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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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BBDR.BBDP-(Zfp786-Aoc1)/Ulund Resource Report Resource Website 1+ mentions |
RRID:RGD_597830140 | Rattus norvegicus | This congenic strain was developed by intercross breeding using diabetic prone (DP) and diabetic resistant (DR) BB rats. This diabetes susceptible congenic rat strain carries Zfp786-Aoc1 genome fragment from DP and the other genomes are from DR. Since Gimap4 and Gimap5 are within Zfp786-Aoc1 region, they are of DP origin. Celiac Disease and Diabetes Unit, Lund University, Lund, Sweden | 597830140 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 597830140 | 2026-07-25 12:43:13 | 1 | |||||
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SS-Chr3BN.SS-(D3Rat164-D3Rat218)/Mcwi Resource Report Resource Website |
RRID:RGD_155791428 | Rattus norvegicus | SS/JrHsdMcwi were crossed withSS-Chr3BN.SS-(D3Rat222-D3Rat218)/Mcwi (jq strain), rats from F1 were backcrossed to SS/JrHsdMcwi to select the congenic strains carrying subregion of jq to BN chromosome 3. Contact MCW rat distribution at [email protected] for availability. | 155791428 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155791428 | 2026-07-25 12:43:13 | 0 | |||||
|
SS-Chr3BN.SS-(D3Mgh13-D3Rat218)/Mcwi Resource Report Resource Website |
RRID:RGD_155791429 | Rattus norvegicus | SS/JrHsdMcwi were crossed withSS-Chr3BN.SS-(D3Rat222-D3Rat218)/Mcwi (jq strain), rats from F1 were backcrossed to SS/JrHsdMcwi to select the congenic strains carrying subregion of jq to BN chromosome 3. Contact MCW rat distribution at [email protected] for availability. | 155791429 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155791429 | 2026-07-25 12:43:13 | 0 | |||||
|
SS-Chr3BN.SS-(D3Rat26-D3Rat218)/Mcwi Resource Report Resource Website |
RRID:RGD_155791426 | Rattus norvegicus | SS/JrHsdMcwi were crossed withSS-Chr3BN.SS-(D3Rat222-D3Rat218)/Mcwi (jq strain), rats from F1 were backcrossed to SS/JrHsdMcwi to select the congenic strains carrying subregion of jq to BN chromosome 3. Contact MCW rat distribution at [email protected] for availability. | 155791426 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155791426 | 2026-07-25 12:43:13 | 0 | |||||
|
F344.VF-Dop1avf/Omu Resource Report Resource Website |
RRID:RGD_598092595 | Rattus norvegicus | A congenic strain generated by backcrossing VF/Kyo rats (donor line, NBRP Rat No. 0022, RGD:1302674) to the F344/DuCrlCrlj (RGD:69643). This congenic strain carries the vacuole formation causing mutation (Dop1avf) in Dopey1(Dop1a) from VF/Kyo strain. It was generated at Osaka Metropolitan University. National BioResource Project for the Rat in Japan | 598092595 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2025-03-28) | 598092595 | 2026-07-25 12:43:13 | 0 | |||||
|
SS-Chr3BN.SS-(D3Rat222-D3Mco33)/Mcwi Resource Report Resource Website |
RRID:RGD_155782884 | Rattus norvegicus | SS/JrHsdMcwi were crossed withSS-Chr3BN.SS-(D3Rat222-D3Rat218)/Mcwi (jq strain), rats from F1 were backcrossed to SS/JrHsdMcwi to select the congenic strains carrying subregion of jq to BN chromosome 3.. Contact MCW rat distribution at [email protected] for availability. | 155782884 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155782884 | 2026-07-25 12:43:13 | 0 | |||||
|
SS-Chr3BN.SS-(D3Rat222-D3Got42)/Mcwi Resource Report Resource Website |
RRID:RGD_155782883 | Rattus norvegicus | SS/JrHsdMcwi were crossed withSS-Chr3BN.SS-(D3Rat222-D3Rat218)/Mcwi (jq strain) , rats from F1 were backcrossed to SS/JrHsdMcwi to select the congenic strains carrying subregion of jq to BN chromosome 3. Contact MCW rat distribution at [email protected] for availability. | 155782883 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 155782883 | 2026-07-25 12:43:13 | 0 | |||||
|
BBDP.BBDR-Gimap5, WF-(D13Rat124-D13Mgh5)/Sunn Resource Report Resource Website |
