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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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NIH Toolbox Dimensional Change Card Sort Test Resource Report Resource Website 1+ mentions |
NIH Toolbox Dimensional Change Card Sort Test (RRID:SCR_003616) | DCCS | assessment test provider, material resource | Assessment test that measures the cognitive flexibility of patients. Two target pictures are presented that vary along two dimensions (e.g., shape and color). Participants are asked to match a series of bivalent test pictures (e.g., yellow balls and blue trucks) to the target pictures, first according to one dimension (e.g., color) and then, after a number of trials, according to the other dimension (e.g., shape). Switch trials are also employed, in which the participant must change the dimension being matched. For example, after 4 straight trials matching on shape, the participant may be asked to match on color on the next trial and then go back to shape, thus requiring the cognitive flexibility to quickly choose the correct stimulus. Scoring is based on a combination of accuracy and reaction time, and the test takes approximately 4 minutes to administer. This test is recommended for ages 3-85. | cognitive flexibility, cognition, executive function | has parent organization: NIH Toolbox - Assessment of Neurological and Behavioral Function | nlx_157769 | SCR_003616 | 2026-07-25 12:12:28 | 2 | |||||||||
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CERAD - Consortium to Establish a Registry for Alzheimer's Disease Resource Report Resource Website 1000+ mentions |
CERAD - Consortium to Establish a Registry for Alzheimer's Disease (RRID:SCR_003016) | CERAD | assessment test provider, material resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on January 4, 2023.Consortium that developed brief, standardized and reliable procedures for the evaluation and diagnosis of patients with Alzheimer's disease (AD) and other dementias of the elderly. These procedures included data forms, flipbooks, guidebooks, brochures, instruction manuals and demonstration tapes, which are now available for purchase. The CERAD assessment material can be used for research purposes as well as for patient care. CERAD has developed several basic standardized instruments, each consisting of brief forms designed to gather data on normal persons as well as on cognitively impaired or behaviorally disturbed individuals. Such data permit the identification of dementia based on clinical, neuropsychological, behavioral or neuropathological criteria. Staff at participating CERAD sites were trained and certified to administer the assessment instruments and to evaluate the subjects enrolled in the study. Cases and controls were evaluated at entry and annually thereafter including (when possible) autopsy examination of the brain to track the natural progression of AD and to obtain neuropathological confirmation of the clinical diagnosis. The CERAD database has become a major resource for research in Alzheimer's disease. It contains longitudinal data for periods as long as seven years on the natural progression of the disorder as well as information on clinical and neuropsychological changes and neuropathological manifestations., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | clinical, behavior, late adult human, male, female, caucasian, african-american, autopsy, longitudinal, neuropsychology, neuropathology, FASEB list | has parent organization: Duke University; North Carolina; USA | Aging, Alzheimer's disease, Dementia, Cognitive impairment, Neurodegenerative disorder, Systemic illness, Cerebrovascular disease, Parkinson's disease, Depressive Disorder | NIA | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00523 | SCR_003016 | Consortium to Establish a Registry for Alzheimer's Disease | 2026-07-25 12:12:27 | 2336 | |||||
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Colorado Assessment Tests - Symptom Validity Resource Report Resource Website |
