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Proper Citation: Cell Ranger (RRID:SCR_017344)
Description: Software tool as set of analysis pipelines that process chromium single cell RNA-seq output to align reads, generate feature-barcode matrices and perform clustering and gene expression analysis by 10xGenomics.
Resource Type: data analysis software, data processing software, software application, software resource
Keywords: Analysis, process, chromium, singe, cell, RNA-seq, align, read, barcode, matrice, clustering, gene, expression, 10xGenomics
Availability: Restricted
Resource Name: Cell Ranger
Resource ID: SCR_017344
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Collaborating for the Advancement of Interdisciplinary Research in Benign Urology |
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