RRID:RRRC_00791 | Rattus norvegicus | The Gimap5 congenic BBDP/WorSunn rats (BBDP.BBDR-Gimap5/Sunn) were corssed with the BBDP/WorSunn.WF-CD45 inbred line (BBDP.WF-(D13Rat124-D13Mgh5)/Sunn) to develop an inbred BBDP/WorSunn strain that would be congenic for both wild type Gimap5, hence non T lymphopenic (and consequently diabetes resistant), and for the WF-derived CD45.2 (RT7) allele (the original BBDP/WorSunn strain carries the CD45.1 allele). Rat Resource & Research Center | 00791 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm; Cryorecovery (as of 2019-03-18) | RGD_13702085, 13702085, RRRC_791, RRRC_0791, RRRC_00791 | 2026-07-25 02:42:05 | 0 | |||||
|
DA.KHW-(RT1-Db1-RT1-DMb) Resource Report Resource Website |
RRID:RRRC_00712 | Rattus norvegicus | The Tcs2 QTL in DA.KHW-(RT1-Db1-RT1-DMb)(DA.1HR10) contains a ~0.2 from DA.1H [DA.KHW-RT1h]. The insert spans 12 genes in the MHC-II region, including RT1-B and RT1-D. All genes in the insert have been sequenced and sequences are available at GenBank. Rat Resource and Research Center | 00712 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2017-02-14) | RGD_12743645, 12743645, RRRC_712, RRRC_0712, RRRC_00712 | 2026-07-25 02:42:05 | 0 | |||||
|
DA.AS2-(Tesb-RT1-DMb) Resource Report Resource Website |
RRID:RRRC_00714 | Rattus norvegicus | DA.F-(Tesb-RT1-DMb) (DA.1FR61) contains a ~0.4 Mb (min- max 0.25 - 0.53 Mb) insert from DA.1F (RGD:2307301). The insert spans 12-19 genes in the MHC-II/MHC-III regions, including RT1-B and RT1-D. The 12 genes in the MHC-II region have been sequenced and sequences are available from GenBank. Rat Resource and Research Center | 00714 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2017-02-14) | RGD_12743650, 12743650, RRRC_714, RRRC_0714, RRRC_00714 | 2026-07-25 02:42:05 | 0 | |||||
|
DA.KHW-(RT1-DMa-Mln) Resource Report Resource Website |
RRID:RRRC_00716 | Rattus norvegicus | The Tcs1 QTL in DA.KHW-(RT1-DMa-Mln)(DA.1HR83) contains a ~~0.85 Mb (min - max: 0.61 - 1.08 Mb) insert from DA.1H [DA.KHW-RT1h]. The inserted fragment spans the MHC-I region but excludes most of the MHC-II region, including the RT1-B and RT1-D genes. Rat Resource and Research Center | 00716 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2017-02-14) | RGD_12743652, 12743652, RRRC_716, RRRC_0716, RRRC_00716 | 2026-07-25 02:42:05 | 0 | |||||
|
DA.E3-(RT1-DMa-Mln) Resource Report Resource Website |
RRID:RRRC_00717 | Rattus norvegicus | The Tcs1 QTL in DA.E3-(RT1-DMa-Mln)(DA.1UR83) contains a ~0.85 Mb (min - max: 0.61 - 1.08 Mb) insert from DA.1U (RGD:10002745). The inserted fragment spans the MHC-I region but excludes most of the MHC-II region, including the RT1-B and RT1-D genes. Rat Resource and Research Center | 00717 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2017-02-14) | RGD_12743655, 12743655, RRRC_717, RRRC_0717, RRRC_00717 | 2026-07-25 02:42:05 | 0 | |||||
|
SS.SR-(rs106908358-rs105920659)/Opaz Resource Report Resource Website |
RRID:RRRC_00609 | Rattus norvegicus | Congenic strain which was generated using the speed congenic strategy by backcrossing SS/JrHsd and SR/JrHsd parental strains. The SR chromosome 1 region from rs106908358 to rs105920659 was introgressed on the genetic background of SS. Rat Resource and Research Center | 00609 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2017-02-22) | RGD_12790962, 12790962, RRRC_609, RRRC_0609, RRRC_00609 | 2026-07-25 02:42:05 | 0 | |||||
|
SS.SR-(D1Rat68-rs65309623)/Opaz Resource Report Resource Website |
RRID:RRRC_00608 | Rattus norvegicus | Congenic strain which was generated using the speed congenic strategy by backcrossing SS/JrHsd and SR/JrHsd parental strains. The SR chromosome 1 region from D1Rat68 to rs65309623 was introgressed on the genetic background of SS. Rat Resource and Research Center | 00608 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2017-02-22) | RGD_12790959, 12790959, RRRC_608, RRRC_0608, RRRC_00608 | 2026-07-25 02:42:05 | 0 | |||||
