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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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SS-Adora2aem3Mcwi Resource Report Resource Website |
RRID:RGD_10054287 | Rattus norvegicus | CRISPR/Cas9 system was used to introduce a mutation in the Adora2a gene of SS/JrHsdMcwi rat embryos. The resulting mutation is a 98-bp deletion in the Adora2a gene. Contact MCW rat distribution at [email protected] | 10054287 | mutant | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Sperm (as of 2017-01-26) | 10054287 | 2026-07-25 12:43:00 | 0 | |||||
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SS.BN-(D13Rat25-rs106935835)-Btg2em11Mcwi Resource Report Resource Website |
RRID:RGD_10054299 | Rattus norvegicus | CRISPR/Cas9 system was used to introduce a 16-bp deletion in the Btg2 gene of SS.BN-(D13Rat25-rs106935835)/Mcwi rat embryos. Contact MCW rat distribution at [email protected] | 10054299 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2021-11-03) | 10054299 | 2026-07-25 12:43:00 | 0 | |||||
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WIC-Dmdem3Kykn Resource Report Resource Website |
RRID:RGD_11040985 | Rattus norvegicus | By CRISPR/Cas9 system, mutation was introduced in dystrophin (Dmd) gene of Wistar-Imamichi rat: Deletion of exon3 to exon16 (a part of intron 3 remain). This strain died out in 2015. National BioResource Project for the Rat in Japan | 11040985 | mutant | Rat Genome Database (RGD) | RGD | Extinct (as of 2017-05-02) | 11040985 | 2026-07-25 12:43:01 | 0 | |||||
|
SS-Shc1em4Mcwi Resource Report Resource Website |
RRID:RGD_11553914 | Rattus norvegicus | ZFN system was used to introduce a mutation in the Shc1 gene of SS/JrHsdMcwi rat embryos. The resulting mutation is a 13-bp deletion in Exon 2 of theShc1 gene. Contact MCW rat distribution at [email protected] | 11553914 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2017-01-26) | 11553914 | 2026-07-25 12:43:02 | 0 | |||||
|
WTC-furue/Kyo Resource Report Resource Website |
RRID:RGD_11040918 | Rattus norvegicus |
WTC-furue rat was found in a colony of WTC.ZI-Atrn |
11040918 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm | 11040918 | 2026-07-25 12:43:01 | 0 | |||||
|
SHR-Ndufc2em1Mcwi-/+ Resource Report Resource Website |
RRID:RGD_11040519 | Rattus norvegicus | ZFN mutant founders were backcrossed with SHR/NCrl to get heterozygous offsprings which were intercrossed and offsprings maintained as homozygous and heterozygous breeders. | 11040519 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 11040519 | 2026-07-25 12:43:01 | 0 | |||||
|
F344-Zeb2em1Kyo Resource Report Resource Website |
RRID:RGD_11040916 | Rattus norvegicus | Zinc-finger nucleases (ZFNs) method taregting exon 5 of Zeb2 gene (AGCCAAAGCTTGCCTCCA and GACTACTGACTCAAG) was used; This strain has a 5-bp deletion (cagag) and a 2-bp insertion (tc) in exon7 of Nrf2 gene, resulting in a deletion of Glutamine(Q)541. Background strain: F344/Stm National BioResource Project for the Rat in Japan | 11040916 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm | 11040916 | 2026-07-25 12:43:01 | 0 | |||||
|
SS-Shc1em3Mcwi Resource Report Resource Website |
RRID:RGD_11553904 | Rattus norvegicus | ZFN system was used to introduce a mutation in the Shc1 gene of SS/JrHsdMcwi rat embryos. The resulting mutation is a 27-bp deletion in Exon 1 of the Shc1 gene. Contact MCW rat distribution at [email protected] | 11553904 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2017-01-26) | 11553904 | 2026-07-25 12:43:02 | 0 | |||||
|
F344-Prkdcem2KyoIl2rgem6Kyo Resource Report Resource Website |
RRID:RGD_11040948 | Rattus norvegicus | This strain was established by Zinc-finger nucleases (ZFNs) method taregting rat Prkdc gene (227-bp deletion) and Il2rg gene (332-bp deletion). Background strain: F344/Stm National BioResource Project for the Rat in Japan | 11040948 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2017-06-08) | 11040948 | 2026-07-25 12:43:01 | 0 | |||||
|
SS-Tpcn2em1Mcwi Resource Report Resource Website 1+ mentions |
RRID:RGD_11553894 | Rattus norvegicus | ZFN system was used to introduce a mutation in the Tpcn2 gene of SS/JrHsdMcwi rat embryos. The resulting mutation is a 9-bp deletion in Exon 4 of theTpcn2 gene. Contact MCW rat distribution at [email protected] | 11553894 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2021-11-03) | 11553894 | 2026-07-25 12:43:01 | 1 | |||||
|
LEA-Tp53tm1(AmCyan1)Ncco Resource Report Resource Website 1+ mentions |
RRID:RGD_11040954 | Rattus norvegicus | LEA rats were provided from Kyoto Bioresource Center in 2006. Then LEA rat ES cells having Oct4-Venus gene and Oct4-Venus Tg rat strain (LEA-Tg(Pou5f1-YFP*)3Ncco) were established. National BioResource Project for the Rat in Japan | 11040954 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Embryo | 11040954 | 2026-07-25 12:43:01 | 1 | |||||
