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dkNET community events and announcements in June, 2017

Dear dkNET Community,

dkNET provides updates on activities of interest to the NIDDK-supported community. You could keep up to date on these activities through our Twitter feed @dkNET_info, through our Community Calendar, or through dkNET e-mail list. If you have an event or funding opportunities you'd like to advertise, please contact us info_at_dknet.org.


dkNET Updates:  

  • New data view: Omics Discovery Index: Datasets 

https://dknet.org/Data/Functional%20Genomics%20Study/source/SCR_010494-1/search?q=%2A&l= 

The Omics Discovery Index (OmicsDI) contains transcriptomics, genomics, proteomics and metabolomics data. 


  • dkNET Use Case Survey What do you think dkNET should do next? Please let us know your thoughts! Your opinions and suggestions are very important to us in helping dkNET to develop better tools for scientific community. Please submit your response before June 12, 2017. Thank you! Survey link: https://www.surveymonkey.com/r/usecase17
  • Join dkNET-NURSA Challenge NOW! Remember to submit the worksheet before June 16, 2017 to receive a $50 VISA gift card and for your chance to win $500. For more information, check out our challenge page, FAQs, and information webinar It's a fun way to learn how to use dkNET and also win big prize! Please feel free to invite your colleagues, graduate students, and postdocs to join the challenge. 


Events in June, 2017

June 1, 2017

Registration deadline: Biliary Atresia: A Clinical and Translational Science Research Workshop 

The purpose of this meeting will be to bring together clinical and translational experts in biliary atresia to examine the current state of clinical and translational science that will allow for the identification and prioritization of achievable and feasible research priorities that will further advance the understanding of the clinical pathophysiology of this condition. Further details regarding the agenda, date and location of this meeting will be forthcoming on this website. The meeting will be held on June 28, 2017.

Location: Bethesda, MD

More information: https://www.niddk.nih.gov/news/events-calendar/Pages/biliary-atresia-clinical-translational-workshop.aspx

June 9, 2017

dkNET Data Searchathon 

dkNET is hosting a Data Searchathon at UCSD Campus on Friday, June 9, 2017. We invite all students, postdocs, faculty, or staff to join this event. Programming skills are not required. If you know how to browse internet, you are qualified! It only takes 20 min to attend a session. A $25 VISA gift card will be given to the participant and pizza will be served, too!

More information:  https://dknet.org/about/blog/922


June 9-13, 2017

77th Annual American Diabetes Association (ADA) Scientific Sessions 

The Scientific Sessions offers researchers and health care professionals the unique opportunity to share ideas and learn about the significant advances in diabetes research, treatment, and care. Over the course of five days, participants will receive exclusive access to more than 3,000 original research presentations, take part in provocative and engaging exchanges with leading diabetes experts and expand professional networks with over 13,000 professional attendees from around the world. The program will start on Friday, June 9 at 11:30 a.m. with our Mini-Symposia Sessions, and conclude on Tuesday, June 13 at 11:45 a.m. following the ADA Presidents Oral Session.

More information:  http://professional.diabetes.org/meeting/scientific-sessions/77th-scientific-sessions


June 13-14, 2017

NIDDK Workshop: Workshop on Best Practices for Studies of Diet and the Intestinal Microbiome

The purpose of this workshop is to improve rigor and reproducibility in research on the colonic microbiome, identify important dietary information that should be reported and parameters to consider in design of studies, particularly for clinical studies on diet and the intestinal microbiome. A summary for the research community will be published in a peer-reviewed journal.

Location: Bethesda, MD

More information: https://www.niddk.nih.gov/news/events-calendar/Pages/workshop-best-practices-studies-diet-intestinal-microbiome.aspx


June 15-16, 2017

Training Workshop: Microbiome Analysis in the Cloud

This is an advanced interactive workshop from leaders in the field of microbiome analysis. It will provide hands-on training in accessing cloud-based Human Microbiome Project data and utilizing Docker-based workflows to perform metagenome shotgun and 16S sequence analysis. Open source tools (e.g., HUMAnN, Qiime, MetaViz) will be utilized for multiple types of analyses including metabolic profiling, phylogenetic profiling, assembly, annotation, and data visualization. Attendees will leave the workshop with practical experience using a freely available Docker image they can take home and share with others or apply to their own studies.

Location: Baltimore, MD

More information: http://www.igs.umaryland.edu/topics/microbiome-cloud/


June 16, 2017

dkNET-NURSA Challenge Submission Deadline 

The Nuclear Receptor Signaling Atlas (NURSA) is partnering with the NIDDK Information Network (dkNET) to host a dataset challenge, and we invite you to join ! Everyone is talking about Big Data. How can we ensure that the impact of individual scientists working on a myriad of small and focused studies that discover and probe new phenomena - is not lost in the Big Data world. In fact, there is more than one way to generate big data and we would like your help in creating and expanding “big data” for NIDDK! AWARD: $50 VISA gift cards & $500 cash prize.