Colorado Assessment Tests - Symptom Validity (RRID:SCR_003520) | CAT Symptom Validity | assessment test provider, material resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented on July 17, 2013. Memory impairment is one of the most common complaints after head injury, and accordingly, individuals may attempt to feign memory impairment or exaggerate symptoms of memory impairment. This free neuropsychological evaluation software contains some of the most common tests used to detect malingering of memory impairment. This software package contains a number of tests of declarative memory that assess recall of information that has a personal and temporal context. The typical example of declarative tests used for detecting malingering are the auditory verbal learning test and forced choice test. These tests are included in Symptom Validity along with other tests of declarative memory (e.g., prose recall, questionnaire tests). Unfortunately, classification of individuals is not completely accurate even with the use of multiple declarative memory tests. Thus, other tests that can complement previously used declarative memory measures by enhancing classification accuracy may be of great value to the neuropsychologist assessing the possibility of malingering. Your software contains two tests of nondeclarative memory that have been previously shown to be useful in the detection of malingered memory deficits (Davis et al., 1997a, 1997b). These tests take advantage of the general laypersons misunderstanding of the test performance of a truly memory impaired individual. That is, amnesic patients have been shown to perform normally on these nondeclarative memory tests and this is counterintuitive to the memory performance expectations of the general layperson. The nondeclarative tests included in Symptom Validity are two repetition priming tests of word stem completion and two tests of pattern categorization learning. Note: At this time this program will run only on Windows 98. We are currently working on a version that will run under the newer operating systems. | auditory verbal learning test, craniocerebral trauma, declarative memory, disfunctional, human, memory, memory impairment, memory recall, neuropsychological assessment, nondeclarative memory, prose recall | has parent organization: University of Colorado; Colorado Springs; USA | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00213 | SCR_003520 | Symptom Validity | 2026-07-25 12:12:26 | 0 | |||||||
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NIH Toolbox Regional Taste Intensity Test Resource Report Resource Website |
NIH Toolbox Regional Taste Intensity Test (RRID:SCR_003637) | assessment test provider, material resource | Assessment test that measures the perceived intensity of quinine (a bitter tastant) and salt administered in liquid solutions. The tastants are applied to the tip of the tongue as well as the whole mouth and rated on a generalized labeled magnitude scale (ranging from no sensation at all to strongest sensation of any kind). The test is recommended for administration to participants ages 12-85 and takes approximately six minutes to administer. | sensation, taste, quinine, salt | has parent organization: NIH Toolbox - Assessment of Neurological and Behavioral Function | nlx_157788 | SCR_003637 | Regional Taste Intensity Test | 2026-07-25 12:12:28 | 0 | |||||||||
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NIH Toolbox Pain Intensity Survey Resource Report Resource Website |
NIH Toolbox Pain Intensity Survey (RRID:SCR_003636) | assessment test provider, material resource | A measure that consists of a single item measuring immediate (i.e., acute) pain in adults. As part of Toolbox, a single pain intensity item measures immediate (a.k.a. acute) pain for use in adults. It takes less than one minute to administer and is recommended for ages 18-85. | sensation, pain, adult human | has parent organization: NIH Toolbox - Assessment of Neurological and Behavioral Function | nlx_157787 | SCR_003636 | Pain Intensity Survey | 2026-07-25 12:12:27 | 0 | |||||||||
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NIH Toolbox Pain Interference Survey Resource Report Resource Website |
NIH Toolbox Pain Interference Survey (RRID:SCR_003635) | assessment test provider, material resource | A self-report scale that measures the degree to which pain interferes with other activities in life in adults. Pain interference items were developed as part of the NIH PROMIS. This measure is administered as a computer-adaptive test and takes approximately three minutes. It is recommended for ages 8-85. | sensation, pain | has parent organization: NIH Toolbox - Assessment of Neurological and Behavioral Function | nlx_157786 | SCR_003635 | Pain Interference Survey | 2026-07-25 12:12:28 | 0 | |||||||||
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NIH Toolbox Odor Identification Test Resource Report Resource Website |
