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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
SS.BN-(D13Rat111-D13Hmgc85)/Mcwi Resource Report Resource Website |
RRID:RGD_12798538 | Rattus norvegicus | SS/JrHsdMcwi were crossed with SS.BN-(D13Rat111-D13Got22)/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain | 12798538 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 12798538 | 2026-07-25 12:43:02 | 0 | |||||
|
FHH.FHH.3BN-(3p-D3Rat98)/Mcwi Resource Report Resource Website |
RRID:RGD_10395249 | Rattus norvegicus | (FHH X FHH-3BN/Mcwi) F2 males were backcrossed with FHH-3BN/Mcwi females to produce offsprings, these were intercrossed to generate this congenic line | 10395249 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 10395249 | 2026-07-25 12:43:01 | 0 | |||||
|
SCR/Sscr Resource Report Resource Website 1+ mentions |
RRID:RGD_11564350 | Rattus norvegicus | Genetic Cataract rat SCR（Shumiya Cataract Rat）was segrigated from a SHR-fa strain colony that developed nuclear cataract at adult stage. This strain is a double mutant caused by recessive gene (ctr1) and dominant lethal gene (Ctr2l) and established by Dr. Shumiya at Tokyo Metropolitan Institute of Gerontology. In 2003, this strain was introduced to Kyoritsu College of Pharmacy (keio University Faculty of Pharmacy). ctr1 is lanosterol synthase (Lss) and Ctr2 is farnesyl diphosphate farnesyl transferase 1 (Fdft1). | 11564350 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Embryo (as of 2016-11-16) | 11564350 | 2026-07-25 12:43:02 | 2 | |||||
|
F344.ZUC-(Leprfa),OLETF-(D5Rat166-D5Rat90)/Tj Resource Report Resource Website |
RRID:RGD_11532753 | Rattus norvegicus | The F344.ZUC,OLETF double congenic was produced by crossing F344.ZUC-Leprfa with F344.OLETF-( D5Rat166-D5Rat90) and then selecting Leprfa -Niddm24 (fa/fa-Nidd6/of) homozygotes National BioResource Project for the Rat in Japan | 11532753 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 11532753 | 2026-07-25 12:43:02 | 0 | |||||
|
BDIX.BDIV-D6Mit8-D6Rat229/Zte Resource Report Resource Website |
RRID:RGD_12738394 | Rattus norvegicus | The BDIX.BDIV-D6Mit8-D6Rat229/Zte congenic strain was produced by crossing BDIX (tumor-susceptible) and BDIV (tumor resistant) and then selecting for strains carrying homozygous segments of the BDIV chromosome on a BDIX background. | 12738394 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 12738394 | 2026-07-25 12:43:02 | 0 | |||||
|
SS.BN-(D13Got42-D13Rat130)/Mcwi Resource Report Resource Website |
RRID:RGD_12792945 | Rattus norvegicus | SS/JrHsdMcwi were crossed with SS.BN-(D13Rat151-D13Rat197)/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain | 12792945 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 12792945 | 2026-07-25 12:43:02 | 0 | |||||
|
BDIX.BDIV-D10Got1-D10Rat45/Zte Resource Report Resource Website |
RRID:RGD_11554329 | Rattus norvegicus | The BDIX.BDIV-D10Got1-D10Rat45/Zte congenic strain was produced by crossing BDIX (tumor-susceptible) and BDIV (tumor resistant) and then selecting for strains carrying homozygous segments of the BDIV chromosome on a BDIX background. | 11554329 | congenic | Rat Genome Database (RGD) | RGD | Live Animals (as of 2016-10-26) | 11554329 | 2026-07-25 12:43:03 | 0 | |||||
|
BDIX.BDIV-D10Mit3-D10Mgh16/Zte Resource Report Resource Website |
RRID:RGD_11554327 | Rattus norvegicus | The BDIX.BDIV-D10Mit3-D10Mgh16/Zte congenic strain was produced by crossing BDIX (tumor-susceptible) and BDIV (tumor resistant) and then selecting for strains carrying homozygous segments of the BDIV chromosome on a BDIX background. | 11554327 | congenic | Rat Genome Database (RGD) | RGD | Live Animals (as of 2016-10-26) | 11554327 | 2026-07-25 12:43:03 | 0 | |||||
|
ExHC.BN-(D14Got74-D14Rat132)/Kyu Resource Report Resource Website |
RRID:RGD_12879426 | Rattus norvegicus | This congenic strain was established by introducing a segment of chromosome14 (D14Got74-D14Rat132 including Smek2 gene) from Brown Norway(BN)/seac strain into ExHC/Seac strain. National BioResource Project for the Rat in Japan | 12879426 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Embryo (as of 2017-04-19) | 12879426 | 2026-07-25 12:43:02 | 0 | |||||
|
BDIX.BDIV-D6Rat132-D6Mgh3/Zte Resource Report Resource Website |