|
DA.F344-(D7Rat15-D7Mit2) Resource Report Resource Website |
RRID:RRRC_00681 | Rattus norvegicus | The Cia4d (D7Rat15 -D7Mit2) interval was introgressed from F344 into DA/BklArb rats through 7 backcrosses into DA/BklArb rats followed by 3 additional backcrosses into DA/BklArbNsi rats. Heterozygous DA.F344(Cia4d) rats were brother-sister mated, and the recombinant strain was maintained in the homozygous state thereafter. Rat Resource and Research Center | 00681 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2017-02-06) | RGD_12738460, 12738460, RRRC_681, RRRC_0681, RRRC_00681 | 2026-07-25 02:42:05 | 0 | |||||
|
LEW.WKY-(D13Arb15-D13Rat77)(D16Rat40-D16Rat88)/Tja Resource Report Resource Website |
RRID:RRRC_00709 | Rattus norvegicus | Segment of interest from chr 13 and chr 16 of WKY/NCrl were introgressed into LEW/SsNHsd National BioResource Project for the Rat in Japan, Rat Resource and Research Center | 00709 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Embryo; Cryopreserved Sperm (as of 2017-01-26) | RGD_9685759, 9685759, RRRC_709, RRRC_0709, RRRC_00709 | 2026-07-25 02:42:04 | 0 | |||||
|
DA.F344-(D10Got152-D10Mcw1) Resource Report Resource Website |
RRID:RRRC_00675 | Rattus norvegicus | DA/BklArb rats through 8 backcrosses into DA/BklArb rats followed by 7 additional backcrosses into DA/BklArbNsi rats. Heterozygous DA.F344(Cia5a5)(D10Got152-D10Mcw1) rats were brother-sister mated, and the recombinant strain was maintained in the homozygous state thereafter. Rat Resource and Research Center | 00675 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2017-02-06) | RGD_12738457, 12738457, RRRC_675, RRRC_0675, RRRC_00675 | 2026-07-25 02:42:05 | 0 | |||||
|
DA.F344-(D10Got155-D10Nsi55) Resource Report Resource Website |
RRID:RRRC_00674 | Rattus norvegicus | The Cia5a10 (D10Got155-D10Nsi55) interval was introgressed from F344 into DA/BklArb rats through 8 backcrosses into DA/BklArb rats followed by 7 additional backcrosses into DA/BklArbNsi rats. Heterozygous DA.F344(Cia5a10) rats were brother-sister mated, and the recombinant strain was maintained in the homozygous state thereafter. Rat Resource and Research Center | 00674 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm (as of 2017-02-06) | RGD_12738455, 12738455, RRRC_674, RRRC_0674, RRRC_00674 | 2026-07-25 02:42:05 | 0 | |||||
|
BN.LEW-(D10Rat258 and D10Rat51)/Ssn Resource Report Resource Website |
RRID:RRRC_00752 | Rattus norvegicus | Severe osteopetrosis with numerous non-functioning osteoclasts. Locus on chromosome 10. Homozygotes not fertile, need to test breed to ID heterozygotes. Homozygotes have no teeth, require ground food. One of only 4 osteopetrotic mutations in rat. Genetic lesion is not yet known but mutation is inherited in an autosomal recessive manner. The candidate gene region has been localized to Chr 10 between D10Rat258 and D10Rat51. original background strain is LEW/Ssn. Deposited at Rat Resource and Research Center | 00752 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Sperm; Cryorecovery (as of 2024-01-11) | RGD_14695063, 14695063, RRRC_752, RRRC_0752, RRRC_00752 | 2026-07-25 02:42:05 | 0 | |||||
|
BBDR.F344-(D4Mgh24-D4Rhw6),BBDP-(D4Rhw6-D4Rhw10)/Rhw Resource Report Resource Website |
RRID:RRRC_00458 | Rattus norvegicus | 3 Mb of F344 DNA introgressed on Chr.4 between D4Mgh24 (73.75 Mb) and D4Rhw6 (76.83 Mb), and BB diabetes prone (DP) DNA introgressed from D4Rhw6 to D4Rhw10 (the most distal marker the end of the chromosome) Rat Resource and Research Center | 00458 | congenic | Rat Resource and Research Center (RRRC) | RRRC | Cryopreserved Embryo; Cryopreserved Sperm; Cryorecovery (as of 2019-06-27) | RGD_14695004, 14695004, RRRC_458, RRRC_0458, RRRC_00458 | 2026-07-25 02:42:05 | 0 |
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Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