NIH Toolbox Odor Identification Test (RRID:SCR_003634) | assessment test provider, material resource | Assessment test to assess a person's ability to identify various odors. Participants use scratch 'n' sniff cards and after scratching them one at a time, are asked to identify which of four pictures on the computer screen matches the odor they have just smelled. Participants ages 10-85 are administered nine odor cards, while those ages 3-9 are administered five odor cards. Child participants (ages 3 -9 years) are first asked to identify the eight pictures that are used as answer choices, to ensure they can complete the task. Having identified the pictures, they are asked if they have tasted or smelled the objects or foods depicted. This test takes approximately 4 to 5 minutes to administer and is recommended for ages 3-85. | sensation, olfaction, odor, smell | has parent organization: NIH Toolbox - Assessment of Neurological and Behavioral Function | nlx_157785 | SCR_003634 | Odor Identification Test | 2026-07-25 12:12:28 | 0 | |||||||||
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Measure Projection Toolbox Resource Report Resource Website 1+ mentions |
Measure Projection Toolbox (RRID:SCR_002429) | MPT | software resource, software toolkit | This toolbox is an EEGLAB plugin for performing Measure Projection Analysis. Measure Projection Analysis (MPA) is a novel probabilistic multi-subject inference method that overcomes EEG Independent Component (IC) clustering issues by abandoning the notion of distinct IC clusters. Instead, it searches voxel by voxel for brain regions having event-related IC process dynamics that exhibit statistically significant consistency across subjects and/or sessions as quantified by the values of various EEG measures. Local-mean EEG measure values are then assigned to all such locations based on a probabilistic model of IC localization error and inter-subject anatomical and functional differences. | reusable library, eeg, meg, electrocorticography, matlab, statistical operation, surrogate data analysis, visualization, measure projection analysis |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: EEGLAB has parent organization: Swartz Center for Computational Neuroscience |
Free, Available for download, Freely available | nlx_155809 | http://www.nitrc.org/projects/measure_project | SCR_002429 | Measure Projection Toolbox (MPT) | 2026-07-25 12:12:24 | 3 | ||||||
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Colorado Assessment Tests: n-Back Resource Report Resource Website |
Colorado Assessment Tests: n-Back (RRID:SCR_003517) | CAT n-Back | assessment test provider, material resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented on July 17, 2013. The modifiable n-Back test is free software presumed to measure executive control of the updating of information in working memory. The task requires the participant to monitor some dimension (e.g. content, position, numerosity) of a temporally present sequence of items, responding when the currently presented item matches on the relevant dimension an item that was just recently presented. The match can be with an item present either 1 back, 2 back, 3 back or n back. Considerable flexibility is provided to the experimenter in specifying various parameters of the experiment (e.g. presentation rate, n back, content, position, color). The n-Back test is presumed to measure executive control of the updating of information in working memory. (Shimamura, 2000) Watter, Geffen and Geffen (2001) based on their work with the P300 event-related-potential have suggested that the n-Back is a dual task in that latencies of the P300 did not change with increasing task difficulty, that is memory load while amplitude did reflecting in their view a reallocation of attention and processing capacity away from the matching subtask. The n-Back task is one in which the participant is presented a series of stimuli at a constant rate. The task of the participant is to determine if the currently presented stimulus is similar (along some dimension) to one they have recently (usually one, two or three positions back) seen in the stream. Match criteria can be dimensions like material, position on the screen, color or some combination. CATs n-Back allows for substantial control over the position in which the material is presented (nine different positions), the nature of the material (any character or dingbat string, and any color. The experimenter can set the speed at which the sequence is presented including both the stimulus on time and the inter-stimulus interval. Participant responses can be made either using the keyboard or the mouse. At this time no normative data is available for this test. | dual task, executive control, assessment, human, response to stimulus, working memory | has parent organization: University of Colorado; Colorado Springs; USA | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00212 | SCR_003517 | n-Back | 2026-07-25 12:12:27 | 0 | |||||||
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Integrative Modeling Platform Resource Report Resource Website 50+ mentions |
