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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Thermo Fisher: Applied Biosystems: QuantStudio 12K Flex RealTime PCR System
 
Resource Report
Resource Website
10+ mentions
Thermo Fisher: Applied Biosystems: QuantStudio 12K Flex RealTime PCR System (RRID:SCR_021098) instrument resource System can simultaneously run up to four 3072 reaction QuantStudio 12K Flex OpenArray plates in about four hours. When combined with the QuantStudio 12K Flex OpenArray AccuFill System, can produce up to 110000 data points or more in 8 hour day. Has touch screen interface and comprehensive software analysis tools for gene expression, genotyping, and digital PCR increase productivity. Has five interchangable block formats including: OpenArray plate, TaqMan Array card, 384-well, and 96-well (0.1 and 0.2 mL). Real Time PCR System, QuantStudio 12K Flex OpenArray, instrument, equipment, USEDit uses: Applied Biosystems QuantStudio 12K Flex RT PCR Software Commercially available SCR_021098 QuantStudio 12K Flex Real-Time PCR System 2026-07-25 12:09:41 14
BioSpherix: ProOx C21 Controller
 
Resource Report
Resource Website
1+ mentions
BioSpherix: ProOx C21 Controller (RRID:SCR_021131) C21 instrument resource Compact O2 and CO2 Subchamber Controller used together with C-Chamber Incubator Subchamber from BioSpherix or chambers from other manufacturers. Compact controller, Oxygen controller, CO2 controller, Subchamber Controller, BioSpherix, instrument, equipment, USEDit is listed by: USEDit Commercially Available Model_Number_ProOx C21 SCR_021131 ProOx C21, ProOx C21 Oxygen and Carbon Dioxide Subchamber Controller 2026-07-25 12:09:42 1
BioSpherix: ProOx 360 Controller
 
Resource Report
Resource Website
1+ mentions
BioSpherix: ProOx 360 Controller (RRID:SCR_021130) P360 instrument resource Versatile high infusion rate O2 controller.Controls Oxygen and may be used with BioSpherix C-Chamber Incubator Subchamber, C-Shuttle Glove Box, I-Glove Incubator Glove Box, Xvivo System Model X3 Cytocentric Cell Incubation and Handling Platfrom, or A-Chamber Animal Chamber. Featuring capability to infuse gas over range 1-140 SCFH, may be used together with chambers which are either home built or are available from other manufacturers. Versatile high infusion rate O2 controller, O2 controller, Oxygen controller, BioSpherix, instrument, equipment, USEDit is listed by: USEDit Commercially Available Model_Number_ProOx 360 SCR_021130 ProOx 360 High Infusion Rate O2 Controller, ProOx 360 2026-07-25 12:09:41 3
Multilayer Connectome of Caenorhabditis elegans
 
Resource Report
Resource Website
Multilayer Connectome of Caenorhabditis elegans (RRID:SCR_021009) data or information resource Networks of extrasynaptic aminergic and peptidergic interactions in C. elegans Networks, extrasynaptic aminergic interactions, peptidergic interactions, C.Elegans DOI:10.1371/journal.pcbi.1005283 Free, Freely available SCR_021009 2026-07-25 12:09:39 0
BioSpherix: ProOx 110 Controller
 
Resource Report
Resource Website
1+ mentions
BioSpherix: ProOx 110 Controller (RRID:SCR_021129) P110, ProOx 110 instrument resource Compact, versatile O2 controller.Controls Oxygen and may be used with either C-Chamber Incubator Subchamber or A-Chamber Animal Chamber from BioSpherix. May be used with home-built or other manufacturers chambers. Compact O2 controller, controls Oxygen, BioSpherix, instrument, equipment, USEDit is listed by: USEDit Commercially Available Model_Number_ProOx 110 SCR_021129 BioSpherix ProOx 110 Compact O2 Controller 2026-07-25 12:09:41 3
BioSpherix: ProCO2 120 Controller
 
Resource Report
Resource Website
1+ mentions
BioSpherix: ProCO2 120 Controller (RRID:SCR_021127) P120 instrument resource Controls CO2 levels for most physiologic concentrations and may be connected with either C-Chamber Incubator Subchambers or A-Chamber Animal Chambers from BioSpherix. May also be connected with chambers which are either home built or are available from other manufacturers. These include thermal incubators, flush boxes, culture chambers, glove boxes, and other semi sealed enclosures. CO2 levels control, physiologic concentrations, BioSpherix, instrument, equipment, USEDit is listed by: USEDit Commercially available Model_Number_ProCO2 120 SCR_021127 ProCO2 120, ProCO2 120 Compact CO2 Controller, ProCO2 120 Compact Controller 2026-07-25 12:09:41 2
BioSpherix: OxyCycler AT82NN Controller
 
