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http://www.wormbase.org/db/get?name=WBStrain00030556

Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: PMID:38946472
Synonyms: ccTi1594 unc-119(ed3) III; hjSi20 IV.
Alternate IDs: WB-STRAIN:PD2217, CGC_PD2217
Notes: ccTi1594 [mex-5p::GFP::gpr-1::smu-1 3'UTR + Cbr-unc-119(+), III: 680195] III. hjSi20 [myo-2p::mCherry::unc-54 3'UTR] IV. GFP expression in germline. mCherry expression in pharynx. The ccTi1594 transgene rescues unc-119(ed3). High penetrance of non-Mendelian inheritance. The GPR-1 overexpression transgene consistently confers a high penetrance of non-Mendelian inheritance; fluorescent markers allow tracking of Mendelian and non-Mendelian events. The genomic location of ccTi1594 is with respect to the WEBcel235 assembly.

Proper citation: RRID:WB-STRAIN:WBStrain00030556 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030553

Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:33313486, PMID:33458604, PMID:33693840, PMID:34156835, PMID:37008729, PMID:36595469, PMID:37170380, PMID:37590248, PMID:37777524, PMID:38596360, PMID:38488606, PMID:38771761, PMID:39712935
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:PD1074
Notes: A defined and recently cloned population of animals derived from the original Bristol variant of C. elegans originally obtained by Brenner from E. Dougherty with no known history of mutagenesis. Brenners original population, called N2, was used as the basis for the vast majority of laboratory strains in use currently. No early frozen stock of the unmutagenized N2 population currently exists, but later stocks were available from several laboratories. PD1074 is a clonal population founded by picking a single worm of one such stock, VC3510. VC3510 in turn derives from a subpopulation of N2 described in the literature as VC2010. PD1074 is intended to be used as a wild type reference strain with the closely matched genome assembly of Yoshimura et al (ref) available on Wormbase as VC2010-1.0. (ENA study accession PRJEB28388; assembly accession GCA_900538205). We note that PD1074 is expected to be largely similar to most lab N2 strains, but that as a clonal isolate derived from N2, there will be some loci that will vary compared to any other particular N2 isolate. One such example is a partial deletion of the alh-2 locus in PD1074. Additional loci that were found to vary between the prior N2 reference genome (WormBase release WS264) and the VC2010-1.0 assembly are detailed in supplemental table 8 in Yoshimura et al (ref).|"A defined and recently cloned population of animals derived from the original Bristol variant of C. elegans originally obtained by Brenner from E. Dougherty with no known history of mutagenesis. Brenners original population, called N2, was used as the basis for the vast majority of laboratory strains in use currently. No early frozen stock of the unmutagenized N2 population currently exists, but later stocks were available from several laboratories. PD1074 is a clonal population founded by picking a single worm of one such stock, VC3510. VC3510 in turn derives from a subpopulation of N2 described in the literature as VC2010. PD1074 is intended to be used as a wild type reference strain with the closely matched genome assembly of Yoshimura, et al. (Genome Res. 2019 Jun;29(6):1009-1022) available on Wormbase as VC2010-1.0. (ENA study accession PRJEB28388; assembly accession GCA_900538205). We note that PD1074 is expected to be largely similar to most lab N2 strains, but that as a clonal isolate derived from N2, there will be some loci that will vary compared to any other particular N2 isolate. One such example is a partial deletion of the alh-2 locus in PD1074. Additional loci that were found to vary between the prior N2 reference genome (WormBase release WS264) and the VC2010-1.0 assembly are detailed in supplemental table 8 in Yoshimura, et al, (2019)."|"Added Wild_Isolate tag as genotype info suggesting that they were sampled from the wild."|"Made_by: Karen Artiles & Mark Edgley"|"no longer available from the CGC."|"Supplementary_genotype"|"WBStrain provided so WBPaper00061243 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061573 paper added based on AFP_Strain data."

Proper citation: RRID:WB-STRAIN:WBStrain00030553 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030562

Source Database: WormBase (WB)
Affected Genes: WBGene00008502(skih-2)|WBGene00011280(pelo-1)
Genomic Alteration: WBGene00008502(skih-2), WBGene00011280(pelo-1)
Availability: available
Source References: EMPTY
Synonyms: pelo-1(cc2849) III; skih-2(cc2854) IV.
Alternate IDs: WB-STRAIN:PD2860, CGC_PD2860
Notes: Made_by: Joshua Arribere|"Temperature-sensitive. Weakly fertile at 16C; sterile at 23C. Incomplete de-repression of nonstop mRNAs. Reference: Arribere, JA and Fire, AZ. Nonsense-mediated decay triggers SKI/pelota-dependent decay in a metazoan."