Integrative Modeling Platform (RRID:SCR_002982) | IMP | software resource, software toolkit | An open source C++ and Python toolbox for solving complex modeling problems, and a number of applications for tackling some common problems in a user-friendly way. Its broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies, by integrating data from diverse biochemical and biophysical experiments. It can also be used from the Chimera molecular modeling system, or via one of several web applications. | integrative modeling, structure determination, hybrid modeling, macromolecular assembly, c++, python, peptide, biomolecule, model, structural characterization, structure |
is related to: UCSF Chimera has parent organization: University of California at San Francisco; California; USA |
NIGMS R01 GM083960 | PMID:22272186 | GNU Lesser General Public License, v2.1 or later, Acknowledgement requested, GNU General Public License | SciRes_000187 | SCR_002982 | IMP - the Integrative Modeling Platform, Integrative Modeling Platform (IMP), IMP the Integrative Modeling Platform | 2026-07-25 12:12:26 | 54 | |||||
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Health Protection Agency Culture Collections Resource Report Resource Website |
Health Protection Agency Culture Collections (RRID:SCR_002858) | biomaterial supply resource, material resource | Archival database of cell lines and microbial strains. Maintained by Public Health England, the database is used by scientists to determine the effects of various substances on human cells as well as for controls for diagnostic and antimicrobial susceptibility tests. | cell line archive, microbial strain archive, public health england | Free, Freely available | nlx_152376 | SCR_002858 | Public Health England Culture Collections | 2026-07-25 12:12:24 | 0 | |||||||||
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pydicom Resource Report Resource Website 50+ mentions |
pydicom (RRID:SCR_002573) | pydicom | software resource, software toolkit | Software Python package for working with DICOM files, made for inspecting and modifying DICOM data in an easy pythonic way. The modifications can be written again to a new file. As a pure python package, it should run anywhere python runs without any other requirements. | reusable library, console (text based), dicom, magnetic resonance, os independent, python |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is listed by: Debian |
Free, Available for download, Freely available | nlx_155976 | http://www.nitrc.org/projects/pydicom, https://sources.debian.org/src/python3-pydicom/, | http://pydicom.googlecode.com | SCR_002573 | 2026-07-25 12:12:24 | 90 | ||||||
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GenomEUtwin Resource Report Resource Website 1+ mentions |
GenomEUtwin (RRID:SCR_002843) | GenomEUtwin | biomaterial supply resource, material resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented August 29, 2016. Study of genetic and life-style risk factors associated with common diseases based on analysis of European twins. The population cohorts used in the Genomeutwin study consist of Danish, Finnish, Italian, Dutch, English, Australian and Swedish twins and the MORGAM population cohort. This project will apply and develop new molecular and statistical strategies to analyze unique European twin and other population cohorts to define and characterize the genetic, environmental and life-style components in the background of health problems like obesity, migraine, coronary heart disease and stroke, representing major health care problems worldwide. The participating 8 twin cohorts form a collection of over 0.6 million pairs of twins. Tens of thousands of DNA samples with informed consents for genetic studies of common diseases have already been stored from these population-based twin cohorts. Studies targeted to cardiovascular traits are now being undertaken in MORGAM, a prospective case-cohort study. MORGAM cohorts include approximately 6000 individuals, drawn from population-based cohorts consisting of more than 80 000 participants who have donated DNA samples. | genetic, environment, lifestyle, gene, disease |
is listed by: One Mind Biospecimen Bank Listing is related to: KI Biobank - TwinGene has parent organization: University of Helsinki; Helsinki; Finland |
Twin | European Union | PMID:14624719 | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-25218 | SCR_002843 | Studies of European Volunteer Twins to Identify Genes Underlying Common Diseases, GenomEUtwin Project, GenomeEUtwin | 2026-07-25 12:12:26 | 1 | ||||
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SpecimenCentral.com Resource Report Resource Website 1+ mentions |
