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Source
Ensembl
Collection of genome databases for vertebrates and other eukaryotic species with DNA and protein sequence search capabilities. Used to automatically annotate genome, integrate this annotation with other available biological data and make data publicly available via web. Ensembl tools include BLAST, BLAT, BioMart and the Variant Effect Predictor (VEP) for all supported species.
Details
- Resource Type: Resource, data analysis service, data access protocol, database, web service, production service resource, analysis service resource, catalog, service resource, software resource, data or information resource
- Keywords: collection, genome, dataset, database, vertebrate, eukaryotic, DNA, protein, sequence, search, automaticly, annotate, data, bio.tools
- Resource ID: SCR_002344
- Proper Citation: (Ensembl, RRID:SCR_002344)
- Parent Organization: European Bioinformatics Institute , Wellcome Trust Sanger Institute; Hinxton; United Kingdom
- Related Condition:
- Funding Agency: BBSRC, EMBL, European Union, FP6, FP7, MRC, NHGRI, Wellcome Trust
- Relation: related to: Ensembl Genomes, GermOnline, CandiSNPer, Human Splicing Finder, NGS-SNP, Sanger Mouse Resources Portal, DECIPHER, Ensembl Genomes, PeptideAtlas, AnimalTFDB, Bgee: a dataBase for Gene Expression Evolution, FlyMine, Rat Gene Symbol Tracker, UniParc at the EBI, go-db-perl, UniParc, G:Profiler, RIKEN integrated database of mammals, VBASE2, p300db, ShinyGO, used by: NIF Data Federation, Animal QTLdb, Monarch Initiative, ChannelPedia, Blueprint Epigenome, HmtPhenome, listed by: OMICtools, Biositemaps, re3data.org, LabWorm, bio.tools, Debian, works_with: Genotate, CellPhoneDB, Open Regulatory Annotation Database, Database of genes related to Repeat Expansion Diseases, TarBase
- Reference: PMID:24316576, PMID:23203987
- Website Status: Last checked up
- Alternate IDs: nif-0000-21145, OMICS_01647, biotools:ensembl
- Alternate URLs: https://bio.tools/ensembl
- Old URLs:
- v_uuid: 85aa923e-e074-5fd9-94e6-eb1e13ba0ac4
