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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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lem-2(sbw5[lem-2::mNeonGreen]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063130 | Caenorhabditis elegans | lem-2(sbw5[lem-2::mNeonGreen]) II. | Made_by: Sarah Barger|"mNeonGreen tag inserted at C-terminus of endogenous lem-2 locus using self-exising drug selection casette method (described by Hastie et al., 2019 J Microbiol Biol Educ). Reference: Barger SR, et al. J Cell Sci 1 November 2023; 136 (21): jcs261385. doi: https:" | WBGene00002275(lem-2) | WBGene00002275(lem-2) | WB-STRAIN:WBStrain00063130 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:50 | 0 | ||||
|
dpy-10(cn64) rab-3(ftw79) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063094 | Caenorhabditis elegans | dpy-10(cn64) rab-3(ftw79) II. | rab-3(ftw79[rab-3::SL2::LoxP::GFP::NLS::3'UTR::Abeta(inv)::sigPep(inv)::T2A(inv)::wrmScarlet11(inv)::LoxP(inv)]) II. Modified endogenous rab-3 locus co-expresses stochastic, switchable cassette by trans-splicing using CRISPR-Cas9. Green fluorescence visible in neurons by dissection fluorescence microscopy. Inverted LoxP sites flank the GFP-NLS and inverted wrmScarlet11::T2A::signalPeptide::Abeta insert. Please contact Ryan Littlefield prior to publishing work using this strain. | WBGene00001072(dpy-10)|WBGene00004267(rab-3) | WBGene00001072(dpy-10), WBGene00004267(rab-3) | WB-STRAIN:WBStrain00063094 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:49 | 0 | ||||
|
mlc-2(ftw80[LifeAct::wrmScarlet::SL2::mlc-2]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063095 | Caenorhabditis elegans | mlc-2(ftw80[LifeAct::wrmScarlet::SL2::mlc-2]) X. | Endogenous mlc-2 locus co-expresses LifeAct peptide fused to wrmScarlet. Myosin light chain is untagged. Bright red fluorescence in all muscles is visible by dissection fluorescence microscopy. Broad bands of fluorescence are visible in body wall muscle by confocal microscopy. Please contact Ryan Littlefield prior to publishing work with this strain. | WBGene00003370(mlc-2) | WBGene00003370(mlc-2) | WB-STRAIN:WBStrain00063095 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:49 | 0 | ||||
|
lem-2(sbw20) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063133 | Caenorhabditis elegans | lem-2(sbw20) II. | CRISPR/Cas9-engineered deletion of entire lem-2 locus. Reference: Barger SR, et al. J Cell Sci 1 November 2023; 136 (21): jcs261385. doi: https:|"Made_by: Sarah Barger" | WBGene00002275(lem-2) | WBGene00002275(lem-2) | WB-STRAIN:WBStrain00063133 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:50 | 0 | ||||
|
ustSi268 I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063134 | Caenorhabditis elegans | ustSi268 I. | ustSi268 [mex-5p::tagrfp::elli-1::tbb-2 3'UTR] I. Inserted into LG I (-5.51 cM) locus using CRISPR/CAS9 engineering. Reference: Huang X, et al. 2024. Dev Cell. Compartmentalized localization of perinuclear proteins within germ granules in C. elegans. Reference: Chen X, et al. Nat Commun. 2024 Jul 10;15(1):5799. doi: 10.1038/s41467-024-50027-3. PMID: 38987544. | WB-STRAIN:WBStrain00063134 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:50 | 0 | ||||||
|
baf-1(sbw7[mNeonGreen::baf-1]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063131 | Caenorhabditis elegans | baf-1(sbw7[mNeonGreen::baf-1]) III. | Made_by: Sarah Barger|"mNeonGreen tag inserted at N-terminus of endogenous baf-1 locus using self-excising drug selection cassette method (described by Dickinson, et al. 2015, Genetics). Reference: Barger SR, et al. J Cell Sci 1 November 2023; 136 (21): jcs261385. doi: https:" | WBGene00000235(baf-1) | WBGene00000235(baf-1) | WB-STRAIN:WBStrain00063131 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:50 | 0 | ||||
|
tni-3(ftw13[tni-3::mCherry::SL2::GFP::NLS]) V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063099 | Caenorhabditis elegans | tni-3(ftw13[tni-3::mCherry::SL2::GFP::NLS]) V. | Endogenous tni-3 locus tagged with mCherry using CRISPR/Cas9. GFP-nls coexpressed from the endogenous promoter using SL2 trans-splicing. Visible using fluorescent dissecting microscopes. WT movement and behavior. Please contact Ryan Littlefield prior to publishing work using this strain.|"Made_by: Ryan Littlefield & Tammie Ward" | WBGene00006585(tni-3) | WBGene00006585(tni-3) | WB-STRAIN:WBStrain00063099 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:50 | 0 | ||||
