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https://www.uke.de/index.html

Teaching hospital of University of Hamburg located in Eppendorf, Hamburg, Germany.

Proper citation: University Medical Center Hamburg-Eppendorf (RRID:SCR_017156) Copy   

•   Source: SciCrunch Registry

https://inscopix.com/nvista-system/

Miniature microscope for imaging calcium activity in neural circuits by Inscopix, Inc.

Proper citation: iNSCOPIX: nVista (RRID:SCR_017407) Copy   

•   Source: SciCrunch Registry

https://medicine.ecu.edu/core-imaging/wp-content/pv-uploads/sites/288/2019/10/lsm-700-quick-guide.pdf

Laser scanning confocal microscope designed for high-quality imaging of biological and material samples. Member of the seventh generation of confocal microscopes from Carl Zeiss. Point scanning confocal microscope., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

Proper citation: Zeiss: LSM 700 microscope (RRID:SCR_017377) Copy   

•   Source: SciCrunch Registry

http://www.suiplus.com

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on December 1, 2023. System developed under guidance of experts in reproduction and andrology from Andrological Branch of Chinese Medical Association and Research Institute of National Health Planning Commission. Designed according to standard of 5th edition of World Health Organization laboratory manual for examination and processing of human semen.

Proper citation: Suiplus: SSA-II sperm analysis system (RRID:SCR_017387) Copy   

•   Source: SciCrunch Registry

https://brainreader.net

Developer of medical software to offer image analysis technologies. Company in Denmark that provides medical image processing software to get quantifiable and accurate insight into brain.

Proper citation: Brainreader (RRID:SCR_017308) Copy   

•   Source: SciCrunch Registry

http://promoter.bx.psu.edu/hi-c/

Genome Browser for study of 3D genome organization and gene regulation and data visualization. Used to visualizing chromatin interaction data, browse other omics data such as ChIP-Seq or RNA-Seq for same genomic region, and gain complete view of both regulatory landscape and 3D genome structure for any given gene., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

Proper citation: 3D Genome (RRID:SCR_017525) Copy   

•   Source: SciCrunch Registry

https://imotions.com/hardware/smi-red500/

Screen based eye tracker that combines high-speed capabilities at 500 Hz.

Proper citation: IMOTIONS: SMI RED500 Eye Tracker (RRID:SCR_017586) Copy   

•   Source: SciCrunch Registry

https://www.leicabiosystems.com/histology-equipment/cryostats/leica-cm1520/

Cryostat for routine histology and cryosectioning including critical applications such as Mohs surgery. Brain sectioning. Actively cooled quick freezing shelf with defrost function and refrigeration system are provided.

Proper citation: Leica: CM1520 Cryostat (RRID:SCR_017543) Copy   

•   Source: SciCrunch Registry

http://sourceforge.net/projects/mirplant/

A user-friendly plant miRNA prediction tool.

Proper citation: miRPlant (RRID:SCR_012105) Copy   

•   Source: SciCrunch Registry

http://pypedal.sourceforge.net/

A pedigree analysis software package that provides tools for error checking, mathematical analysis, report generation, pedigree simulation, and data visualization.

Proper citation: PyPedal (RRID:SCR_012104) Copy   

•   Source: SciCrunch Registry

http://sourceforge.net/projects/sat-assembler/

A targeted gene assembly software program which aims to recover gene families of particular interest to biologists.

Proper citation: SAT-Assembler (RRID:SCR_012108) Copy   

•   Source: SciCrunch Registry

http://sourceforge.net/projects/fingerid/

A metabolite identification software using tandem mass spectrometry and kernel methods.

Proper citation: FingerID (RRID:SCR_012077) Copy   

•   Source: SciCrunch Registry

https://code.google.com/p/chibe/

An editing and visualization software tool for pathway models represented by the BioPAX format, using SBGN Process Description Language, based on Chisio.

Proper citation: ChiBE (RRID:SCR_012110) Copy   

•   Source: SciCrunch Registry

http://sourceforge.net/projects/protrac/

A software which detects and analyses piRNA clusters based on quantifiable deviations from a hypothetical uniform distribution regarding the decisive piRNA cluster characteristics.

Proper citation: proTRAC (RRID:SCR_012078) Copy   

•   Source: SciCrunch Registry

https://code.google.com/p/moabs/

Software providing a complete, accurate and efficient solution for analysis of large scale base-resolution DNA methylation data, bisulfite sequencing or single molecule direct sequencing.

Proper citation: MOABS (RRID:SCR_012071) Copy   

•   Source: SciCrunch Registry

http://sourceforge.net/projects/netmode/

Fast motif detection algorithm for subgraph size no more than 6.

Proper citation: NetMODE (RRID:SCR_012085) Copy   

•   Source: SciCrunch Registry

http://www.bioinf.jku.at/software/fabia/fabia.html

A model-based technique for biclustering that is clustering rows and columns simultaneously.

Proper citation: FABIA (RRID:SCR_012002) Copy   

•   Source: SciCrunch Registry

http://www.aphl.org/Pages/default.aspx

Works to strengthen laboratories serving the public''s health in the US and globally.

Proper citation: APHL (RRID:SCR_012001) Copy   

•   Source: SciCrunch Registry

https://code.google.com/p/spinal/

Algorithm for the problem of globally aligning a pair of protein-protein interaction (PPI) networks.

Proper citation: SPINAL (RRID:SCR_012080) Copy   

•   Source: SciCrunch Registry

http://sourceforge.net/projects/mcdl/

A small Java molecular viewer/editor for chemical structures, stored in Modular Chemical Descriptor Language linear notation.

Proper citation: MCDL (RRID:SCR_012084) Copy   

•   Source: SciCrunch Registry