SpecimenCentral.com (RRID:SCR_003536) | SpecimenCentral.com | biomaterial supply resource, material resource | World's open biospecimen research database where biobanks and biomedical researchers meet to exchange human biospecimen needs and supply: whole blood, serum, plasma, solid tissue samples and more. The connection is accelerated so researchers save valuable time and money and tissue banks utilize inventory. The pace of specimen procurement remains unacceptably slow to the biomedical research community. Specimen Central is the foremost global resource to aid biomedical researchers in expediting their search for high quality human biospecimens, tissues, samples and specimens. They facilitate your search for blood, whole blood, buccal swab, DNA, RNA, protein, cell lines, plasma, serum, RBC, white cells, buffy coat, fluid, marrow, urine, stem cells, and solid tissue such as tumor, tumor and biopsy materials spanning all manner of common and rare pathologies and indications including Alzheimer's, basal cell carcinoma, bladder cancer, bone cancer, brain cancer, breast cancer, cerebrospinal fluid, amniotic fluid, colorectal cancer, colon cancer, hodgkins and non-hodgkins lymphoma, kidney/renal cancer, leukemia, liver cancer, lung cancer, melanoma, multiple sclerosis, myeloma neuroblastoma, neurodegenerative diseases, ovarian cancer, pancreatic cancer, prostate cancer, urinary cancer. This includes adult and pediatric indications. Specimen Central users specify a number of variables in their Specimen Requests, including preparation, preservation and handling requirements such as cryo-preserved, FFPE (Formalin-fixed paraffin-embedded), formalin, frozen, refrigerated, OCT, snap frozen, paraffin block, fresh, prospective, autopsy or cadaveric, etc. Many users require clinically annotated date associated with their specimens, as well as documentation of IRB or ethics committee approval and informed consents. For Researchers Most specimen databases require researchers to waste time and effort entering lengthy registrations and search queries that yield poor results, if anything. Specimen Central solves this problem by having tissue banks search for you. From years to months, months to weeks, and weeks to days, Specimen Central seeks to reduce delays and costs in the research & development life cycle by expediting connections between demand and supply. For Biobanks The capital costs of maintaining a biobank infrastructure are substantial and growing. Biobanks use Specimen Central as a marketing tool to augment their business development efforts. By routinely checking Specimen Central's Specimen Requests, biobanks can uncover market demand for their inventories and develop new connections and revenue streams to defray costs. Specimen Central supplements - not displaces - the efforts of your sales representatives, agents, brokers and commercial partners. | blood, tissue, cell, dna, rna, protein, body fluid, whole blood, buccal swab, cell line, plasma, serum, red blood cell, white cell, buffy coat, marrow, urine, stem cell, solid tissue, tumor, adult, pediatric, biopsy material, child, clinically annotated, clinical, annotated, tissue | is listed by: One Mind Biospecimen Bank Listing | All | The community can contribute to this resource | nlx_10317 | SCR_003536 | Specimen Central, SpecimenCentral | 2026-07-25 12:12:28 | 1 | ||||||
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LEAD-DBS Resource Report Resource Website 100+ mentions |
LEAD-DBS (RRID:SCR_002915) | software resource, software toolkit | MATLAB toolbox for deep-brain-stimulation (DBS) electrode reconstructions and visualizations based on postoperative MRI and computed tomography (CT) imaging. The toolbox also facilitates visualization of localization results in 2D/3D, analysis of DBS-electrode placement's effects on clinical results, simulation of DBS stimulations, diffusion tensor imaging (DTI) based connectivity estimates, and fiber-tracking from the VAT to other brain regions (connectomic surgery). | matlab, deep brain stimulation, structural mri, reconstruction, dwi, dti, volume of activated tissue, modeling, subcortical atlas, depression, mri, computed tomography, atlas application, simulation, diffusion mr fiber tracking, three dimensional display, two dimensional display, surface rendering, volume rendering, workflow, neuroimaging, data repository |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: SPM is related to: 3D Slicer is related to: Atlasing of the basal ganglia is related to: German Research Foundation has parent organization: Charite - Universitatsmedizin Berlin; Berlin; Germany |