Proper citation: RRID:WB-STRAIN:WBStrain00030562 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030561

Source Database: WormBase (WB)
Affected Genes: WBGene00006789(unc-54)
Genomic Alteration: WBGene00006789(unc-54)
Availability: available
Source References: EMPTY
Synonyms: unc-54(cc2859[unc-54::GFP::TAA::NSUTR]) I.
Alternate IDs: WB-STRAIN:PD2859, CGC_PD2859
Notes: Endogenous unc-54::GFP made by CRISPR. Exhibits green thick muscle filaments in the body wall muscle. Weakly Unc. Reference: Arribere JA, Cenik ES, Jain N, Hess GT, Lee CH, Bassik MC, Fire AZ. Translation readthrough mitigation. Nature. 2016 Jun 30;534(7609):719-23. Epub 2016 Jun 1.|"Made_by: Joshua Arribere"

Proper citation: RRID:WB-STRAIN:WBStrain00030561 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030568

Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)|WBGene00006789(unc-54)
Genomic Alteration: WBGene00004010(pha-1), WBGene00006789(unc-54)
Availability: unknown
Source References: EMPTY
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:PD3852
Notes: EMPTY

Proper citation: RRID:WB-STRAIN:WBStrain00030568 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030566

Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:21177965
Synonyms: rrf-3(pk1426);him-8(e1489)
Alternate IDs: WB-STRAIN:PD3330
Notes: EMPTY

Proper citation: RRID:WB-STRAIN:WBStrain00030566 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030600

Source Database: WormBase (WB)
Affected Genes: WBGene00001072(dpy-10)|WBGene00002955(let-856)|WBGene00006744(unc-4)|WBGene00006787(unc-52)
Genomic Alteration: WBGene00001072(dpy-10), WBGene00002955(let-856), WBGene00006744(unc-4), WBGene00006787(unc-52)
Availability: available
Source References: PMID:9136012
Synonyms: let-856(cc514) unc-4(e120)/mnC1 [dpy-10(e128) unc-52(e444)] II.
Alternate IDs: WB-STRAIN:PD7227, CGC_PD7227
Notes: Heterozygotes are WT and segregate WT, paralyzed Dpys and Unc-4s which arrest as larval lethals.

Proper citation: RRID:WB-STRAIN:WBStrain00030600 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030530

Source Database: WormBase (WB)
Affected Genes: WBGene00022727(prkl-1)
Genomic Alteration: WBGene00022727(prkl-1)
Availability: available
Source References: EMPTY
Synonyms: prkl-1(zy11) IV.
Alternate IDs: WB-STRAIN:OU100, CGC_OU100
Notes: Reference: Sanchez-Alvarez L, et al. PLoS Genet. 2011 Sep;7(9):e1002257.

Proper citation: RRID:WB-STRAIN:WBStrain00030530 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030538

Source Database: WormBase (WB)
Affected Genes: WBGene00016201(tdo-2)
Genomic Alteration: WBGene00016201(tdo-2)
Availability: available
Source References: EMPTY
Synonyms: tdo-2(zg216) III.
Alternate IDs: WB-STRAIN:OW715, CGC_OW715
Notes: Crispr/Cas9 engineered deletion mutant removes 28 basepairs in tdo-2 coding region. Reference: Michels H, et al. Sci Rep. 2016 Dec 20;6:39199.|"Made_by: H. Michels"

Proper citation: RRID:WB-STRAIN:WBStrain00030538 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030535

Source Database: WormBase (WB)
Affected Genes: WBGene00015802(kynu-1)
Genomic Alteration: WBGene00015802(kynu-1)
Availability: available
Source References: EMPTY
Synonyms: kynu-1(tm4924) X.
Alternate IDs: WB-STRAIN:OW454, CGC_OW454
Notes: C15H9.7. Homozygous viable. Reference: van der Goot AT, et al. Proc. Natl. Acad. Sci. U.S.A. 2012 109(37) 14912-7.|"Made_by: A. van der Goot"

Proper citation: RRID:WB-STRAIN:WBStrain00030535 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030536

Source Database: WormBase (WB)
Affected Genes: WBGene00017051(afmd-1)
Genomic Alteration: WBGene00017051(afmd-1)
Availability: available
Source References: EMPTY
Synonyms: afmd-1(tm4547) IV.
Alternate IDs: WB-STRAIN:OW477, CGC_OW477
Notes: D2024.2. Homozygous viable. Reference: van der Goot AT, et al. Proc. Natl. Acad. Sci. U.S.A. 2012 109(37) 14912-7.|"Made_by: R. Seinstra"

Proper citation: RRID:WB-STRAIN:WBStrain00030536 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030533

Source Database: WormBase (WB)
Affected Genes: WBGene00001709(grk-2)
Genomic Alteration: WBGene00001709(grk-2)
Availability: available
Source References: EMPTY
Synonyms: grk-2(gk268) III; pkIs2386 IV.
Alternate IDs: WB-STRAIN:OW15, CGC_OW15
Notes: pkIs2386 [unc-54p::alpha-synnuclein::YFP + unc-119(+)].

