development, enteric neuron, epidermis, eye, gut, head, heart, heart contraction, heart looping, melanocyte, mitotic cell cycle, mitotic M phase, mitotic sister chromatid cohesion, neural tube, neuron development, nucleate erythrocyte, pericardium, pharyngeal arch, post-vent region, regulation of transcription by RNA polymerase II, Rohon-Beard neuron, rRNA transcription, translation, trigeminal ganglion, trunk, ventriculo bulbo valve, whole organism atrioventricular valve, atrium (all 39) | rad21ahi2529Tg/+ (AB) | hi2529Tg | ZL1215 | AB | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 2 | |||
|
ddx56hi3073Tg Resource Report Resource Website |
RRID:ZIRC_ZL9686 | Danio rerio | Transgenic Insertion | brain, extension, eye, forebrain, fourth ventricle, head, pericardium, yolk brain, extension (all 8) | ddx56hi3073Tg | hi3073Tg | ZL9686 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | ||||
|
wdr75hi2404Tg Resource Report Resource Website |
RRID:ZIRC_ZL9727 | Danio rerio | Transgenic Insertion | brain, central nervous system, eye, gut, head, midbrain hindbrain boundary brain, central nervous system (all 6) | wdr75hi2404Tg | hi2404Tg | ZL9727 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 | ||||
|
lamc1hi2557Tg Resource Report Resource Website |
RRID:ZIRC_ZL9603 | Danio rerio | Transgenic Insertion | actin filament organization, anterior/posterior axon guidance, axon extension, axon guidance, brain, brainstem and spinal white matter, cranial nerve II, detection of light stimulus involved in visual perception, extension, eye, fast muscle cell, fast muscle myoblast, forebrain midbrain boundary, forebrain ventricle, fourth ventricle, head, heart, hindbrain, intersegmental vessel, lens, mandibular arch skeleton, Mauthner neuron, midbrain hindbrain boundary, midbrain hindbrain boundary constriction, midbrain-hindbrain boundary morphogenesis, muscle cell migration, muscle organ morphogenesis, muscle tissue development, myotome, nervous system, neuroepithelial cell, notochord, notochord development, notochord formation, notochord morphogenesis, optokinetic behavior, pericardium, post-vent region, retina, retinal ganglion cell, retinal ganglion cell layer, retinal photoreceptor layer, sensory system, skeletal muscle fiber development, slow muscle cell, somite, spermatogenesis, tectal ventricle, testis, trunk, whole organism actin filament organization, anterior/posterior axon guidance (all 51) | lamc1hi2557Tg | hi2557Tg | ZL9603 | Zebrafish Lines at ZIRC | ZIRC | frozen | 2026-09-05 05:49:05 | 0 |
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Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