Parkinson's disease, Dystonia, Depressive Disorder | DFG KFO 247 | Free, Available for download, Freely available | SciRes_000188 | http://www.nitrc.org/projects/lead-dbs | SCR_002915 | Lead-DBS, LEAD DBS, Lead DBS | 2026-07-25 12:12:25 | 213 | |||||
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Roswell Park Data Bank and BioRepository Resource Report Resource Website |
Roswell Park Data Bank and BioRepository (RRID:SCR_003607) | DBBR | biomaterial supply resource, material resource | Collects and provides de-identified biospecimens and associated epidemiological and clinical data to meet the scientific needs of investigators. Newly diagnosed patients are asked to contribute data and specimens to the DBBR prior to treatment. Other patients with who have benign disease or advanced disease and have undergone treatment are also enrolled based on anticipated use of data and samples for research. Additionally, non-patients (family members and friends of patients and community members) with no personal history of cancer are asked to participate in the biorepository as controls. Specimens and data are procured with protected health information (PHI) and de-identified prior to distribution to investigators with hypothesis driven IRB reviewed studies. An extensive data collection and management system is in place to track informed consent, questionnaire collection and follow up, epidemiological questionnaire data, clinical data, biospecimens and their derivatives. Research Services * Availability of a bank of prospectively collected blood specimens (serum, plasma, buffy coat, red blood cells and DNA) from cancer patients, high risk individuals and healthy controls for research. * Collection, linking and distribution of epidemiologic and clinical data with biospecimens. * Study-specific biospecimen and data procurement to meet the needs of individual studies, including: ** Participant identification, eligibility screening and informed consent ** Serial biospecimen procurement prior to and throughout treatment ** Study specific collection of biospecimens other than blood (buccal cells, sputum, and urine) ** Procurement and distribution of fresh biospecimens ** Collection of extended clinical and risk factor data | clinical data, epidemiologic data, cancer, control, benign cancer disease, advanced cancer, blood, serum, plasma, buffy coat, red blood cell, dna, high risk individual, healthy control, buccal cell, sputum, urine |
is listed by: One Mind Biospecimen Bank Listing has parent organization: Roswell Park Comprehensive Cancer Center |
Cancer, Control, Benign cancer, Advanced cancer, High risk individual, Healthy control | nlx_13096 | http://www.roswellpark.org/Prevention/Data_Bank_and_BioRepository | SCR_003607 | Roswell Park Cancer Institute DataBank and BioRepository, Roswell Park Cancer Institute Data Bank BioRepository, RPCI Data Bank BioRepository, Roswell Park Cancer Institute Data Bank and BioRepository, RPCI DataBank and BioRepository, RPCI DBBR, RPCI Data Bank and BioRepository, Roswell Park DataBank and BioRepository, Roswell Park Data Bank BioRepository | 2026-07-25 12:12:26 | 0 | ||||||
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Nuclear Receptor Signaling Atlas Resource Report Resource Website 100+ mentions |
Nuclear Receptor Signaling Atlas (RRID:SCR_003287) | NURSA | biomaterial supply resource, material resource | THIS RESOURCE IS NO LONGER IN SERVICE.Documented on February 25, 2022.Software tool as knowledge environment resource that accrues, develops, and communicates information that advances understanding of structure, function, and role in disease of nuclear receptors (NRs) and coregulators. It specifically seeks to elucidate roles played by NRs and coregulators in metabolism and development of metabolic disorders. Includes large validated data sets, access to reagents, new findings, library of annotated prior publications in field, and journal covering reviews and techniques.As of March 20, 2020, NURSA is succeeded by the Signaling Pathways Project (SPP). | nuclear receptor, coregulator, metabolism, metabolic disorder, type 2 diabetes, obesity, osteoporosis, lipid dysregulation, cardiovascular disease, oncology, regenerative medicine, environmental agent, genomics, proteomics, reagent, ligand, microarray, gene expression, data set, data analysis service, nuclear receptor signaling, signaling, high through put screening, receptor, ligand, journal, molecule, affinity purification, q-pcr, chip-chip, animal model, antibody, cell line, primer, transcriptomine, clinical trial, disease, drug, data set |