|
fbf-2(ust337[fbf-2::GFP::3xFlag]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063138 | Caenorhabditis elegans | fbf-2(ust337[fbf-2::GFP::3xFlag]) II. | GFP::3xFlag inserted into endogenous fbf-2 locus using CRISPR/CAS9 engineering. Reference: Huang X, et al. 2024. Dev Cell. Compartmentalized localization of perinuclear proteins within germ granules in C. elegans. Reference: Huang X, et al. 2024. Dev Cell. Compartmentalized localization of perinuclear proteins within germ granules in C. elegans.|"Made_by: Xiaona Huang" | WBGene00001402(fbf-2) | WBGene00001402(fbf-2) | WB-STRAIN:WBStrain00063138 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:50 | 0 | ||||
|
ZK1240.6(ve999[LoxP + myo-2p::GFP::unc-54 3' UTR + rps-27p::neoR::unc-54 3' UTR + LoxP]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063086 | Caenorhabditis elegans | ZK1240.6(ve999[LoxP + myo-2p::GFP::unc-54 3' UTR + rps-27p::neoR::unc-54 3' UTR + LoxP]) II. | Homozygous viable. Deletion of 398 bp with Calarco/Colaiacovo selection cassette conferring myo-2 GFP and G418 resistance inserted at break in parental strain N2. Left flanking Sequence: TCCTGAAAATTAATATTAGGTACCTGACCT ; Right flanking sequence: ACTTGGAAATTGGAGAGCAAGTAAAAGTTA. ZK1240.6 sgRNA A: ACTTCAGAACCTGATATGCA; ZK1240.6 sgRNA B: TAGTCGAGTTATTCGTGCAA. Please reference Au et al., G3 9(1): 135-144 2019 in any work resulting from use of this mutation.|"Made_by: RG KO Group" | WBGene00003514(myo-2)|WBGene00004496(rps-27)|WBGene00006789(unc-54) | WBGene00003514(myo-2), WBGene00004496(rps-27), WBGene00006789(unc-54) | WB-STRAIN:WBStrain00063086 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:49 | 0 | ||||
|
Y25C1A.8(ve996[LoxP + myo-2p::GFP::unc-54 3' UTR + rps-27p::neoR::unc-54 3' UTR + LoxP]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063083 | Caenorhabditis elegans | Y25C1A.8(ve996[LoxP + myo-2p::GFP::unc-54 3' UTR + rps-27p::neoR::unc-54 3' UTR + LoxP]) II. | Homozygous viable. Deletion of 3675 bp with Calarco/Colaiacovo selection cassette conferring myo-2 GFP and G418 resistance inserted at break in parental strain N2. Left flanking Sequence: CACTTTCTGGGCAAGAGCATTCACCGCCCG ; Right flanking sequence: CGGTTTCGCTGAAAATCGATAATTTTTGGG. Y25C1A.8 sgRNA A: CAGATGCTCATGCTCATGCT; Y25C1A.8 sgRNA B: CCAATTTTGCTTTTCGCGCG. Please reference Au et al., G3 9(1): 135-144 2019 in any work resulting from use of this mutation.|"Made_by: RG KO Group" | WBGene00003514(myo-2)|WBGene00004496(rps-27)|WBGene00006789(unc-54) | WBGene00003514(myo-2), WBGene00004496(rps-27), WBGene00006789(unc-54) | WB-STRAIN:WBStrain00063083 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:49 | 0 | ||||
|
tbb-4(tj74[gfp::TEV::3xFLAG::tbb-4]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063122 | Caenorhabditis elegans | tbb-4(tj74[gfp::TEV::3xFLAG::tbb-4]) X. | GFP::TEV::3xFLAG tag inserted into the endogenous tbb-4 locus. Reference: Nishida K, et al. Cell Struct. Funct. 2021 Jun 30;46(1):51-64. PMID: 33967119. | WBGene00006538(tbb-4) | WBGene00006538(tbb-4) | WB-STRAIN:WBStrain00063122 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:50 | 0 | ||||
|
mec-7(tj77[gfp::TEV::3xFLAG::mec-7]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063123 | Caenorhabditis elegans | mec-7(tj77[gfp::TEV::3xFLAG::mec-7]) X. | GFP::TEV::3xFLAG tag inserted into the endogenous mec-7 locus. Reference: Nishida K, et al. Cell Struct. Funct. 2021 Jun 30;46(1):51-64. PMID: 33967119. | WBGene00003171(mec-7) | WBGene00003171(mec-7) | WB-STRAIN:WBStrain00063123 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:50 | 0 | ||||
|
tba-7(tj66[gfp::TEV::3xFLAG::tba-7]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063120 | Caenorhabditis elegans | tba-7(tj66[gfp::TEV::3xFLAG::tba-7]) III. | GFP::TEV::3xFLAG tag inserted into the endogenous tba-7 locus. Reference: Nishida K, et al. Cell Struct. Funct. 2021 Jun 30;46(1):51-64. PMID: 33967119.|"Made_by: Hiroyuki Obinata" | WBGene00006533(tba-7) | WBGene00006533(tba-7) | WB-STRAIN:WBStrain00063120 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:50 | 0 | ||||
|