Registration: https://dknet.org/about/dknet-nursa-challenge


June 18-23, 2017

Gordon Research Conference: Exocrine and Endocrine Pancreas: Molecules to Human

Despite the rapid advances in our understanding of the molecular mechanisms involved in pancreatic development, regeneration, and malignant transformation, as well as our ability to model these processes in mice and recently also human cells, our ability to translate this knowledge into the clinical setting to benefit patients is still largely lacking. This relatively new GRC aims to link the understanding of the biology of the exocrine and endocrine pancreas to applications to human diseases. This GRC is unique in that it is the only conference that convenes experts from all aspects of pancreas biology as well as clinicians working on translational approaches for various pancreatic diseases, including pancreatic cancer, pancreatitis and diabetes. By providing a forum for the presentation and discussion of cutting edge, unpublished concepts and approaches, the goal of this GRC is to stimulate discussion across fields and disciplines. This exchange will foster interdisciplinary approaches in the field and promote exchange of ideas and experiences to lead to new collaborations, as well as empower young scientists to showcase their work to peers and leaders in the field.

Location: Waterville Valley, NH

More information: http://www.grc.org/programs.aspx?id=15836


June 29, 2017

5th Annual Duke O'Brien Center for Kidney Research Symposium 

Location: Durham, NC

More information: http://www.dukekidneycenter.org/education/dock-symposium


Funding opportunities information and deadlines in June, 2017

June 1, 2017 

Funding application quarterly deadline: MMPC MICROMouse Program

MICROMouse will fund high impact technology-, physiology-, or biology-based projects conceived through interaction with, or between MMPCs. Proposal objectives should take clear advantage of collaborations with MMPCs to address questions that would be otherwise difficult to answer. Objectives of the MICROMmouse initiative encompasses pilot and feasibility projects for the development of new mouse phenotyping tests, as well as research-driven projects that investigate biology and physiology of disease.The aim of the MICROMouse program is to promote the development of mouse phenotyping technology and encourage collaborative relationships between the MMPC and its users. These are 1 year awards intended to fund the development of research opportunities that may arise during the course of a service provided by the MMPC or to expand on research interests common to a MMPC user and a MMPC principal investigator. These awards cannot be used simply to purchase services from an MMPC. There is no formal deadline associated with MICROMouse applications, but applications will be reviewed quarterly (March 1, June 1, September 1, December 1) and so should be submitted accordingly. A letter of intent with a brief (2-3 sentences) description of the proposed project must be sent to Dr. Richard McIndoe at rmcindoe@gru.edu at least two weeks prior to submission of an application.

More information:  https://www.mmpc.org/shared/microMouse.aspx


June 1 , 2017 

Funding Opportunity Application Due Date: Nutrition Obesity Research Center At Harvard Pilot and Feasibility Project 

The overall goal of the Pilot and Feasibility Project (PFP) is to stimulate innovative research relevant to nutrition, metabolism, or obesity. We hope that this program will be a mechanism through the Center to encourage basic investigators to extend their studies into nutrition/obesity, often in collaboration with investigators in the Center and directly focused on clinical/translational problems. PFP recipients will receive preferential access to the Core facilities. Eligible applicants fall into one of 3 categories: (1) Early career investigators in nutrition, metabolism, or obesity; (2) established investigators new to the field of nutrition, metabolism or obesity research; or (3) established investigators in the field looking for funding for a new direction in nutrition, metabolism or obesity research. Investigators from any Harvard institution are eligible to apply. Per NIH rules, fellows are not allowed to be PI of these grants, but final-year fellows may apply if the grant would be awarded after completion of their fellowship. Applicants are encouraged to take advantage of our Core laboratories.

More information: http://www.norch.org/pilot-and-feasibility-grants


June 1, 2017 

Funding Opportunity Application Due Date: The Nutrition Obesity Research Center at University of California San Francisco Pilot and Feasibility Program 

The Nutrition Obesity Research Center (NORC) announces the 2017 RFA for Pilot and Feasibility Grants to provide pilot funding to pursue novel ideas broadly relevant to nutrition, obesity, and metabolism research. The NORC P&F Program is funded by NIDDK to support junior faculty and established investigators wishing to pursue new directions in NORC related research.

