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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
SHR.BN-(D1Mit3-Igf2)/Ipcv Resource Report Resource Website |
RRID:RGD_628908 | Rattus norvegicus | Segment of chromosome 1 from the normotensive BN/Cr was transferred to SHR. After 10 generations of backcrossing to SHR, the differential segment was fixed with the flanking markers.These were maintained in the homozygous state by brother x sister mating. | 628908 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 628908 | 2026-07-25 12:42:27 | 0 | |||||
|
OLETF.BN-(D1Rat76-D1Rat459)/Got Resource Report Resource Website |
RRID:RGD_734528 | Rattus norvegicus | Female OLETF/Got rats were crossed with male BN rats. The F1 were backcrossed to OLETF to produce the BC1. Selective males from BC1 were backcrossed to OLETF to produce successive congenic generations. | 734528 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 734528 | 2026-07-25 12:42:27 | 0 | |||||
|
SS.LEW-(D10Wox51-D10Rat27)/Ayd Resource Report Resource Website |
RRID:RGD_724572 | Rattus norvegicus | A segment of chromosome 10 was transferred from LEW into the SS background. Two congenic strains, designated S.L4 and S.L5, that were previously shown to have trapped 2 BP QTLs, were used to derive congenic substrains. The F2 rats were genotyped for markers that resided in a region of interest. Each rat was then backcrossed to an SS rat to duplicate the fragment. | 724572 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 724572 | 2026-07-25 12:42:27 | 0 | |||||
|
ACI.Cg-Du/Kyo Resource Report Resource Website |
RRID:RGD_11556280 | Rattus norvegicus | Downunder (Du) mutation is introduced into ACI/Kyo strain. National BioResource Project for the Rat in Japan | 11556280 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2016-11-10) | 11556280 | 2026-07-25 12:42:28 | 0 | |||||
|
SS.LEW-(D10Rat119-D10Rat133)/Ayd Resource Report Resource Website |
RRID:RGD_728386 | Rattus norvegicus | A segment of chromosome 10 was transferred from LEW into the SS background. Two congenic strains, designated S.L4 and S.L5, that were previously shown to have trapped 2 BP QTLs, were used to derive congenic substrains. The F2 rats were genotyped for markers that resided in a region of interest. Each rat was then backcrossed to an SS rat to duplicate the fragment. | 728386 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728386 | 2026-07-25 12:42:28 | 0 | |||||
|
WF.COP-(D2Rat2-D2M13Mit286)/Uwm Resource Report Resource Website |
RRID:RGD_728385 | Rattus norvegicus | A segment of chromosome 2 was transferred from COP into the WF background. The recombinant congenic strain, line QQ, was derived from three Mcs1-congenic lines at various backcross generations and was produced at the N10 or N12 backcross generations by intercrossing heterozygous brother and sister pairs. | 728385 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728385 | 2026-07-25 12:42:28 | 0 | |||||
|
SS.LEW-(D10Rat24-Igfbp4)/Ayd Resource Report Resource Website |
RRID:RGD_728384 | Rattus norvegicus | A segment of chromosome 10 was transferred from LEW into the SS background. Two congenic strains, designated S.L4 and S.L5, that were previously shown to have trapped 2 BP QTLs, were used to derive congenic substrains. The F2 rats were genotyped for markers that resided in a region of interest. Each rat was then backcrossed to an SS rat to duplicate the fragment. | 728384 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728384 | 2026-07-25 12:42:28 | 0 | |||||
|
SS.LEW-(D10Rat119-D10Mgh1)/Ayd Resource Report Resource Website |
RRID:RGD_728388 | Rattus norvegicus | A segment of chromosome 10 was transferred from LEW into the SS background. Two congenic strains, designated S.L4 and S.L5, that were previously shown to have trapped 2 BP QTLs, were used to derive congenic substrains. The F2 rats were genotyped for markers that resided in a region of interest. Each rat was then backcrossed to an SS rat to duplicate the fragment. | 728388 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728388 | 2026-07-25 12:42:28 | 0 | |||||
|
SS.LEW-(D10Got125-D10Rat120)/Ayd Resource Report Resource Website |
RRID:RGD_728393 | Rattus norvegicus | A segment of chromosome 10 was transferred from LEW into the SS background. Two congenic strains, designated S.L4 and S.L5, that were previously shown to have trapped 2 BP QTLs, were used to derive congenic substrains. The F2 rats were genotyped for markers that resided in a region of interest. Each rat was then backcrossed to an SS rat to duplicate the fragment. | 728393 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728393 | 2026-07-25 12:42:27 | 0 | |||||
