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https://www.thermofisher.com/us/en/home/technical-resources/software-downloads/dataassist-software.html

Data analysis tool that utilizes the Comparative CT (ddCT) method to rapidly and accurately quantitate relative gene expression across a large number of genes and samples. Raw input from plates or arrays can be analyzed according to user-determined settings.

Proper citation: DataAssist (RRID:SCR_014969) Copy   

•   Source: SciCrunch Registry

https://brics.cit.nih.gov

Modular, web-based bioinformatics system for research studies and clinical trials data collection. Tools include a data dictionary, data repository, meta study, global unique identifiers for studies, protocol management and data capture, and query and exportation of data.

Proper citation: NIH Brics (RRID:SCR_015028) Copy   

•   Source: SciCrunch Registry

http://iiif.io/#plug-’n’-play-software

Set of shared application programming interface specifications for interoperable functionality in digital image repositories. It utilizes JSON-LD, linked data, and standard W3C web protocols to parse and share digital image data, migrate across technology systems, and provide enhanced image access.

Proper citation: International Image Interoperability Framework (RRID:SCR_015029) Copy   

•   Source: SciCrunch Registry

https://sourceforge.net/projects/soapdenovo2/files/GapCloser/

Module of SOAPdenovo2 commonly used independently to close gaps in genome assemblies.

Proper citation: GapCloser (RRID:SCR_015026) Copy   

•   Source: SciCrunch Registry

http://www.nitrc.org/projects/gscca_2013/

Group Sparse Canonical Correlation Analysis is a method designed to study the mutual relationship between two different types of data.

Proper citation: Group Sparse Canonical Correlation Analysis (RRID:SCR_014977) Copy   

•   Source: SciCrunch Registry

https://drososhare.net/

Website resource for researchers to order and send Drosophilia specimens to each other. This community-driven supplier also works with the FlyBase Drosophilia database to search for synonyms for fly species.

Proper citation: Drososhare (RRID:SCR_014976) Copy   

•   Source: SciCrunch Registry

http://www.synergy.com/wordpress_650164087/

Data analysis, graphing, and management application that allows users to import, manipulate, analyze data, and create customized plots. Plots include x-y probability, histogram, box, percentile, horizontal bar, stack bar, column, stack column, polar, and pie. Binned data can be exported to a histogram, step plot, or spike plot. KaleidaGraph works with Windows and Macintosh systems., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

Proper citation: KaleidaGraph (RRID:SCR_014980) Copy   

•   Source: SciCrunch Registry

http://aldconnect.org

Group whose goal is to improve health outcomes for individuals with X-linked adrenoleukodystrophy by raising disease awareness, improving education, providing support for and information to patients, and performing clinical ALD research.

Proper citation: ALD Connect (RRID:SCR_015035) Copy   

•   Source: SciCrunch Registry

http://research.ics.aalto.fi/ica/icasso/

Software implementing a method for assessing both the algorithmic and statistical reliability of estimated independent components developed by Himburg et al in their 2004 paper. The method is based on running the ICA algorithm many times with slightly different conditions and visualizing the clustering structure of the obtained components in the signal space. In experiments with magnetoencephalographic (MEG) and functional magnetic resonance imaging (fMRI) data, the method was able to show that expected components are reliable; furthermore, it pointed out components whose interpretation was not obvious but whose reliability should incite the experimenter to investigate the underlying technical or physical phenomena.

Proper citation: ICASSO (RRID:SCR_014981) Copy   

•   Source: SciCrunch Registry

http://www.oif.org

Foundation for improving the quality of life for people affected by OI through treatment and cure research, education, awareness, and mutual support. OIF lists personal resources for individuals affected by osteogenesis imperfecta as well as professional and clinical resources for researchers.

Proper citation: Osteogenesis Imperfecta Foundation (RRID:SCR_015034) Copy   

•   Source: SciCrunch Registry

https://navicom.curie.fr/bridge.php#annotations:PT_4rBJREee_ZQ_lDQNM7A

Web application which allows users to create interactive molecular network portraits using high-throughput datasets.

Proper citation: NaviCom (RRID:SCR_015039) Copy   

•   Source: SciCrunch Registry

http://www.northernspalting.com/workshops-and-materials/buy-fungi/

Supplier of non-toxic, pure-culture fungi through Oregon State University which are kept active in the lab. All organisms arrive in an aggressive, pigmenting state. It's website also features scientific information on spalting, DIY guides, lists of upcoming spalting events, and a menagerie of other spalting resources.

Proper citation: Northern Spalting - Applied Mycology Lab (RRID:SCR_014945) Copy   

•   Source: SciCrunch Registry

http://www.alohaculturebank.com/about.html#.WKzBohIrL-Y

Producer and supplier of organic medicinal mushrooms and medicinal mushroom products. Its product line includes raw materials and private label products for pharmaceutical and nutraceutical use, as well as its own branded line of "Condition Specific" dietary supplements available to the public.

Proper citation: Aloha Medicinals (RRID:SCR_014943) Copy   

•   Source: SciCrunch Registry

http://www.archerfarmsinc.com/

Producer and supplier of swine and sheep for research purposes. Archer Farms delivers its specimens directly to research facilities throughout the East Coast.

Proper citation: Archer Farms (RRID:SCR_014948) Copy   

•   Source: SciCrunch Registry

http://arofish.us/

Supplier of laboratory-reared and field-collected freshwater, marine, and estuarine organisms. Invertebrates and vertebrates are available, and seasonal and unlisted organisms can be requested. Its test organisms are available for environmental and biomedical research.

Proper citation: Aquatic Research Organisms (RRID:SCR_014946) Copy   

•   Source: SciCrunch Registry

https://www.cdc.gov/labstandards/index.html

Standardization program which helps assure the quality of laboratory test data and results so patients, healthcare providers, researchers, and public health officials can be confident that laboratory test results they receive are accurate. CDC services include reference materials, proficiency testing, training, guideline creation, and consultations. Quality assurance and standardization programs can be can be customized by and for users and laboratories.

Proper citation: CDC Laboratory Quality Assurance and Standardization Programs (RRID:SCR_015000) Copy   

•   Source: SciCrunch Registry

http://biobreeders.com/

Developer of specialized and appropriate hamster models for research on human diseases. These specialized hamsters have features similar to those seen in certain human diseases. Bio Breeders provides these specialized hamsters to the biomedical community worldwide.

Proper citation: Bio Breeders (RRID:SCR_014951) Copy   

•   Source: SciCrunch Registry

http://pituitary.org

International non-profit organization for patients, relatives, and physicians with pituitary tumors and disorders.

Proper citation: Pituitary Network Association (RRID:SCR_015006) Copy   

•   Source: SciCrunch Registry

http://www.nadf.us

Foundation to support research in and diagnosis of adrenal diseases. The portal provides basic information about adrenal diseases as well as a community for patients.

Proper citation: National Adrenal Diseases Foundation (RRID:SCR_015007) Copy   

•   Source: SciCrunch Registry

http://www.mccauslandcenter.sc.edu/crnl/tools/asl

Collection of analysis scripts for pCASL (pseudo-Continuous ASL) data.

Proper citation: pCASL Analysis (RRID:SCR_015004) Copy   

•   Source: SciCrunch Registry