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URL: https://code.google.com/p/ghostm/
Proper Citation: GHOSTM (RRID:SCR_000062)
Description: Software homology search tool for huge short reads generated by next-generation sequencers.Can detect remote homologs like BLAST and is about 40 times more efficient than BLAST by using a GPU-computing technique.
Synonyms: GPU-based HOmology Search Tool for Metagenomics, ghostm: GPU-based HOmology Search Tool for Metagenomics
Resource Type: data analysis software, data processing software, software application, software resource
Defining Citation: PMID:22574135
Keywords: homology search, next-generation sequencers short reads, detect remote homologs,
Availability: Free, Available for download, Freely available,
Resource Name: GHOSTM
Resource ID: SCR_000062
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
Data set from Kravitz, Owen and Kretizer's 2012 paper "Optogenetic identification of striatal projection neuron subtypes during in vivo recordings."