RRID:RGD_12738388 | Rattus norvegicus | The BDIX.BDIV-D6Rat132-D6Mgh3/Zte congenic strain was produced by crossing BDIX (tumor-susceptible) and BDIV (tumor resistant) and then selecting for strains carrying homozygous segments of the BDIV chromosome on a BDIX background. | 12738388 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 12738388 | 2026-07-25 12:43:03 | 0 | |||||
|
SS.BN-(D13Hmgc1041-D13Hmgc664)/Mcwi Resource Report Resource Website |
RRID:RGD_12792214 | Rattus norvegicus | SS/JrHsdMcwi were crossed with SS.BN-(D13Got45-D13Hmgc664)/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain | 12792214 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 12792214 | 2026-07-25 12:43:02 | 0 | |||||
|
SS.BN-(D13Hmgc1048-D13Hmgc1050)/Mcwi Resource Report Resource Website |
RRID:RGD_12792213 | Rattus norvegicus | SS/JrHsdMcwi were crossed with SS.BN-(D13Got45-D13Hmgc664)/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain | 12792213 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 12792213 | 2026-07-25 12:43:02 | 0 | |||||
|
SS.BN-(D13Hmgc1048-D13Hmgc664)/Mcwi Resource Report Resource Website |
RRID:RGD_12792211 | Rattus norvegicus | SS/JrHsdMcwi were crossed with SS.BN-(D13Got45-D13Hmgc664)/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain | 12792211 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 12792211 | 2026-07-25 12:43:02 | 0 | |||||
|
F344.LEC-(D4Nirs8-D4Nirs2)/Nrs Resource Report Resource Website |
RRID:RGD_11565094 | Rattus norvegicus | This strain was established by crossing F344.LEC-xhs1/1Nrs (NBR-rat #0293)(RGD:2304293) with F344/NSlc (RGD:1302627). The radiation sensitivity level of this strain is similar to F344.LEC-xhs1/1Nrs. National BioResource Project for the Rat in Japan | 11565094 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2016-11-18) | 11565094 | 2026-07-25 12:43:03 | 0 | |||||
|
SS.BN-(D13Got42-D13Hmgc497)/Mcwi Resource Report Resource Website |
RRID:RGD_12792947 | Rattus norvegicus | SS/JrHsdMcwi were crossed with SS.BN-(D13Rat151-D13Rat197)/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain | 12792947 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 12792947 | 2026-07-25 12:43:03 | 0 | |||||
|
SS.BN-(D13Got42-D13Hmgc664)/Mcwi Resource Report Resource Website |
RRID:RGD_12792949 | Rattus norvegicus | SS/JrHsdMcwi were crossed with SS.BN-(D13Rat151-D13Rat197)/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain | 12792949 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 12792949 | 2026-07-25 12:43:03 | 0 | |||||
|
SS.BN-(D13Got42-D13Hmgc354)/Mcwi Resource Report Resource Website |
RRID:RGD_12792946 | Rattus norvegicus | SS/JrHsdMcwi were crossed with SS.BN-(D13Rat151-D13Rat197)/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain | 12792946 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 12792946 | 2026-07-25 12:43:03 | 0 | |||||
|
ACI.BN-(Fer1l6rgdv775925951-C-D7Uwm27)/Shul Resource Report Resource Website |
RRID:RGD_13210773 | Rattus norvegicus | This congenic strain contains a region of BN/SsNHsd chromosome 7 transferred to the ACI/SegHsd strain background. | 13210773 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2017-09-07) | 13210773 | 2026-07-25 12:43:04 | 0 | |||||
|
SHRSP.SHR-(D1Rat95-D1Got87)/Izm Resource Report Resource Website |
RRID:RGD_11565132 | Rattus norvegicus | A congenic strain made by introducing a segments of chromosome 1 from SHR/Izm into SHRSP/Izm National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan. | 11565132 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Sperm (as of 2016-11-21) | 11565132 | 2026-07-25 12:43:03 | 0 | |||||
|
SHRSP.WKY-(D3Mgh16-D3Rat80)/Gcrc Resource Report Resource Website |
RRID:RGD_13432200 | Rattus norvegicus | Congenic sub-strains were generated by backcrossing male SHRSP.WKY-(D3Mgh16-D3Rat114)/Gcrc rats to SHRSP females. Progeny generated from this backcross were heterozygous throughout the original congenic interval. Brother X sister mating was carried out to generate sub-strains containing smaller congenic intervals. | 13432200 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 13432200 | 2026-07-25 12:43:03 | 0 |
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Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
