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URL: https://github.com/pezmaster31/bamtools/wiki
Proper Citation: Bamtools (RRID:SCR_015987)
Description: Software that provides both a C++ API and a command-line toolkit for reading, writing, and manipulating genome sequence alignment files in the BAM and SAM formats. It is used for research analysis and management of data produced by sequencing technologies.
Synonyms: API:Application Programming Interface, BAM:Binary Alignment Map, SAM:Sequence Alignment Map
Resource Type: data analysis software, data management software, data processing software, software application, software resource, software toolkit
Defining Citation: PMID:21493652, DOI:10.1093/bioinformatics/btr174
Keywords: c++, api, sam, bam genome, sequence, alignment, data, analysis, management, command, manipulation, binary, map, bio.tools
Funding: NHGRI R01 HG004719; NHGRI RC2 HG005552
Resource Name: Bamtools
Resource ID: SCR_015987
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