Proper citation: RRID:WB-STRAIN:WBStrain00030533 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030531

Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: zyIs1.
Alternate IDs: WB-STRAIN:OU247, CGC_OU247
Notes: zyIs1 [lin-11::RFP + rol-6(su1006)]. Roller. Reference: Sanchez-Alvarez L, et al. PLoS Genet. 2011 Sep;7(9):e1002257.

Proper citation: RRID:WB-STRAIN:WBStrain00030531 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030539

Source Database: WormBase (WB)
Affected Genes: WBGene00016201(tdo-2)
Genomic Alteration: WBGene00016201(tdo-2)
Availability: available
Source References: EMPTY
Synonyms: tdo-2(zg217) III.
Alternate IDs: WB-STRAIN:OW716, CGC_OW716
Notes: Crispr/Cas9 engineered deletion mutant removes 14 basepairs in tdo-2 coding region. Reference: Michels H, et al. Sci Rep. 2016 Dec 20;6:39199.|"Made_by: H. Michels"

Proper citation: RRID:WB-STRAIN:WBStrain00030539 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030541

Source Database: WormBase (WB)
Affected Genes: WBGene00003046(lir-3)
Genomic Alteration: WBGene00003046(lir-3)
Availability: available
Source References: EMPTY
Synonyms: lir-3(tm813) II.
Alternate IDs: WB-STRAIN:OW1002, CGC_OW1002
Notes: Homozygous viable. Reference: Sin O, et al. Mol Cell. 2017 Mar 16;65(6):1096-1108.|"Made_by: O. Sin"

Proper citation: RRID:WB-STRAIN:WBStrain00030541 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030549

Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: ubIs6.
Alternate IDs: WB-STRAIN:PC73, CGC_PC73
Notes: ubIs6 [hsp16.1::hsp-16A::lacZ + rol-6(su1006)]. Transgene contains a translational fusion to lacZ in which a Sau 3A fragment containing the intergenic region of a hsp16-48 and hsp16-1 gene pair of locus hsp16A was fused in-frame to lacZ to the Sau 3A site in exon of hsp16-1. The contruct contains the SV40 nuclear localization signal fused to the beginning of the lacZ coding region. Published as ubIn6.

Proper citation: RRID:WB-STRAIN:WBStrain00030549 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030547

Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: ubIs4.
Alternate IDs: WB-STRAIN:PC71, CGC_PC71
Notes: Mutagen:Gamma Rays|"ubIs4 [hsp16.1::hsp-16A::lacZ + rol-6(su1006)]. Transgene contains the complete hsp16.48-1 gene pair of locus hsp16A with lacZ cloned in-frame into the second exon of hsp16.1. The contruct contains the SV40 nuclear localization signal fused to the beginning of the lacZ coding region. Published as ubIn4."

Proper citation: RRID:WB-STRAIN:WBStrain00030547 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030544

Source Database: WormBase (WB)
Affected Genes: WBGene00001174(egl-5)|WBGene00001864(him-5)|WBGene00006772(unc-36)
Genomic Alteration: WBGene00001174(egl-5), WBGene00001864(him-5), WBGene00006772(unc-36)
Availability: available
Source References: EMPTY
Synonyms: egl-5(n486) unc-36(e251) III; him-5(e1490) V.
Alternate IDs: WB-STRAIN:PB49, CGC_PB49
Notes: Unc and Egl. Throws males.

Proper citation: RRID:WB-STRAIN:WBStrain00030544 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030545

Source Database: WormBase (WB)
Availability: available
Source References: PMID:22301316, PMID:33593818, PMID:33820969, PMID:38564369
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:PB303, CGC_PB303
Notes: Caenorhabditis elegans from association with a terrestrial isopod, Porcellio scaber, that was obtained from Ward's Biological Supply. Species ID confirmed by mating tests with JK574 fog-2(q71). Caenorhabditis elegans wild isolate.|"WBStrain provided so WBPaper00061063 paper added based on AFP_Strain data."

Proper citation: RRID:WB-STRAIN:WBStrain00030545 Copy   

•   Source: Integrated Animals

http://www.wormbase.org/db/get?name=WBStrain00030542

Source Database: WormBase (WB)
Affected Genes: WBGene00001864(him-5)|WBGene00006839(unc-115)|WBGene00006870(vab-3)
Genomic Alteration: WBGene00001864(him-5), WBGene00006839(unc-115), WBGene00006870(vab-3)
Availability: available
Source References: PMID:15364906, PMID:33300872, PMID:38393469
Synonyms: him-5(e1490) V; unc-115(e2225) vab-3(bx23) X.
Alternate IDs: WB-STRAIN:PB1, CGC_PB1
Notes: Made_by: Baird S|"Unc-lethargic and kinker. Throws abnormal males-fused rays 4 and 6."|"WBStrain provided so WBPaper00060754 paper added based on AFP_Strain data."

Proper citation: RRID:WB-STRAIN:WBStrain00030542 Copy   

•   Source: Integrated Animals