tba-5(tj102[gfp::TEV::3xFLAG::tba-5]) I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063126 | Caenorhabditis elegans | tba-5(tj102[gfp::TEV::3xFLAG::tba-5]) I. | GFP::TEV::3xFLAG tag inserted into the endogenous tba-5 locus. Reference: Nishida K, et al. Cell Struct. Funct. 2021 Jun 30;46(1):51-64. PMID: 33967119.|"Made_by: Shizuka Onodera" | WBGene00006531(tba-5) | WBGene00006531(tba-5) | WB-STRAIN:WBStrain00063126 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:50 | 0 | ||||
|
tba-9(tj100[gfp::TEV::3xFLAG::tba-9]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063125 | Caenorhabditis elegans | tba-9(tj100[gfp::TEV::3xFLAG::tba-9]) X. | GFP::TEV::3xFLAG tag inserted into the endogenous tba-9 locus. Reference: Nishida K, et al. Cell Struct. Funct. 2021 Jun 30;46(1):51-64. PMID: 33967119.|"Made_by: Hiroyuki Obinata" | WBGene00006535(tba-9) | WBGene00006535(tba-9) | WB-STRAIN:WBStrain00063125 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:50 | 0 | ||||
|
ustSi64 II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063195 | Caenorhabditis elegans | ustSi64 II. | ustSi64 [wago-3p::3xFlag::GFP::wago-3::wago-3 3'UTR + Cbr-unc-119(+)] II. Inserted into ttTi5605 of parental strain EG4322. Reference: Huang X, et al. 2024. Dev Cell. Compartmentalized localization of perinuclear proteins within germ granules in C. elegans. | WB-STRAIN:WBStrain00063195 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:51 | 0 | ||||||
|
ife-3(ust639[ife-3::GFP::3xFlag]) V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063199 | Caenorhabditis elegans | ife-3(ust639[ife-3::GFP::3xFlag]) V. | GFP::3xFlag inserted into endogenous ife-3 locus using CRISPR/CAS9 engineering. Reference: Zeng C, et al. Cell Rep. 2019 Jun 18;27(12):3561-3572.e3. doi: 10.1016/j.celrep.2019.05.076. PMID: 31216475.|"Made_by: Chenmimg Zeng" | WBGene00002061(ife-3) | WBGene00002061(ife-3) | WB-STRAIN:WBStrain00063199 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:51 | 0 | ||||
|
wyIs891 III; unc-10(wy1235[unc-10::FLPon::mScarlet-I]) syd-2(wy1323) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063237 | Caenorhabditis elegans | wyIs891 III; unc-10(wy1235[unc-10::FLPon::mScarlet-I]) syd-2(wy1323) X. | Made_by: Nathan McDonald|"wyIs891 [unc-86p::FLP + odr-1p::RFP] III. FLPon::mScarlet-I tag inserted into endogenous unc-10 locus. GFP tag inserted into endogenous syd-2 locus with (517-836) region replaced by worm-optimized FUS 1-163. Reference: McDonald NA, et al. Nature. 2020 Dec;588(7838):454-458. PMID: 33208945." | WBGene00006364(syd-2)|WBGene00006750(unc-10) | WBGene00006364(syd-2), WBGene00006750(unc-10) | WB-STRAIN:WBStrain00063237 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:51 | 0 | ||||
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wyIs891 III; unc-10(wy1235[unc-10::FLPon::mScarlet-I]) syd-2(wy5) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063234 | Caenorhabditis elegans | wyIs891 III; unc-10(wy1235[unc-10::FLPon::mScarlet-I]) syd-2(wy5) X. | Made_by: Nathan McDonald|"wyIs891 [unc-86p::FLP + odr-1p::RFP] III. FLPon::mScarlet-I tag inserted into endogenous unc-10 locus. Reference: McDonald NA, et al. Nature. 2020 Dec;588(7838):454-458. PMID: 33208945." | WBGene00006364(syd-2)|WBGene00006750(unc-10) | WBGene00006364(syd-2), WBGene00006750(unc-10) | WB-STRAIN:WBStrain00063234 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:51 | 0 | ||||
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rab-3(wy1332[mScarlet-I::FLPon::rab-3B]) II; wyIs891 III; syd-2(wy1052[GFP::syd-2]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00063235 | Caenorhabditis elegans | rab-3(wy1332[mScarlet-I::FLPon::rab-3B]) II; wyIs891 III; syd-2(wy1052[GFP::syd-2]) X. | Made_by: Nathan McDonald|"wyIs891 [unc-86p::FLP + odr-1p::RFP] III. mScarlet-I::FLPon tag inserted into endogenous rab-3 locus specifically tagging isoform B, which is most abundant in neurons. GFP tag inserted into N-terminus of endogenous syd-2 locus. Reference: McDonald NA, et al. Nature. 2020 Dec;588(7838):454-458. PMID: 33208945." | WBGene00004267(rab-3)|WBGene00006364(syd-2) | WBGene00004267(rab-3), WBGene00006364(syd-2) | WB-STRAIN:WBStrain00063235 | WormBase (WB) | WB | unknown | 2026-09-05 04:59:51 | 0 |
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Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
