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URL: https://cell-innovation.nig.ac.jp/maser/Tools/visualization_top_en.html
Proper Citation: loadGtfToGe_db (RRID:SCR_015998)
Description: One stop platform for NGS big data from analysis to visualization. There are about 400 analysis pipelines integrated on Maser. List of all analysis pipelines, including descriptions and approximate execution times, can be found on page for ‘All pipelines’ in the User Guide. loadGtfToGe_db software loads GTF files to a database for Genome Explorer. It allows the user to browse the results through the GE.
Synonyms: Management and Analysis System for Enormous Reads: loadGtfToGe_db
Resource Type: data processing software, data visualization software, software application, software resource
Keywords: analysis, pipeline, maser, genome, explorer, upload, database, browse
Funding: Ministry of Education ; Culture ; Sports ; Science and Technology ; Japan
Availability: Restricted
Resource Name: loadGtfToGe_db
Resource ID: SCR_015998
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