|
LA/N-cp Resource Report Resource Website |
RRID:RGD_68063 | Rattus norvegicus | The corpulent (LA/N-cp) rat developed at the National Institutes of Health (NIH) is a congenic strain initially derived by mating a male Koletsky rat that was heterozygous for the corpulent gene (cp/ +) to a female Lister Albany/NIH (LAIN) rat. The obese homozygous (cp/cp) littermates developspontaneous insulin resistance, obesity, impaired glucose tolerance, hypertriglyceridemia and atherosclerosis. NIH Autoimmune Rat Model Repository and Development Center | 68063 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 68063 | 2026-07-25 12:42:29 | 0 | |||||
|
F344.OLETF-(D9Mgh8-D9Rat15)/Tj Resource Report Resource Website |
RRID:RGD_1302650 | Rattus norvegicus | Male OLETF was crossed with female F344. F1 were backcrossed to female F344 for 5 generations. Microsatellite-based genotyping was performed to select the best male that had the best OLETF donor genome. Once the region was fixed the resultant congenic strain was maintained by brother-sister mating.37.4 cM segment of the OLETF genome was transferred. National BioResource Project for the Rat in Japan | 1302650 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1302650 | 2026-07-25 12:42:36 | 0 | |||||
|
ACI.DA-(D10Rat2-D10Rat19)/Arb Resource Report Resource Website |
RRID:RGD_1302416 | Rattus norvegicus | A fragment from DA/OlaHsd rats is transferred to ACI/SegHsd. | 1302416 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1302416 | 2026-07-25 12:42:37 | 0 | |||||
|
BB.SHR-(D4Got41-Tacr1)/K Resource Report Resource Website |
RRID:RGD_1357980 | Rattus norvegicus | Congenic BB.LL rats were established as speed-congenics by cross of BB/OK and SHR/Mol rats and repeated backcrossing onto BB/OK rats and marker-aided selection in 1997. National BioResource Project for the Rat in Japan | 1357980 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm | 1357980 | 2026-07-25 12:42:37 | 0 | |||||
|
SS.LEW-(D8Rat56-D8Rat51)/Ayd Resource Report Resource Website |
RRID:RGD_1357189 | Rattus norvegicus | Congenic strain produced from a SS/Jr strain and a LEW/CrlBR strain purchased from Charles Rivers, Quebec, Canada | 1357189 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1357189 | 2026-07-25 12:42:37 | 0 | |||||
|
SS.LEW-(D3Mco21-D3Rat17)/Ayd Resource Report Resource Website |
RRID:RGD_1357981 | Rattus norvegicus | A sub congenic strain derived from the progenitor strain SS.LEW-(D3Rat52-D3Rat17)/Ayd | 1357981 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1357981 | 2026-07-25 12:42:37 | 0 | |||||
|
DA.E3-(D14Wox8-D14Rat64)/Rhd Resource Report Resource Website |
RRID:RGD_731195 | Rattus norvegicus | The fragment of interest is transferred from arthritis resistant E3 strain to the susceptible DA strain. | 731195 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 731195 | 2026-07-25 12:42:37 | 0 | |||||
|
SS.LEW-(D8Chm14-D8Rat16)/Ayd Resource Report Resource Website |
RRID:RGD_1357180 | Rattus norvegicus | Congenic strain produced from a SS/Jr strain and a LEW/CrlBR strain purchased from Charles Rivers, Quebec, Canada | 1357180 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1357180 | 2026-07-25 12:42:37 | 0 | |||||
|
SS.LEW-(D3Rat52-D3Rat130)/Ayd Resource Report Resource Website |
RRID:RGD_731192 | Rattus norvegicus | A sub congenic strain derived from the progenitor strain SS.LEW-(D3Rat52-D3Rat17)/Ayd | 731192 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 731192 | 2026-07-25 12:42:37 | 0 | |||||
|
SS.LEW-(D1Rat211-D1Rat18)/Mco Resource Report Resource Website |
RRID:RGD_731190 | Rattus norvegicus | A segment of chr 1 from Lewis which was obtained from Charles was introgressed into Dahl salt-sensitive strain which is an in-house colony. | 731190 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 731190 | 2026-07-25 12:42:37 | 0 | |||||
|
DA.ACI-(D10Rat2-D10Rat6) Resource Report Resource Website |
RRID:RGD_1331822 | Rattus norvegicus | DA.ACI-(D10Rat2-D10Rat29) congenic rats were backcrossed to parental DA rats and progeny were intercrossed to obtain homozygous recombinations within the desired region. | 1331822 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1331822 | 2026-07-25 12:42:37 | 0 |
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Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