Resource Report
Resource Website
BioSpherix: OxyCycler AT82NN Controller (RRID:SCR_021188) OxyCycler AT82NN instrument resource Provides either dynamic or static control of parts per million levels of nitric oxide (NO) and limits the undesirable elevation NO2 in animal models when used in combination with either one or two (1 or 2) A-Chamber Animal Chambers. Nitric Oxide, Animal Chamber Controller, NO2 Limit Control, BioSpherix, USEDit is listed by: USEDit Commercially Available Model_Number_AT82NN SCR_021188 OxyCycler AT82NN Nitric Oxide Animal Chamber Controller with NO2 Limit Control 2026-07-25 12:09:43 0
Traefik
 
Resource Report
Resource Website
1+ mentions
Traefik (RRID:SCR_021221) software resource Software tool based on open source solutions to make deploying microservices easy. Used for deployment of modern IT environments. Allows to expose applications to network in dynamic environment.Traefik Stack by Traefik Labs Inc. as cloud native stack to help enterprises manage their entire network across data centers, on-premises servers and public clouds.Tools options include Traefik Proxy,Traefik Enterprise,Traefik Mesh,Traefik Pilot. HTTP reverse proxy, load balancer, Golang, deploying microservices, Traefik Labs Inc, expose applications to network, dynamic environment Restricted https://github.com/traefik, https://github.com/traefik/traefik SCR_021221 2026-07-25 12:09:43 2
BioSpherix: OxyCycler AT42N Controller
 
Resource Report
Resource Website
BioSpherix: OxyCycler AT42N Controller (RRID:SCR_021187) OxyCycler AT42N instrument resource Provides either dynamic or static control of parts per million levels of nitric oxide (NO) in animal models modeling when used in combination with either one or two (1 or 2) A-Chamber Animal Chambers. Nitric Oxide, Animal Chamber Controller, BioSpherix, USEDit is listed by: USEDit Commercially Available Model_Number_AT42N SCR_021187 OxyCycler AT42N Nitric Oxide Animal Chamber Controller 2026-07-25 12:09:42 0
BioSpherix: OxyCycler A41OV Controller
 
Resource Report
Resource Website
BioSpherix: OxyCycler A41OV Controller (RRID:SCR_021182) OxyCycler A41OV instrument resource Provides either dynamic or static control of O2 condition for animal modeling when used in combination with A-Chamber Animal Chamber. Controller, O2 control, A-Chamber Animal Chamber, USEDit, BioSpherix is listed by: USEDit Commercially Available Model_Number_A41OV SCR_021182 OxyCycler A41OV, A41OV OxyCycler A41OV Dynamic O2 Animal Chamber Controller 2026-07-25 12:09:41 0
BioSpherix: OxyCycler A42OC Controller
 
Resource Report
Resource Website
BioSpherix: OxyCycler A42OC Controller (RRID:SCR_021183) OxyCycler A42OC instrument resource Provides either dynamic or static control of O2 and CO2 conditions for animal modeling when used in combination with one or two A-Chamber Animal Chamber(s). O2 control, CO2 control, Animal Chamber, USEDit, BioSpherix is listed by: USEDit Commercially Available Model_Number_A42OC SCR_021183 OxyCycler A42OC Controller 2026-07-25 12:09:42 0
GMSH
 
Resource Report
Resource Website
10+ mentions
GMSH (RRID:SCR_021226) software resource Open source software tool as 3D finite element grid generator with build in CAD engine and post processor. Provides meshing tool with parametric input and advanced visualization capabilities. Built around geometry, mesh, solver and post processing modules.Specification of any input to these modules is done either interactively using graphical user interface, in ASCII text files using Gmsh own scripting language (.geo files), or using C plus plus, C, Python or Julia Application Programming Interface. 3D finite element grid generator, CAD engine build in, post processor, meshing tool Free, Available for download, Freely available https://gitlab.onelab.info/gmsh/gmsh SCR_021226 2026-07-25 12:09:43 16
BioSpherix: A-Chamber
 
