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URL: https://bitbucket.org/mugqic/genpipes/src/master/
Proper Citation: GenPipes (RRID:SCR_016376)
Description: Software for genomics and bioinformatics analysis. GenPipes includes several python pipelines that cover many genomics applications, such as RNASeq, ChIPSeq, DNASeq, WGBS, HiC, Metagenomics, PacBio assembly, etc.
Resource Type: data analysis software, data processing software, software application, software resource
Keywords: workflow, management, system, genomics, bioinformatics, rnaseq, chipseq, dnaseq, hic, metagenomics, WGBS, PacBio, Assembly, C3G
Availability: Free, Available for download, Tutorial available
Resource Name: GenPipes
Resource ID: SCR_016376
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
