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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1357195
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1357195
Notes: This congenic strain is derived by introgressing a desired region of chr 10 from MNS to the SS/Jr recipient.
Proper citation: RRID:RGD_1357195 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1357196
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1357196
Notes: This congenic was generated by the marker-assisted protocol where a segment of BBDR/Wor is transferred to WF background and the animals were screened using microsatellite markers.
Proper citation: RRID:RGD_1357196 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1359009
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1359009
Notes: Congenic strains were constructed by repeated backcross of an (SHR/NCrl x WKY/NCrl)F1 to the WKY/Crl recipient strain with selection for chromosome 2 SHR markers
Proper citation: RRID:RGD_1359009 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1359005
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1359005
Notes: This congenic substrain was constructed by repeated backcrossing the congenic strain SHR.WKY-(D2Rat10-D2Mgh13) to parental strain SHR/NCrl
Proper citation: RRID:RGD_1359005 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1559032
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1559032
Notes: This congenic substrain contains a LEW/Crlc chromosome 17 segment transferred to the SS/Jr recipient strain; derived by crossing congenic strain SS.LEW-(D17Rat65-Prl) with SS/Jr, F2 animals were screened with D17Rat65 and Prl to identify regions with crossovers within this chromosome 17 segment
Proper citation: RRID:RGD_1559032 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1559033
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1559033
Notes: This congenic strain contains a LEW/Crlc chromosome 17 segment transferred to the SS/Jr recipient strain
Proper citation: RRID:RGD_1559033 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1599769
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1599769
Notes: Male COP/OlaHsd were crossed with female DA/OlaHsd then the F1 males were backcrossed to COP females. Male progeny containing the fewest number of DA-alleles were backcrossed to female COP. These males were backcrossed to female COP.
Proper citation: RRID:RGD_1599769 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1579894
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1579894
Notes: A sub congenic strain derived from the progenitor strain SS.LEW-(D10Rat119-D10Mgh1)/Ayd.
Proper citation: RRID:RGD_1579894 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1599764
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1599764
Notes: Male COP/OlaHsd were crossed with female DA/OlaHsd then the F1 males were backcrossed to COP females. Male progeny containing the fewest number of DA-alleles were backcrossed to female COP. These males were backcrossed to female COP.
Proper citation: RRID:RGD_1599764 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1579902
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1579902
Notes: This congenic strain contains a LEW chromosome 5 segment transferred to the Dahl salt sensitive background. The strain was originally developed by Drs. Rapp and M. R. Garrett at the Medical University of Ohio and has also been maintained by brother-sister mating at the Medical College of Wisconsin for more than 20 generations.
Proper citation: RRID:RGD_1579902 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1579904
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1579904
Notes: A congenic strain derived from the progenitor strains SS and SR.
Proper citation: RRID:RGD_1579904 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1579905
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1579905
Notes: Congenic strain derived from parental strains SS and SR.
Proper citation: RRID:RGD_1579905 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1582195
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1582195
Notes: FHH-1BN/Mcwi was backcrossed with FHH/EurMcwi to generate these rats.
Proper citation: RRID:RGD_1582195 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1579699
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1579699
Notes: This congenic strain contains a region of WKHA/Cfd chromosome 5 transferred to the WKY/Cfd strain background
Proper citation: RRID:RGD_1579699 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1600342
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1600342
Notes: This is a congenic substrain derived by intercrossing female F344/Crl and male F344.GK-(D1Arb42a-D1Rat90)/Swe. F2 progeny carried the homozygous GK/Swe genome in different segments. These were then maintained by bxs breeding.
Proper citation: RRID:RGD_1600342 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1600337
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1600337
Notes: This is a congenic substrain derived by intercrossing female F344/Crl and male F344.GK-(D1Arb42a-D1Rat90)/Swe. F2 progeny carried the homozygous GK/Swe genome in different segments. These were then maintained by bxs breeding.
Proper citation: RRID:RGD_1600337 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1598804
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1598804
Notes: GHS females were crossed with WKY males and the heterozygous males were backcrossed to WKY females for 10 generations this resulted in introgressing a 100 cM region of chr 1 which contained the Hc1 QTL
Proper citation: RRID:RGD_1598804 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1600338
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1600338
Notes: Segment of chr 12 was introgressed from normotensive F344/Snk into SHR/Snk by the speed congenic technique
Proper citation: RRID:RGD_1600338 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1598800
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1598800
Notes: Congenic strain which was generated using the speed congenic strategy by backcrossing ACI/Eur and FHH/Eur parental strains. Rf1 QTL region of chr 1 is introgressed in this strain.
Proper citation: RRID:RGD_1598800 Copy
https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1358177
Source Database: Rat Genome Database (RGD)
Genetic Background: congenic
Affected Genes:
Genomic Alteration:
Availability: Unknown
References:
Synonyms:
Alternate IDs: 1358177
Notes: Congenic strain was created by backcrossing congenic strain SS.MNS-(D2Mit6-Adh1)/Lt strain into the parental Dahl Salt-sensitive (SS) strain.
Proper citation: RRID:RGD_1358177 Copy
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Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