More information: http://norc.ucsf.edu/pandf

June 2, 2017 

Funding Opportunity Application Due Date: NIH Health Care Systems Research Collaboratory - Demonstration Projects for Pragmatic Clinical Trials (UG3/UH3) 

The purpose of this FOA is to solicit applications to support Demonstration Projects that include an efficient, large-scale pragmatic clinical trial. Trials must be conducted across two or more health care systems (HCS) and must be conducted as part of the NIH HCS Research Collaboratory supported through the NIH Common Fund. (See https://commonfund.nih.gov/hcscollaboratory). Awards made through this FOA will initially support a one-year milestone-driven planning phase (UG3), with possible rapid transition to the second implementation phase (UH3) for a pragmatic trial Demonstration Project. UH3s will be awarded after administrative review of eligible UG3s that have met the scientific milestone and feasibility requirements necessary for the UH3 implementation phase, depending on the availability of funds. The UG3/UH3 application must be submitted as a single application, and applicants should note specific instructions for each phase in this FOA.

More information: http://grants.nih.gov/grants/guide/rfa-files/RFA-RM-16-019.html

June 11, 2017 

Funding Opportunity Application Due Date: The New York Obesity Nutrition Research Center Pilot Feasibility Grant Program

Three types of applications will be considered: 1. Proposals from Assistant Professors or Postdoctoral Fellows currently transitioning to FACULTY STATUS to carry out preliminary studies to be used for an NIH grant application. Applicants with prior funding through this or similar programs, graduate students, or Postdoctoral Fellows (other than as above) are NOT eligible to apply; 2. Proposals for innovative/high-risk projects by established investigators in the field of obesity/ingestive behavior. Support for current research is NOT eligible; 3. Proposals from established investigators, without prior funding in obesity, who wish to undertake an obesity-related project.

More information: https://nyonrc.cumc.columbia.edu/content/pilot-feasibility-grant-program-announcement

June 12, 2017 

DiaComp Conference Support Program Application Deadline 

The goal of the NIDDK-sponsored Diabetic Complications Consortium (DiaComp) is to advance the study of diabetic complications and promote communication and collaboration between investigators involved in complications research by supporting scientific meetings and funding new research activities. Applications of 5 pages requesting up to $20,000 per conference are due June 12, 2017 for conferences with start dates after September 1, 2017 (i.e. conferences will be held between September 1, 2017 and August 31, 2018 .

More information: https://www.diacomp.org/shared/conferenceSupport.aspx


June 12, 2017 

DiaComp Pilot and Feasibility Program Application Deadline

This program solicits and funds small Pilot and Feasibility (P&F) projects in high impact areas of diabetic complications research that fall within the primary mission of the NIDDK (please see the NIDDK website for full details). NIDDK complications include diabetic nephropathy, uropathy, neuropathy, neurocognition, gastrointestinal, bone and wound healing. Applications focused on all other diabetic complications (including diabetic retinopathy and cardiovascular disease) do NOT fall within the primary mission of the NIDDK and will be deemed non-responsive. If an application proposes to study multiple diabetic complications, a majority of the proposal must address a DK complication of primary interest. This program aims to support discovery (hypothesis generating) and innovative (high risk/high reward) research that will advance our understanding of diabetic complications and is increasingly difficult to support through standard NIH mechanisms. Basic, translational and clinical research proposals are encouraged. When appropriate, the use of human samples is strongly encouraged. Research involving human subjects is limited to observational studies with non-invasive or minimally invasive testing and must have IRB approval that includes the collection and use of human samples for research purposes. Interventional clinical trials are beyond the scope of this program. Awards are expected to prepare the applicant(s) to submit a future investigator- initiated project (e.g. NIH R01). Lower priority will be given to applicants who have received DiaComp support in the past three years. Applications of 5 pages requesting up to $100,000 for one year are due June 12, 2017.

More information: https://www.diacomp.org/shared/pilotFeasibility.aspx

June 12, 2017 

Funding Opportunity Application Due Date: Washington University In St. Louis Nutrition Obesity Research Center

The major objective of this program is to provide research support to test innovative hypotheses involving nutrition/metabolism-related research. This research should involve some aspect of nutrient absorption, metabolism, or cell signaling or genetic aspects that are nutrition-related. It is hoped that a Pilot and Feasibility Award will generate enough preliminary data for the investigator to obtain research funding by conventional mechanisms (e.g., R01). We also hope this program will encourage young investigators and more established investigators in other fields to approach problems which are relevant to our understanding of nutrient metabolism and function and increase our understanding of the basic and clinical aspects of nutrition in the prevention, etiology, pathophysiology, and therapy of disease.

