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URL: https://github.com/grenaud/SAFARI
Proper Citation: SAFARI (RRID:SCR_026028)
Description: C++ software program for alignment of ancient DNA to a pangenome reference graph. Used to recover more alignments from ancient DNA samples, which suffer from characteristic substitution patterns due to chemical damage.
Abbreviations: SAFARI
Synonyms: Sensitive Alignments from a RYmer Index
Resource Type: software application, source code, software resource
Defining Citation: PMID:39415996
Keywords: Pangenomics, ancient DNA, alignment, recover alignments from ancient DNA samples, characteristic substitution patterns, chemical damage,
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