Resource Report
Resource Website
1+ mentions
BioSpherix: A-Chamber (RRID:SCR_021177) A-Chamber, A-Chamber Animal Cage Enclosure instrument resource Animal Cage Enclosures for use in in vivo models that require control of experimental gases such as O2, CO2, NO, or CO. May be used together with gas controllers from BioSpherix. Chamber is outfitted with adjustable ventilation holes which permit ventilation of animal vapors and gases while simultaneously ensuring stable control of experimental conditions within. Available in three standard sizes. Animal Cage Enclosures, control of experimental gases, chamber adjustable ventilation holes, BioSpherix Ltd. Commercially Available SCR_021177 2026-07-25 12:09:42 2
ALLMAPS
 
Resource Report
Resource Website
1+ mentions
ALLMAPS (RRID:SCR_021171) software resource Software tool for computing scaffold ordering that maximizes colinearity to collection of maps, including genetic, physical or comparative maps into final chromosome build.Robust scaffold ordering based on multiple maps. Scaffold ordering, maps collection, genetic maps, physical maps, comparative maps, chromosome build Fujian 100 Talent Plan award ;
Gordon and Betty Moore Foundation ;
National Science Foundation DBI 0735191;
National Science Foundation DBI 1265383
PMID:25583564 Free, Available for download, Freely available SCR_021171 2026-07-25 12:09:42 4
BioSpherix: Biological Safety Hood
 
Resource Report
Resource Website
BioSpherix: Biological Safety Hood (RRID:SCR_021206) instrument resource Hood holds any animal lab chambers while continuously sweeping all experiment related off gases away.Used to capture and exhaust gases or vapors which escape from animal chamber and directs them to safe location.Helps to control animal odor in the lab. Available in standard and customized dimensions. Safety hood, animal chambers, capture gases, exhaust gases, BioSpherix, instrument, equipment, USEDit is listed by: USEDit Commercially Available SCR_021206 Safety Hood, Safety Hood for Animal Chambers 2026-07-25 12:09:42 0
Noldus: CatWalk XT
 
Resource Report
Resource Website
10+ mentions
Noldus: CatWalk XT (RRID:SCR_021262) instrument resource Gait analysis system for quantitative assessment of footfalls and locomotion in rats and mice. System includes corridor that directs free movement in straight line, hardened glass walkway that enables CatWalk XT Illuminated Footprints technology,high speed color camera for spatial and temporal resolution, CatWalk XT software for recording and automated analysis of locomotor ability of rodents. CatWalk XT, gait analyses, gait analysis system, instrument, equipment, USEDit is listed by: USEDit Commercially available SCR_021262 CatWalk XT, Noldus 2026-07-25 12:09:43 12
Leica: Aperio AT2 scanner
 
Resource Report
Resource Website
10+ mentions
Leica: Aperio AT2 scanner (RRID:SCR_021256) instrument resource Digital whole slide scanner.400 slide capacity brightfield scanner. High throughput with small footprint. 2x3 slide option available.Aperio AT2 runs on Microsoft Windows 10 operating system. Digital whole slide scanner, scanner, instrument, equipment, USEDit is listed by: USEDit Model_Number_Aperio_AT2 SCR_021256 Aperio AT2 2026-07-25 12:09:43 20
MatNWB
 
Resource Report
Resource Website
MatNWB (RRID:SCR_021156) software resource Software Matlab interface for reading and writing Neurodata Without Borders (NWB) 2.0 files. reading NWB files, writing NWB files, Neurodata Without Borders, NWB 2.0 files is listed by: Neurodata Without Borders
is related to: HDMF Common Schema
Free, Available for download, Freely available https://www.nwb.org/tools/, https://github.com/NeurodataWithoutBorders/matnwb SCR_021156 matnwb 2026-07-25 12:09:41 0
TailTimer
 
Resource Report
Resource Website
1+ mentions
TailTimer (RRID:SCR_021277) instrument resource Device for automating tail immersion assay. Used for measuring acute thermal pain in rodents. Software recognizes several specific RFID keys as user interface commands, which allows TailTimer to be operated via RFID fobs. Automating tail immersion assay, measuring acute thermal pain, pain in rodents, thermal pain SCR_021277 2026-07-25 12:09:44 1
Bash
 
Resource Report
Resource Website
10+ mentions
Bash (RRID:SCR_021268) software resource GNU Project shell. Sh-compatible shell that incorporates useful features from Korn shell (ksh) and the C shell (csh). Improvements offered by Bash include command-line editing, unlimited size command history,job control,shell functions and aliases,indexed arrays of unlimited size,integer arithmetic in any base from two to sixty four. GNU Project shell, command-line editing, unlimited size command history, job control, shell functions and aliases, indexed arrays of unlimited size, integer arithmetic Free, Freely available SCR_021268 Bourne Again SHell 2026-07-25 12:09:43 12

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