|
WKY-Slc39a12em77Tja Resource Report Resource Website |
RRID:RGD_10401843 | Rattus norvegicus | This strain was produced by injecting ZFNs targeted sequence into WKY/Cruk rat embryos. The resulting mutation 77 has a stop codon, 15 amino acids from the ZFN-binding site, that resulted in a 490 amino acids (54 kDa) truncated protein, 198 amino acids smaller than the WT protein. | 10401843 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 10401843 | 2026-07-25 12:43:01 | 0 | |||||
|
WDF-Leprm1Rll Resource Report Resource Website |
RRID:RGD_9835403 | Rattus norvegicus | The WDF colony at Vassar College (WDF/Vc) carry the Leprm1Rll allele that has substitution of a nucleotide at 880 (A-C) results in Gln-Pro at position 269 | 9835403 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 9835403 | 2026-07-25 12:43:01 | 0 | |||||
|
SD-F8em1Sage-/-/Novo Resource Report Resource Website 1+ mentions |
RRID:RGD_11531091 | Rattus norvegicus | The homozygous F8 mutant rats were produced by intercrossing the heterozygous ZFN mutants (SD-F8em1Sage+/-/Novo) to produce homozygous and heterozygous offspring. Genotype of the homozygous offspring was confirmed by PCR amplification of the deletion fragment which caused a premature translation stop. | 11531091 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 11531091 | 2026-07-25 12:43:01 | 1 | |||||
|
F344-TyrCKitH/Kyo Resource Report Resource Website |
RRID:RGD_11040971 | Rattus norvegicus | 1) point mutation in the exon 2 (896G>A, p.R229H) of Tyrosinase (Tyr) gene (albino phenotype) and 2) retrotransposon insertion (7-bp) in kit gene (hooded phenotype) were targeted by CRISPR/Cas9 system using ssODN. The rat coat colour phenotype was changed from white to black. Background strain: F344/Stm National BioResource Project for the Rat in Japan | 11040971 | mutant | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Sperm (as of 2017-07-17) | 11040971 | 2026-07-25 12:43:01 | 0 | |||||
|
SS-Adora2aem5Mcwi Resource Report Resource Website |
RRID:RGD_10059573 | Rattus norvegicus | CRISPR/Cas9 system was used to introduce a mutation in the Adora2a gene of SS/JrHsdMcwi rat embryos. The resulting mutation is a 7-bp deletion and 5-bp insertion in the Adora2a gene. Contact MCW rat distribution at [email protected] | 10059573 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2017-01-26) | 10059573 | 2026-07-25 12:43:01 | 0 | |||||
|
WI;WDB-Kiss1tm1Nips Resource Report Resource Website |
RRID:RGD_10059570 | Rattus norvegicus | This strain was made by electroporation of WDB/Nips-ES1/Nips (RGD ID:10054010) embryonic stem cells with a targeting vector. Homologous recombination of the rKiss1 targeting construct (13.4kb) result in the deletion of 2.5 kb of the Kiss1 locus, consisting of 88 bp of the first coding exon, all of the 2.0-kb downstream intron, and 319 bp of the second coding exon, covering all of the coding region of this exon including the key active region of the processed peptide. Founder animals were backcrossed to Crlj:WI. | 10059570 | mutant | Rat Genome Database (RGD) | RGD | Unknown | 10059570 | 2026-07-25 12:43:01 | 0 | |||||
|
WKY-Sik2em4Mcwi Resource Report Resource Website |
RRID:RGD_10059576 | Rattus norvegicus | CRISPR/Cas9 system was used to introduce a mutation in the Sik2 gene of WKY/NCrl rat embryos. The resulting mutation is a 4-bp deletion in exon 4 of the Sik2 gene. Contact MCW rat distribution at [email protected] | 10059576 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2021-11-03) | 10059576 | 2026-07-25 12:43:01 | 0 | |||||
|
F344-AsipATyrCKitH/Kyo Resource Report Resource Website |
RRID:RGD_11040974 | Rattus norvegicus | 1) point mutation in the exon 2 of Tyrosinase (Tyr) gene (albino phenotype), 2) 19-bp deletion in Asip gene (Agouti phenotype), and 3) retrotransposon insertion (7-bp) in kit gene (hooded phenotype) were targeted by CRISPR/Cas9 system using ssODN. The rat coat colour phenotype was changed from white to Agouti. Background strain: F344/Stm National BioResource Project for the Rat in Japan | 11040974 | mutant | Rat Genome Database (RGD) | RGD | Live Animals; Cryopreserved Sperm | 11040974 | 2026-07-25 12:43:01 | 0 | |||||
|
F344-Bscl2m1Kyo Resource Report Resource Website |
RRID:RGD_11040962 | Rattus norvegicus | T239A mutation was found by screening of 4608DNA sample from ENU mutagenesis library KURMA. This strain has a T239A (L80X) nonsense mutation in Bscl2 gene. National BioResource Project for the Rat in Japan | 11040962 | mutant | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2019-01-09) | 11040962 | 2026-07-25 12:43:01 | 0 |
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Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