is used by: NIF Data Federation is used by: NIDDK Information Network (dkNET) is recommended by: National Library of Medicine lists: NURSA Transcriptomine lists: STRING lists: Nuclear Receptor Cistrome is listed by: NIH Data Sharing Repositories is listed by: NIDDK Research Resources is listed by: NIDDK Information Network (dkNET) is related to: dkCOIN is related to: Integrated Manually Extracted Annotation has parent organization: Baylor College of Medicine; Houston; Texas |
Metabolic disorder, Type 2 diabetes mellitus, Obesity, Osteoporosis, Lipid dysregulation, Cardiovascular disease, Diabetes, Cancer | NHLBI ; NIEHS ; NICHD ; NIDDK DK097748 |
DOI:10.1101/401729 | Free, Freely available | nif-0000-03208 | https://dknet.org/about/NURSA_Archive | http://www.nursa.org | SCR_003287 | NURSA - Nuclear Receptor Signaling Atlas, NURSA - The Nuclear Receptor Signaling Atlas | 2026-07-25 12:12:25 | 135 | ||
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Toolbox at the European Bioinformatics Institute Resource Report Resource Website 50+ mentions |
Toolbox at the European Bioinformatics Institute (RRID:SCR_002872) | software resource, software toolkit | The European Bioinformatics Institute (EBI) toolbox area provides a comprehensive range of tools for the field of bioinformatics. These are subdivided into categories in the left menu for convenience. EBI has developed a large number of very useful bioinformatics tools. A few examples include: - Similarity & Homology - the BLAST or FASTA programs can be used to look for sequence similarity and infer homology. - Protein Functional Analysis - InterProScan can be used to search for motifs in your protein sequence. - Proteomic Services NEW - UniProt DAS server allows researchers to show their research results in the context of UniProtKB/Swiss-Prot annotation. - Sequence Analysis - ClustalW2 a sequence alignment tool. - Structural Analysis - MSDfold can be used to query your protein structure and compare it to those in the Protein Data Bank (PDB). - Web Services - provide programmatic access to the various databases and retrieval/analysis services EBI provides. - Tools Miscellaneous - Expression Profiler a set of tools for clustering, analysis and visualization of gene expression and other genomic data. Sponsors: This resource is sponsored by EBI. | expression, functional, gene, bioinformatics, database, genomic, homology, protein, proteomic, sequence, structural, toolbox | has parent organization: European Bioinformatics Institute | Free | nif-0000-25553 | SCR_002872 | EBI Bioinformatics Tools | 2026-07-25 12:12:25 | 85 | ||||||||
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Childhood Autism Spectrum Test Resource Report Resource Website 10+ mentions |
Childhood Autism Spectrum Test (RRID:SCR_003322) | CAST | assessment test provider, material resource | Assessment test developed by the Autism Research Centre at the University of Cambridge, for assessing the severity of autism spectrum symptoms in children. This assessment is usually used with children aged from 4-11 years of age. | child, young human | Pervasive Development Disorder, Autism | Free, Freely available | nlx_157819 | http://www.moodychild.com/uploads/3/0/8/9/3089108/cast_autism.pdf | SCR_003322 | Childhood Autism Spectrum Test (CAST), Childhood Asperger''s Syndrome Test | 2026-07-25 12:12:27 | 22 | ||||||
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EDAR study: biomarkers for Alzheimer's disease Resource Report Resource Website 1+ mentions |
EDAR study: biomarkers for Alzheimer's disease (RRID:SCR_004445) | EDAR | biomaterial supply resource, material resource | A European collaborative study to develop and validate new biomarkers for Alzheimer's disease. Central in the project is the development of an assay for the measurement of beta amyloid oligomers in cerebrospinal fluid and plasma. In order to validate the assay for beta amyloid oligomers, cerebrospinal fluid and plasma will be repeatedly collected in subjects with Alzheimer's disease, other types of dementia, mild cognitive impairment, and control subjects. | portal, biomaterial supply resource, beta amyloid oligomer, alzheimer's disease, dementia, mild cognitive impairment, control subject, cerebral spinal fluid, plasma, serum |
is listed by: One Mind Biospecimen Bank Listing has parent organization: VU University; Amsterdam; Netherlands |
Alzheimer's disease, Dementia, Mild Cognitive Impairment | European Union FP6 | Consortium members | nlx_143737 | SCR_004445 | Early Diagnosis of AD and as marker of treatment response, Early Diagnosis of AD and as marker of treatment response (EDAR study), EDAR study, EDAR study: biomarkers for Alzheimer's disease | 2026-07-25 12:12:31 | 2 |
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Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