More information: https://gns.wustl.edu/research/nutrition-obesity-research-center/pilot-feasibility-program/

June 12, 2017 

Funding Opportunity Application Due Date: Washington University In St. Louis Nutrition Obesity Research Center

The major objective of this program is to provide research support to test innovative hypotheses involving nutrition/metabolism-related research. This research should involve some aspect of nutrient absorption, metabolism, or cell signaling or genetic aspects that are nutrition-related. It is hoped that a Pilot and Feasibility Award will generate enough preliminary data for the investigator to obtain research funding by conventional mechanisms (e.g., R01). We also hope this program will encourage young investigators and more established investigators in other fields to approach problems which are relevant to our understanding of nutrient metabolism and function and increase our understanding of the basic and clinical aspects of nutrition in the prevention, etiology, pathophysiology, and therapy of disease.

More information: https://gns.wustl.edu/research/nutrition-obesity-research-center/pilot-feasibility-program/


June 14, 2017 

Letter of Intent Due Date: Limited Competition: Data Coordinating Center for Type 1 Diabetes TrialNet (UC4)

This Funding Opportunity Announcement (FOA) invites an application from the Program Director/Principal Investigator of the Data Coordinating Center (DCC) that is currently supporting the research being performed by the complex and effective Type 1 Diabetes TrialNet network. This FOA will support the design and conduct of new-onset trials (as selected by the TrialNet Steering Committee) aimed at preservation of insulin-producing cells in individuals with new-onset diabetes.The DCC will support a wide range of research projects in varying stages of development, implementation and completion. The DCC will provide for data and sample management, including standardized acquisition, quality control, dissemination, and public accessibility.

More information: https://grants.nih.gov/grants/guide/rfa-files/RFA-DK-17-507.html

June 14, 2017 

Letter of Intent Due Date: Limited Competition: Follow-up on Subjects and Immunological Assessments in The Environmental Determinants of Diabetes In The Young Study (TEDDY) (UC4)

This Funding Opportunity Announcement (FOA) invites an application from the Program Director/Principal Investigator (PD/PI) of the current Data Coordinating Center (DCC) for The Environmental Determinants of Diabetes in the Young (TEDDY) study, an ongoing epidemiological study. This DCC has been involved in study design and data and biosample acquisition and management since the inception of the TEDDY Consortium. This FOA provides support for the TEDDY DCC to continue to follow TEDDY children, allowing collaborators to conduct further studies in the measurement and analysis of immune markers using samples from TEDDY subjects.

More information: https://grants.nih.gov/grants/guide/rfa-files/RFA-DK-17-508.html


June 19, 2017 

Funding Opportunity Application Deadline: Nuclear Receptor Signaling Atlas (NURSA) Hub: Consensome Validation NDSPs

The mission of the Nuclear Receptor Signaling Atlas (NURSA) Hub is to improve the accessibility and re-usability of publicly-archived datasets of relevance to the nuclear receptor (NR) signaling research community. To arrive at consensus physiological system- and organ-specific transcriptomic signatures of NR pathways, the NURSA Hub has added a new module to its Transcriptomine data analysis platform, called Consensome. In this feature, genes are ranked according to the frequency with which they are significantly differentially expressed in publicly archived datasets involving manipulation of a given NR pathway in a specific organ or physiological system. The rankings, or Consensomes, are available at https://www.nursa.org/nursa/transcriptomine/index.jsf. In addition to validating well-characterized NR target genes, many Consensomes contain highly ranked genes that represent potentially important, but currently underappreciated, transcriptional targets of NR signaling pathways. In this NDSP solicitation, we invite applications proposing bench validation of relationships between NR signaling pathways and gene(s) predicted by the Consensomes, but that are previously unpublished in the research literature.

More information: https://nursa.org/nursa/funding/ndsp_rfp.jsf

June 20, 2017 

Letter of Intent Due Date: Cystic Fibrosis Research and Translation Center (P30)

This Funding Opportunity Announcement (FOA) invites applications for Cystic Fibrosis (CF) Research and Translation Core Centers. CF Research and Translation Core Centers are designed to support both basic and clinical research on Cystic Fibrosis. CF Research and Translation Core Centers support three primary research-related activities: Research Core services; a Pilot and Feasibility program; and an Administrative Core with an enrichment program. Core Centers provide shared resources to support research to develop and test new therapies for CF and to foster collaborations among institutions with a strong existing research base in CF. The NIDDK currently supports seven CF Research and Translation Centers located at institutions with documented programs of research excellence in basic and clinical CF Research. Information about the currently funded CF Research and Translation Centers may be found at https://www.niddk.nih.gov/research-funding/research-programs/Pages/cystic-fibrosis-research-translation-centers.

More information: https://grants.nih.gov/grants/guide/rfa-files/RFA-DK-17-007.html

June 26, 2017 

Funding Opportunity Application Due Date: Mid-Atlantic Nutrition Obesity Research Center Pilot & Feasibility Program 

The aim of a P/F project is to provide convincing data for future proposals to the NIH or other national agencies. Investigators are encouraged


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